RNA–Protein interactions for RNA: ENST00000262580.8

GSDMD-201, Transcript of gasdermin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,762 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-201ENST00000262580 GRIN2AQ12879 1464 aa29.05■■■□□ 2.24
GSDMD-201ENST00000262580 SYNJ2O15056 1496 aa29.05■■■□□ 2.24
GSDMD-201ENST00000262580 VPS8Q8N3P4 1428 aa29.04■■■□□ 2.24
GSDMD-201ENST00000262580 EFCAB5A4FU69 1503 aa28.96■■■□□ 2.23
GSDMD-201ENST00000262580 IQGAP2Q13576 1575 aa28.95■■■□□ 2.22
GSDMD-201ENST00000262580 CHMP7Q8WUX9 453 aaPredicted RBP28.93■■■□□ 2.22
GSDMD-201ENST00000262580 CEP170Q5SW79 1584 aa28.91■■■□□ 2.22
GSDMD-201ENST00000262580 SAMD9Q5K651 1589 aa28.91■■■□□ 2.22
GSDMD-201ENST00000262580 FBLN2P98095 1184 aa28.88■■■□□ 2.21
GSDMD-201ENST00000262580 KIAA0586Q9BVV6 1533 aa28.86■■■□□ 2.21
GSDMD-201ENST00000262580 FHOD3Q2V2M9 1422 aa28.85■■■□□ 2.21
GSDMD-201ENST00000262580 CHD1O14646 1710 aa28.85■■■□□ 2.21
GSDMD-201ENST00000262580 PPARGC1BQ86YN6 1023 aaKnown RBP28.85■■■□□ 2.21
GSDMD-201ENST00000262580 NUP160Q12769 1436 aa28.84■■■□□ 2.21
GSDMD-201ENST00000262580 P3H3Q8IVL6 736 aa28.83■■■□□ 2.21
GSDMD-201ENST00000262580 UGGT2Q9NYU1 1516 aa28.79■■■□□ 2.2
GSDMD-201ENST00000262580 PCF11O94913 1555 aaKnown RBP28.73■■■□□ 2.19
GSDMD-201ENST00000262580 KIAA0556O60303 1618 aa28.68■■■□□ 2.18
GSDMD-201ENST00000262580 DISP1Q96F81 1524 aa28.67■■■□□ 2.18
GSDMD-201ENST00000262580 TRIM26Q12899 539 aaPredicted RBP28.67■■■□□ 2.18
GSDMD-201ENST00000262580 PCGF6Q9BYE7 350 aa28.67■■■□□ 2.18
GSDMD-201ENST00000262580 TTBK1Q5TCY1 1321 aaPredicted RBP28.66■■■□□ 2.18
GSDMD-201ENST00000262580 APLP2Q06481 763 aa28.66■■■□□ 2.18
GSDMD-201ENST00000262580 FMN1Q68DA7 1419 aa28.65■■■□□ 2.18
GSDMD-201ENST00000262580 FYCO1Q9BQS8 1478 aa28.62■■■□□ 2.17
GSDMD-201ENST00000262580 CASKIN1Q8WXD9 1431 aa28.61■■■□□ 2.17
GSDMD-201ENST00000262580 TIAM1Q13009 1591 aa28.57■■■□□ 2.16
GSDMD-201ENST00000262580 CFAP43Q8NDM7 1665 aa28.56■■■□□ 2.16
GSDMD-201ENST00000262580 JPH4Q96JJ6 628 aa28.55■■■□□ 2.16
GSDMD-201ENST00000262580 MAP3K1Q13233 1512 aa28.53■■■□□ 2.16
GSDMD-201ENST00000262580 LRRIQ1Q96JM4 1722 aa28.51■■■□□ 2.15
GSDMD-201ENST00000262580 KANK4Q5T7N3 995 aaPredicted RBP28.5■■■□□ 2.15
GSDMD-201ENST00000262580 SHROOM2Q13796 1616 aa28.49■■■□□ 2.15
GSDMD-201ENST00000262580 CLASP1Q7Z460 1538 aa28.48■■■□□ 2.15
GSDMD-201ENST00000262580 ATP1B4Q9UN42 357 aaPredicted RBP28.48■■■□□ 2.15
GSDMD-201ENST00000262580 CARMIL2Q6F5E8 1435 aa28.48■■■□□ 2.15
GSDMD-201ENST00000262580 HECW1Q76N89 1606 aa28.43■■■□□ 2.14
GSDMD-201ENST00000262580 PRG4Q92954 1404 aaPredicted RBP28.42■■■□□ 2.14
GSDMD-201ENST00000262580 LRRC9Q6ZRR7 1453 aa28.41■■■□□ 2.14
GSDMD-201ENST00000262580 RAPGEF6Q8TEU7 1601 aa28.37■■■□□ 2.13
GSDMD-201ENST00000262580 CCDC18Q5T9S5 1454 aa28.33■■■□□ 2.13
GSDMD-201ENST00000262580 ERCC6L2Q5T890 1561 aa28.33■■■□□ 2.13
GSDMD-201ENST00000262580 EPRSP07814 1512 aaKnown RBP28.31■■■□□ 2.12
GSDMD-201ENST00000262580 PLB1Q6P1J6 1458 aa28.3■■■□□ 2.12
GSDMD-201ENST00000262580 NUP153P49790 1475 aaKnown RBP28.29■■■□□ 2.12
GSDMD-201ENST00000262580 CDK13Q14004 1512 aaKnown RBP28.29■■■□□ 2.12
GSDMD-201ENST00000262580 ABCA8O94911 1581 aa28.25■■■□□ 2.11
GSDMD-201ENST00000262580 MAGI3Q5TCQ9 1506 aa28.23■■■□□ 2.11
GSDMD-201ENST00000262580 EHBP1L1Q8N3D4 1523 aa28.21■■■□□ 2.11
GSDMD-201ENST00000262580 ARID3CA6NKF2 412 aa28.21■■■□□ 2.11
GSDMD-201ENST00000262580 PTPRGP23470 1445 aa28.21■■■□□ 2.11
GSDMD-201ENST00000262580 MTUS2Q5JR59 1369 aa28.2■■■□□ 2.11
GSDMD-201ENST00000262580 RRBP1Q9P2E9 1410 aaKnown RBP28.15■■■□□ 2.1
GSDMD-201ENST00000262580 PHLDB1Q86UU1 1377 aa28.15■■■□□ 2.1
GSDMD-201ENST00000262580 OSCARQ8IYS5 282 aa28.14■■■□□ 2.1
GSDMD-201ENST00000262580 SUPT6HQ7KZ85 1726 aaKnown RBP28.13■■■□□ 2.09
GSDMD-201ENST00000262580 NCOA2Q15596 1464 aa28.08■■■□□ 2.09
GSDMD-201ENST00000262580 UACAQ9BZF9 1416 aa28.07■■■□□ 2.08
GSDMD-201ENST00000262580 ARHGEF11O15085 1522 aa28.06■■■□□ 2.08
GSDMD-201ENST00000262580 CCNB3Q8WWL7 1395 aa28.05■■■□□ 2.08
GSDMD-201ENST00000262580 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.04■■■□□ 2.08
GSDMD-201ENST00000262580 HNRNPUL2Q1KMD3 747 aaKnown RBP28.04■■■□□ 2.08
GSDMD-201ENST00000262580 ATP10BO94823 1461 aa28.03■■■□□ 2.08
GSDMD-201ENST00000262580 ABCC2Q92887 1545 aa28.02■■■□□ 2.08
GSDMD-201ENST00000262580 TROQ12816 1431 aaPredicted RBP27.97■■■□□ 2.07
GSDMD-201ENST00000262580 CDK11AQ9UQ88 783 aaPredicted RBP27.96■■■□□ 2.07
GSDMD-201ENST00000262580 MYOM3Q5VTT5 1437 aa27.95■■■□□ 2.07
GSDMD-201ENST00000262580 FGD6Q6ZV73 1430 aa27.94■■■□□ 2.06
GSDMD-201ENST00000262580 ADCY10Q96PN6 1610 aa27.94■■■□□ 2.06
GSDMD-201ENST00000262580 UHRF1BP1LA0JNW5 1464 aa27.92■■■□□ 2.06
GSDMD-201ENST00000262580 KIF14Q15058 1648 aa27.92■■■□□ 2.06
GSDMD-201ENST00000262580 ZCCHC11Q5TAX3 1644 aaKnown RBP27.86■■■□□ 2.05
GSDMD-201ENST00000262580 FAM50AQ14320 339 aaKnown RBP27.85■■■□□ 2.05
GSDMD-201ENST00000262580 PTPN23Q9H3S7 1636 aa27.85■■■□□ 2.05
GSDMD-201ENST00000262580 PLEKHD1A6NEE1 506 aa27.83■■■□□ 2.05
GSDMD-201ENST00000262580 KDM5BQ9UGL1 1544 aa27.83■■■□□ 2.05
GSDMD-201ENST00000262580 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.83■■■□□ 2.05
GSDMD-201ENST00000262580 ITGAEP38570 1179 aa27.8■■■□□ 2.04
GSDMD-201ENST00000262580 ITSN2Q9NZM3 1697 aa27.78■■■□□ 2.04
GSDMD-201ENST00000262580 TCOF1Q13428 1488 aaKnown RBP27.77■■■□□ 2.04
GSDMD-201ENST00000262580 MIA2Q96PC5 1412 aa27.77■■■□□ 2.04
GSDMD-201ENST00000262580 ABCC10Q5T3U5 1492 aa27.76■■■□□ 2.03
GSDMD-201ENST00000262580 GPATCH8Q9UKJ3 1502 aaKnown RBP27.73■■■□□ 2.03
GSDMD-201ENST00000262580 CDC42BPAQ5VT25 1732 aa27.72■■■□□ 2.03
GSDMD-201ENST00000262580 HRCP23327 699 aa27.72■■■□□ 2.03
GSDMD-201ENST00000262580 RIMBP3CA6NJZ7 1639 aa27.67■■■□□ 2.02
GSDMD-201ENST00000262580 RIMBP3BA6NNM3 1639 aa27.67■■■□□ 2.02
GSDMD-201ENST00000262580 RIMBP3Q9UFD9 1639 aa27.67■■■□□ 2.02
GSDMD-201ENST00000262580 TTC37Q6PGP7 1564 aa27.66■■■□□ 2.02
GSDMD-201ENST00000262580 PTPRKQ15262 1439 aa27.64■■■□□ 2.02
GSDMD-201ENST00000262580 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.64■■■□□ 2.01
GSDMD-201ENST00000262580 PREX2Q70Z35 1606 aa27.62■■■□□ 2.01
GSDMD-201ENST00000262580 CAMSAP2Q08AD1 1489 aa27.61■■■□□ 2.01
GSDMD-201ENST00000262580 CFDP1Q9UEE9 299 aaPredicted RBP27.6■■■□□ 2.01
GSDMD-201ENST00000262580 ZNF644Q9H582 1327 aaPredicted RBP27.59■■■□□ 2.01
GSDMD-201ENST00000262580 CDC42BPBQ9Y5S2 1711 aa27.58■■■□□ 2.01
GSDMD-201ENST00000262580 WDR7Q9Y4E6 1490 aa27.58■■■□□ 2.01
GSDMD-201ENST00000262580 DNMT1P26358 1616 aaKnown RBP27.57■■■□□ 2
GSDMD-201ENST00000262580 CCER1Q8TC90 406 aaPredicted RBP27.57■■■□□ 2
GSDMD-201ENST00000262580 MYO5CQ9NQX4 1742 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms