RNA–Protein interactions for RNA: ENST00000269471.9

MBD1-202, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MBD1, Length 2,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-202ENST00000269471 ACIN1Q9UKV3 1341 aaKnown RBP24.34■■□□□ 1.49
MBD1-202ENST00000269471 ZNF608Q9ULD9 1512 aaPredicted RBP24.34■■□□□ 1.49
MBD1-202ENST00000269471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.33■■□□□ 1.49
MBD1-202ENST00000269471 ABCA5Q8WWZ7 1642 aa24.31■■□□□ 1.48
MBD1-202ENST00000269471 HNRNPUL2Q1KMD3 747 aaKnown RBP24.28■■□□□ 1.48
MBD1-202ENST00000269471 CCER1Q8TC90 406 aaPredicted RBP24.24■■□□□ 1.47
MBD1-202ENST00000269471 FHOD3Q2V2M9 1422 aa24.23■■□□□ 1.47
MBD1-202ENST00000269471 WDR62O43379 1518 aa24.23■■□□□ 1.47
MBD1-202ENST00000269471 CUL7Q14999 1698 aa24.23■■□□□ 1.47
MBD1-202ENST00000269471 FBLN2P98095 1184 aa24.18■■□□□ 1.46
MBD1-202ENST00000269471 GTF3C3Q9Y5Q9 886 aa24.18■■□□□ 1.46
MBD1-202ENST00000269471 IFT140Q96RY7 1462 aa24.17■■□□□ 1.46
MBD1-202ENST00000269471 THOC2Q8NI27 1593 aaKnown RBP24.13■■□□□ 1.45
MBD1-202ENST00000269471 PBRM1Q86U86 1689 aa24.11■■□□□ 1.45
MBD1-202ENST00000269471 GRIN2BQ13224 1484 aa24.11■■□□□ 1.45
MBD1-202ENST00000269471 DIEXFQ68CQ4 756 aaKnown RBP24.11■■□□□ 1.45
MBD1-202ENST00000269471 FHAD1B1AJZ9 1412 aa24.09■■□□□ 1.45
MBD1-202ENST00000269471 CTTNBP2Q8WZ74 1663 aa24.06■■□□□ 1.44
MBD1-202ENST00000269471 SNAPC4Q5SXM2 1469 aa24.06■■□□□ 1.44
MBD1-202ENST00000269471 CENPBP07199 599 aaPredicted RBP24.06■■□□□ 1.44
MBD1-202ENST00000269471 ARID3CA6NKF2 412 aa24.05■■□□□ 1.44
MBD1-202ENST00000269471 ITGAEP38570 1179 aa24.05■■□□□ 1.44
MBD1-202ENST00000269471 EIF4G3O43432 1585 aaKnown RBP24.03■■□□□ 1.44
MBD1-202ENST00000269471 CHMP7Q8WUX9 453 aaPredicted RBP24.03■■□□□ 1.44
MBD1-202ENST00000269471 ADAMTS12P58397 1594 aa24.01■■□□□ 1.43
MBD1-202ENST00000269471 PCF11O94913 1555 aaKnown RBP23.99■■□□□ 1.43
MBD1-202ENST00000269471 EFCAB5A4FU69 1503 aa23.92■■□□□ 1.42
MBD1-202ENST00000269471 TIAM1Q13009 1591 aa23.91■■□□□ 1.42
MBD1-202ENST00000269471 GRIN2AQ12879 1464 aa23.87■■□□□ 1.41
MBD1-202ENST00000269471 LRRC9Q6ZRR7 1453 aa23.87■■□□□ 1.41
MBD1-202ENST00000269471 FMN1Q68DA7 1419 aa23.87■■□□□ 1.41
MBD1-202ENST00000269471 IQGAP2Q13576 1575 aa23.86■■□□□ 1.41
MBD1-202ENST00000269471 CASKIN1Q8WXD9 1431 aa23.86■■□□□ 1.41
MBD1-202ENST00000269471 MYT1Q01538 1121 aa23.85■■□□□ 1.41
MBD1-202ENST00000269471 FAM50AQ14320 339 aaKnown RBP23.85■■□□□ 1.41
MBD1-202ENST00000269471 SAMD9Q5K651 1589 aa23.84■■□□□ 1.41
MBD1-202ENST00000269471 PHLDB1Q86UU1 1377 aa23.84■■□□□ 1.41
MBD1-202ENST00000269471 FYCO1Q9BQS8 1478 aa23.81■■□□□ 1.4
MBD1-202ENST00000269471 CCNB3Q8WWL7 1395 aa23.81■■□□□ 1.4
MBD1-202ENST00000269471 YTHDC1Q96MU7 727 aaKnown RBP23.8■■□□□ 1.4
MBD1-202ENST00000269471 SYNJ2O15056 1496 aa23.78■■□□□ 1.4
MBD1-202ENST00000269471 MAGI1Q96QZ7 1491 aaPredicted RBP23.78■■□□□ 1.4
MBD1-202ENST00000269471 MTUS2Q5JR59 1369 aa23.76■■□□□ 1.39
MBD1-202ENST00000269471 KIAA0586Q9BVV6 1533 aa23.76■■□□□ 1.39
MBD1-202ENST00000269471 RRBP1Q9P2E9 1410 aaKnown RBP23.75■■□□□ 1.39
MBD1-202ENST00000269471 CEP170Q5SW79 1584 aa23.73■■□□□ 1.39
MBD1-202ENST00000269471 JPH4Q96JJ6 628 aa23.73■■□□□ 1.39
MBD1-202ENST00000269471 MAP3K1Q13233 1512 aa23.72■■□□□ 1.39
MBD1-202ENST00000269471 CFAP43Q8NDM7 1665 aa23.7■■□□□ 1.38
MBD1-202ENST00000269471 DISP1Q96F81 1524 aa23.7■■□□□ 1.38
MBD1-202ENST00000269471 LRRIQ1Q96JM4 1722 aa23.69■■□□□ 1.38
MBD1-202ENST00000269471 ZNF316A6NFI3 1004 aaPredicted RBP23.67■■□□□ 1.38
MBD1-202ENST00000269471 UGGT2Q9NYU1 1516 aa23.66■■□□□ 1.38
MBD1-202ENST00000269471 CDK13Q14004 1512 aaKnown RBP23.65■■□□□ 1.38
MBD1-202ENST00000269471 KIAA0556O60303 1618 aa23.61■■□□□ 1.37
MBD1-202ENST00000269471 MAGI3Q5TCQ9 1506 aa23.6■■□□□ 1.37
MBD1-202ENST00000269471 NUP160Q12769 1436 aa23.59■■□□□ 1.37
MBD1-202ENST00000269471 EPRSP07814 1512 aaKnown RBP23.58■■□□□ 1.36
MBD1-202ENST00000269471 PLB1Q6P1J6 1458 aa23.56■■□□□ 1.36
MBD1-202ENST00000269471 NCOA2Q15596 1464 aa23.55■■□□□ 1.36
MBD1-202ENST00000269471 MIER1Q8N108 512 aa23.55■■□□□ 1.36
MBD1-202ENST00000269471 HECW1Q76N89 1606 aa23.51■■□□□ 1.35
MBD1-202ENST00000269471 FGD6Q6ZV73 1430 aa23.5■■□□□ 1.35
MBD1-202ENST00000269471 RAB3GAP2Q9H2M9 1393 aa23.5■■□□□ 1.35
MBD1-202ENST00000269471 NUP153P49790 1475 aaKnown RBP23.49■■□□□ 1.35
MBD1-202ENST00000269471 CARMIL2Q6F5E8 1435 aa23.49■■□□□ 1.35
MBD1-202ENST00000269471 DHX57Q6P158 1386 aaKnown RBP23.49■■□□□ 1.35
MBD1-202ENST00000269471 PRG4Q92954 1404 aaPredicted RBP23.48■■□□□ 1.35
MBD1-202ENST00000269471 CHIC2Q9UKJ5 165 aa23.48■■□□□ 1.35
MBD1-202ENST00000269471 CCDC18Q5T9S5 1454 aa23.47■■□□□ 1.35
MBD1-202ENST00000269471 CHD1O14646 1710 aa23.47■■□□□ 1.35
MBD1-202ENST00000269471 EHBP1L1Q8N3D4 1523 aa23.43■■□□□ 1.34
MBD1-202ENST00000269471 MYOM3Q5VTT5 1437 aa23.43■■□□□ 1.34
MBD1-202ENST00000269471 RAPGEF6Q8TEU7 1601 aa23.42■■□□□ 1.34
MBD1-202ENST00000269471 SUPT6HQ7KZ85 1726 aaKnown RBP23.41■■□□□ 1.34
MBD1-202ENST00000269471 PTPRKQ15262 1439 aa23.41■■□□□ 1.34
MBD1-202ENST00000269471 ZNF644Q9H582 1327 aaPredicted RBP23.4■■□□□ 1.34
MBD1-202ENST00000269471 SETD5Q9C0A6 1442 aa23.39■■□□□ 1.34
MBD1-202ENST00000269471 RRP7BPQ9NSQ0 103 aa23.37■■□□□ 1.33
MBD1-202ENST00000269471 CDK11AQ9UQ88 783 aaPredicted RBP23.37■■□□□ 1.33
MBD1-202ENST00000269471 ZNF777Q9ULD5 760 aaPredicted RBP23.36■■□□□ 1.33
MBD1-202ENST00000269471 PTPRGP23470 1445 aa23.36■■□□□ 1.33
MBD1-202ENST00000269471 ERCC6L2Q5T890 1561 aa23.34■■□□□ 1.33
MBD1-202ENST00000269471 ARHGEF11O15085 1522 aa23.3■■□□□ 1.32
MBD1-202ENST00000269471 PTPN23Q9H3S7 1636 aa23.29■■□□□ 1.32
MBD1-202ENST00000269471 PLEKHD1A6NEE1 506 aa23.28■■□□□ 1.32
MBD1-202ENST00000269471 SIN3AQ96ST3 1273 aa23.28■■□□□ 1.32
MBD1-202ENST00000269471 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.26■■□□□ 1.31
MBD1-202ENST00000269471 ATP10BO94823 1461 aa23.25■■□□□ 1.31
MBD1-202ENST00000269471 CFDP1Q9UEE9 299 aaPredicted RBP23.24■■□□□ 1.31
MBD1-202ENST00000269471 TROQ12816 1431 aaPredicted RBP23.23■■□□□ 1.31
MBD1-202ENST00000269471 KIF14Q15058 1648 aa23.21■■□□□ 1.31
MBD1-202ENST00000269471 ABCA8O94911 1581 aa23.21■■□□□ 1.31
MBD1-202ENST00000269471 KCNH8Q96L42 1107 aa23.19■■□□□ 1.3
MBD1-202ENST00000269471 MAPKBP1O60336 1514 aa23.17■■□□□ 1.3
MBD1-202ENST00000269471 NAIPQ13075 1403 aa23.16■■□□□ 1.3
MBD1-202ENST00000269471 TRIM52Q96A61 297 aa23.16■■□□□ 1.3
MBD1-202ENST00000269471 CLSPNQ9HAW4 1339 aa23.15■■□□□ 1.3
MBD1-202ENST00000269471 MIA2Q96PC5 1412 aa23.14■■□□□ 1.3
MBD1-202ENST00000269471 UACAQ9BZF9 1416 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms