RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 MAGI1Q96QZ7 1491 aaPredicted RBP22.86■■□□□ 1.25
TRIM23-202ENST00000274327 EFCAB5A4FU69 1503 aa22.79■■□□□ 1.24
TRIM23-202ENST00000274327 SYNJ2O15056 1496 aa22.77■■□□□ 1.24
TRIM23-202ENST00000274327 GRIN2AQ12879 1464 aa22.77■■□□□ 1.24
TRIM23-202ENST00000274327 SAMD9Q5K651 1589 aa22.73■■□□□ 1.23
TRIM23-202ENST00000274327 TRIM26Q12899 539 aaPredicted RBP22.72■■□□□ 1.23
TRIM23-202ENST00000274327 IQGAP2Q13576 1575 aa22.71■■□□□ 1.23
TRIM23-202ENST00000274327 KIAA0586Q9BVV6 1533 aa22.66■■□□□ 1.22
TRIM23-202ENST00000274327 PPARGC1BQ86YN6 1023 aaKnown RBP22.66■■□□□ 1.22
TRIM23-202ENST00000274327 PCGF6Q9BYE7 350 aa22.66■■□□□ 1.22
TRIM23-202ENST00000274327 CHMP7Q8WUX9 453 aaPredicted RBP22.65■■□□□ 1.22
TRIM23-202ENST00000274327 CEP170Q5SW79 1584 aa22.64■■□□□ 1.21
TRIM23-202ENST00000274327 FHOD3Q2V2M9 1422 aa22.63■■□□□ 1.21
TRIM23-202ENST00000274327 UGGT2Q9NYU1 1516 aa22.63■■□□□ 1.21
TRIM23-202ENST00000274327 NUP160Q12769 1436 aa22.62■■□□□ 1.21
TRIM23-202ENST00000274327 P3H3Q8IVL6 736 aa22.59■■□□□ 1.21
TRIM23-202ENST00000274327 PCF11O94913 1555 aaKnown RBP22.57■■□□□ 1.2
TRIM23-202ENST00000274327 APLP2Q06481 763 aa22.57■■□□□ 1.2
TRIM23-202ENST00000274327 CHD1O14646 1710 aa22.55■■□□□ 1.2
TRIM23-202ENST00000274327 FMN1Q68DA7 1419 aa22.55■■□□□ 1.2
TRIM23-202ENST00000274327 FBLN2P98095 1184 aa22.54■■□□□ 1.2
TRIM23-202ENST00000274327 MAP3K1Q13233 1512 aa22.54■■□□□ 1.2
TRIM23-202ENST00000274327 CASKIN1Q8WXD9 1431 aa22.52■■□□□ 1.2
TRIM23-202ENST00000274327 FYCO1Q9BQS8 1478 aa22.52■■□□□ 1.2
TRIM23-202ENST00000274327 KIAA0556O60303 1618 aa22.5■■□□□ 1.19
TRIM23-202ENST00000274327 DISP1Q96F81 1524 aa22.49■■□□□ 1.19
TRIM23-202ENST00000274327 TIAM1Q13009 1591 aa22.49■■□□□ 1.19
TRIM23-202ENST00000274327 CFAP43Q8NDM7 1665 aa22.47■■□□□ 1.19
TRIM23-202ENST00000274327 TTBK1Q5TCY1 1321 aaPredicted RBP22.46■■□□□ 1.19
TRIM23-202ENST00000274327 KANK4Q5T7N3 995 aaPredicted RBP22.43■■□□□ 1.18
TRIM23-202ENST00000274327 JPH4Q96JJ6 628 aa22.39■■□□□ 1.17
TRIM23-202ENST00000274327 LRRIQ1Q96JM4 1722 aa22.39■■□□□ 1.17
TRIM23-202ENST00000274327 LRRC9Q6ZRR7 1453 aa22.36■■□□□ 1.17
TRIM23-202ENST00000274327 CARMIL2Q6F5E8 1435 aa22.35■■□□□ 1.17
TRIM23-202ENST00000274327 SHROOM2Q13796 1616 aa22.34■■□□□ 1.17
TRIM23-202ENST00000274327 HECW1Q76N89 1606 aa22.34■■□□□ 1.17
TRIM23-202ENST00000274327 ATP1B4Q9UN42 357 aaPredicted RBP22.31■■□□□ 1.16
TRIM23-202ENST00000274327 CLASP1Q7Z460 1538 aa22.31■■□□□ 1.16
TRIM23-202ENST00000274327 CCDC18Q5T9S5 1454 aa22.29■■□□□ 1.16
TRIM23-202ENST00000274327 RAPGEF6Q8TEU7 1601 aa22.28■■□□□ 1.16
TRIM23-202ENST00000274327 PRG4Q92954 1404 aaPredicted RBP22.26■■□□□ 1.15
TRIM23-202ENST00000274327 EPRSP07814 1512 aaKnown RBP22.24■■□□□ 1.15
TRIM23-202ENST00000274327 RRBP1Q9P2E9 1410 aaKnown RBP22.22■■□□□ 1.15
TRIM23-202ENST00000274327 NUP153P49790 1475 aaKnown RBP22.21■■□□□ 1.15
TRIM23-202ENST00000274327 EHBP1L1Q8N3D4 1523 aa22.19■■□□□ 1.14
TRIM23-202ENST00000274327 ABCA8O94911 1581 aa22.19■■□□□ 1.14
TRIM23-202ENST00000274327 PLB1Q6P1J6 1458 aa22.18■■□□□ 1.14
TRIM23-202ENST00000274327 CDK13Q14004 1512 aaKnown RBP22.17■■□□□ 1.14
TRIM23-202ENST00000274327 MAGI3Q5TCQ9 1506 aa22.17■■□□□ 1.14
TRIM23-202ENST00000274327 MTUS2Q5JR59 1369 aa22.16■■□□□ 1.14
TRIM23-202ENST00000274327 PHLDB1Q86UU1 1377 aa22.15■■□□□ 1.14
TRIM23-202ENST00000274327 ERCC6L2Q5T890 1561 aa22.14■■□□□ 1.14
TRIM23-202ENST00000274327 SUPT6HQ7KZ85 1726 aaKnown RBP22.13■■□□□ 1.13
TRIM23-202ENST00000274327 PTPRGP23470 1445 aa22.12■■□□□ 1.13
TRIM23-202ENST00000274327 CCNB3Q8WWL7 1395 aa22.11■■□□□ 1.13
TRIM23-202ENST00000274327 ARHGEF11O15085 1522 aa22.1■■□□□ 1.13
TRIM23-202ENST00000274327 NCOA2Q15596 1464 aa22.08■■□□□ 1.13
TRIM23-202ENST00000274327 HRCP23327 699 aa22.03■■□□□ 1.12
TRIM23-202ENST00000274327 ARID3CA6NKF2 412 aa22.03■■□□□ 1.12
TRIM23-202ENST00000274327 UACAQ9BZF9 1416 aa22.02■■□□□ 1.11
TRIM23-202ENST00000274327 HNRNPUL2Q1KMD3 747 aaKnown RBP22.01■■□□□ 1.11
TRIM23-202ENST00000274327 ATP10BO94823 1461 aa22.01■■□□□ 1.11
TRIM23-202ENST00000274327 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22■■□□□ 1.11
TRIM23-202ENST00000274327 OSCARQ8IYS5 282 aa22■■□□□ 1.11
TRIM23-202ENST00000274327 MYOM3Q5VTT5 1437 aa22■■□□□ 1.11
TRIM23-202ENST00000274327 FGD6Q6ZV73 1430 aa22■■□□□ 1.11
TRIM23-202ENST00000274327 CDK11AQ9UQ88 783 aaPredicted RBP21.99■■□□□ 1.11
TRIM23-202ENST00000274327 TROQ12816 1431 aaPredicted RBP21.98■■□□□ 1.11
TRIM23-202ENST00000274327 ADCY10Q96PN6 1610 aa21.98■■□□□ 1.11
TRIM23-202ENST00000274327 ABCC2Q92887 1545 aa21.97■■□□□ 1.11
TRIM23-202ENST00000274327 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.95■■□□□ 1.1
TRIM23-202ENST00000274327 UHRF1BP1LA0JNW5 1464 aa21.93■■□□□ 1.1
TRIM23-202ENST00000274327 PTPN23Q9H3S7 1636 aa21.9■■□□□ 1.1
TRIM23-202ENST00000274327 TCOF1Q13428 1488 aaKnown RBP21.9■■□□□ 1.1
TRIM23-202ENST00000274327 MIA2Q96PC5 1412 aa21.89■■□□□ 1.09
TRIM23-202ENST00000274327 FAM50AQ14320 339 aaKnown RBP21.89■■□□□ 1.09
TRIM23-202ENST00000274327 KIF14Q15058 1648 aa21.89■■□□□ 1.09
TRIM23-202ENST00000274327 PLEKHD1A6NEE1 506 aa21.86■■□□□ 1.09
TRIM23-202ENST00000274327 KDM5BQ9UGL1 1544 aa21.83■■□□□ 1.09
TRIM23-202ENST00000274327 ITSN2Q9NZM3 1697 aa21.83■■□□□ 1.09
TRIM23-202ENST00000274327 ZCCHC11Q5TAX3 1644 aaKnown RBP21.83■■□□□ 1.08
TRIM23-202ENST00000274327 ABCC10Q5T3U5 1492 aa21.83■■□□□ 1.08
TRIM23-202ENST00000274327 ITGAEP38570 1179 aa21.81■■□□□ 1.08
TRIM23-202ENST00000274327 GPATCH8Q9UKJ3 1502 aaKnown RBP21.79■■□□□ 1.08
TRIM23-202ENST00000274327 ZEB1P37275 1124 aaPredicted RBP21.79■■□□□ 1.08
TRIM23-202ENST00000274327 CCER1Q8TC90 406 aaPredicted RBP21.78■■□□□ 1.08
TRIM23-202ENST00000274327 CDC42BPAQ5VT25 1732 aa21.78■■□□□ 1.08
TRIM23-202ENST00000274327 PTPRKQ15262 1439 aa21.75■■□□□ 1.07
TRIM23-202ENST00000274327 SETD5Q9C0A6 1442 aa21.72■■□□□ 1.07
TRIM23-202ENST00000274327 DNMT1P26358 1616 aaKnown RBP21.7■■□□□ 1.06
TRIM23-202ENST00000274327 RAB3GAP2Q9H2M9 1393 aa21.69■■□□□ 1.06
TRIM23-202ENST00000274327 CAMSAP2Q08AD1 1489 aa21.69■■□□□ 1.06
TRIM23-202ENST00000274327 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.68■■□□□ 1.06
TRIM23-202ENST00000274327 PREX2Q70Z35 1606 aa21.68■■□□□ 1.06
TRIM23-202ENST00000274327 CFDP1Q9UEE9 299 aaPredicted RBP21.68■■□□□ 1.06
TRIM23-202ENST00000274327 TTC37Q6PGP7 1564 aa21.67■■□□□ 1.06
TRIM23-202ENST00000274327 CDC42BPBQ9Y5S2 1711 aa21.66■■□□□ 1.06
TRIM23-202ENST00000274327 ZNF644Q9H582 1327 aaPredicted RBP21.65■■□□□ 1.06
TRIM23-202ENST00000274327 HFM1A2PYH4 1435 aa21.65■■□□□ 1.06
TRIM23-202ENST00000274327 DAPK1P53355 1430 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms