RNA–Protein interactions for RNA: ENST00000262428.4

COTL1-201, Transcript of coactosin like F-actin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COTL1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-201ENST00000262428 CHMP7Q8WUX9 453 aaPredicted RBP26.18■■□□□ 1.78
COTL1-201ENST00000262428 ARHGAP35Q9NRY4 1499 aa26.17■■□□□ 1.78
COTL1-201ENST00000262428 ARAP1Q96P48 1450 aa26.14■■□□□ 1.77
COTL1-201ENST00000262428 FBLN2P98095 1184 aa26.12■■□□□ 1.77
COTL1-201ENST00000262428 VPS8Q8N3P4 1428 aa26.09■■□□□ 1.77
COTL1-201ENST00000262428 IQGAP2Q13576 1575 aa26.08■■□□□ 1.77
COTL1-201ENST00000262428 KIAA0586Q9BVV6 1533 aa26.07■■□□□ 1.76
COTL1-201ENST00000262428 CEP170Q5SW79 1584 aa26.07■■□□□ 1.76
COTL1-201ENST00000262428 EFCAB5A4FU69 1503 aa26.06■■□□□ 1.76
COTL1-201ENST00000262428 NUP160Q12769 1436 aa26.05■■□□□ 1.76
COTL1-201ENST00000262428 CHD1O14646 1710 aa26.04■■□□□ 1.76
COTL1-201ENST00000262428 SAMD9Q5K651 1589 aa26.02■■□□□ 1.76
COTL1-201ENST00000262428 P3H3Q8IVL6 736 aa25.99■■□□□ 1.75
COTL1-201ENST00000262428 UGGT2Q9NYU1 1516 aa25.98■■□□□ 1.75
COTL1-201ENST00000262428 FHOD3Q2V2M9 1422 aa25.95■■□□□ 1.74
COTL1-201ENST00000262428 DISP1Q96F81 1524 aa25.85■■□□□ 1.73
COTL1-201ENST00000262428 PPARGC1BQ86YN6 1023 aaKnown RBP25.85■■□□□ 1.73
COTL1-201ENST00000262428 JPH4Q96JJ6 628 aa25.85■■□□□ 1.73
COTL1-201ENST00000262428 KIAA0556O60303 1618 aa25.82■■□□□ 1.72
COTL1-201ENST00000262428 FMN1Q68DA7 1419 aa25.82■■□□□ 1.72
COTL1-201ENST00000262428 APLP2Q06481 763 aa25.79■■□□□ 1.72
COTL1-201ENST00000262428 PCF11O94913 1555 aaKnown RBP25.79■■□□□ 1.72
COTL1-201ENST00000262428 CASKIN1Q8WXD9 1431 aa25.77■■□□□ 1.72
COTL1-201ENST00000262428 FYCO1Q9BQS8 1478 aa25.74■■□□□ 1.71
COTL1-201ENST00000262428 CLASP1Q7Z460 1538 aa25.74■■□□□ 1.71
COTL1-201ENST00000262428 CARMIL2Q6F5E8 1435 aa25.74■■□□□ 1.71
COTL1-201ENST00000262428 SHROOM2Q13796 1616 aa25.73■■□□□ 1.71
COTL1-201ENST00000262428 TRIM26Q12899 539 aaPredicted RBP25.7■■□□□ 1.71
COTL1-201ENST00000262428 MAP3K1Q13233 1512 aa25.7■■□□□ 1.7
COTL1-201ENST00000262428 PRG4Q92954 1404 aaPredicted RBP25.69■■□□□ 1.7
COTL1-201ENST00000262428 ATP1B4Q9UN42 357 aaPredicted RBP25.67■■□□□ 1.7
COTL1-201ENST00000262428 TTBK1Q5TCY1 1321 aaPredicted RBP25.66■■□□□ 1.7
COTL1-201ENST00000262428 TIAM1Q13009 1591 aa25.66■■□□□ 1.7
COTL1-201ENST00000262428 KANK4Q5T7N3 995 aaPredicted RBP25.64■■□□□ 1.7
COTL1-201ENST00000262428 CFAP43Q8NDM7 1665 aa25.62■■□□□ 1.69
COTL1-201ENST00000262428 PCGF6Q9BYE7 350 aa25.62■■□□□ 1.69
COTL1-201ENST00000262428 LRRIQ1Q96JM4 1722 aa25.62■■□□□ 1.69
COTL1-201ENST00000262428 HECW1Q76N89 1606 aa25.58■■□□□ 1.69
COTL1-201ENST00000262428 OSCARQ8IYS5 282 aa25.58■■□□□ 1.68
COTL1-201ENST00000262428 ERCC6L2Q5T890 1561 aa25.56■■□□□ 1.68
COTL1-201ENST00000262428 RAPGEF6Q8TEU7 1601 aa25.56■■□□□ 1.68
COTL1-201ENST00000262428 LRRC9Q6ZRR7 1453 aa25.54■■□□□ 1.68
COTL1-201ENST00000262428 PTPRGP23470 1445 aa25.51■■□□□ 1.67
COTL1-201ENST00000262428 CCDC18Q5T9S5 1454 aa25.51■■□□□ 1.67
COTL1-201ENST00000262428 PLB1Q6P1J6 1458 aa25.51■■□□□ 1.67
COTL1-201ENST00000262428 EPRSP07814 1512 aaKnown RBP25.5■■□□□ 1.67
COTL1-201ENST00000262428 NUP153P49790 1475 aaKnown RBP25.48■■□□□ 1.67
COTL1-201ENST00000262428 ABCA8O94911 1581 aa25.48■■□□□ 1.67
COTL1-201ENST00000262428 CDK13Q14004 1512 aaKnown RBP25.44■■□□□ 1.66
COTL1-201ENST00000262428 ARID3CA6NKF2 412 aa25.4■■□□□ 1.66
COTL1-201ENST00000262428 MTUS2Q5JR59 1369 aa25.39■■□□□ 1.65
COTL1-201ENST00000262428 MAGI3Q5TCQ9 1506 aa25.38■■□□□ 1.65
COTL1-201ENST00000262428 UACAQ9BZF9 1416 aa25.36■■□□□ 1.65
COTL1-201ENST00000262428 EHBP1L1Q8N3D4 1523 aa25.36■■□□□ 1.65
COTL1-201ENST00000262428 ATP10BO94823 1461 aa25.31■■□□□ 1.64
COTL1-201ENST00000262428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.3■■□□□ 1.64
COTL1-201ENST00000262428 HNRNPUL2Q1KMD3 747 aaKnown RBP25.3■■□□□ 1.64
COTL1-201ENST00000262428 SUPT6HQ7KZ85 1726 aaKnown RBP25.3■■□□□ 1.64
COTL1-201ENST00000262428 PHLDB1Q86UU1 1377 aa25.29■■□□□ 1.64
COTL1-201ENST00000262428 ABCC2Q92887 1545 aa25.29■■□□□ 1.64
COTL1-201ENST00000262428 RRBP1Q9P2E9 1410 aaKnown RBP25.28■■□□□ 1.64
COTL1-201ENST00000262428 CDK11AQ9UQ88 783 aaPredicted RBP25.28■■□□□ 1.64
COTL1-201ENST00000262428 NCOA2Q15596 1464 aa25.26■■□□□ 1.63
COTL1-201ENST00000262428 UHRF1BP1LA0JNW5 1464 aa25.26■■□□□ 1.63
COTL1-201ENST00000262428 ARHGEF11O15085 1522 aa25.24■■□□□ 1.63
COTL1-201ENST00000262428 TROQ12816 1431 aaPredicted RBP25.22■■□□□ 1.63
COTL1-201ENST00000262428 CCNB3Q8WWL7 1395 aa25.21■■□□□ 1.63
COTL1-201ENST00000262428 PLEKHD1A6NEE1 506 aa25.18■■□□□ 1.62
COTL1-201ENST00000262428 KDM5BQ9UGL1 1544 aa25.15■■□□□ 1.62
COTL1-201ENST00000262428 ADCY10Q96PN6 1610 aa25.15■■□□□ 1.62
COTL1-201ENST00000262428 MYOM3Q5VTT5 1437 aa25.15■■□□□ 1.62
COTL1-201ENST00000262428 FGD6Q6ZV73 1430 aa25.13■■□□□ 1.61
COTL1-201ENST00000262428 ZCCHC11Q5TAX3 1644 aaKnown RBP25.13■■□□□ 1.61
COTL1-201ENST00000262428 KIF14Q15058 1648 aa25.11■■□□□ 1.61
COTL1-201ENST00000262428 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.08■■□□□ 1.6
COTL1-201ENST00000262428 RIMBP3CA6NJZ7 1639 aa25.05■■□□□ 1.6
COTL1-201ENST00000262428 RIMBP3BA6NNM3 1639 aa25.05■■□□□ 1.6
COTL1-201ENST00000262428 RIMBP3Q9UFD9 1639 aa25.05■■□□□ 1.6
COTL1-201ENST00000262428 FAM50AQ14320 339 aaKnown RBP25.05■■□□□ 1.6
COTL1-201ENST00000262428 MIA2Q96PC5 1412 aa25.03■■□□□ 1.6
COTL1-201ENST00000262428 ABCC10Q5T3U5 1492 aa25.03■■□□□ 1.6
COTL1-201ENST00000262428 PTPN23Q9H3S7 1636 aa25.02■■□□□ 1.6
COTL1-201ENST00000262428 GPATCH8Q9UKJ3 1502 aaKnown RBP24.99■■□□□ 1.59
COTL1-201ENST00000262428 TCOF1Q13428 1488 aaKnown RBP24.99■■□□□ 1.59
COTL1-201ENST00000262428 ITSN2Q9NZM3 1697 aa24.98■■□□□ 1.59
COTL1-201ENST00000262428 ITGAEP38570 1179 aa24.97■■□□□ 1.59
COTL1-201ENST00000262428 CDC42BPAQ5VT25 1732 aa24.96■■□□□ 1.59
COTL1-201ENST00000262428 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.92■■□□□ 1.58
COTL1-201ENST00000262428 NPM1P06748 294 aaKnown RBP eCLIP24.91■■□□□ 1.58
COTL1-201ENST00000262428 CYB5RLQ6IPT4 315 aa24.91■■□□□ 1.58
COTL1-201ENST00000262428 KCNH8Q96L42 1107 aa24.91■■□□□ 1.58
COTL1-201ENST00000262428 CFDP1Q9UEE9 299 aaPredicted RBP24.91■■□□□ 1.58
COTL1-201ENST00000262428 WDR7Q9Y4E6 1490 aa24.9■■□□□ 1.58
COTL1-201ENST00000262428 TTC37Q6PGP7 1564 aa24.89■■□□□ 1.58
COTL1-201ENST00000262428 ASXL2Q76L83 1435 aa24.87■■□□□ 1.57
COTL1-201ENST00000262428 ZNF644Q9H582 1327 aaPredicted RBP24.87■■□□□ 1.57
COTL1-201ENST00000262428 CDC42BPBQ9Y5S2 1711 aa24.86■■□□□ 1.57
COTL1-201ENST00000262428 PREX2Q70Z35 1606 aa24.85■■□□□ 1.57
COTL1-201ENST00000262428 PTPRKQ15262 1439 aa24.85■■□□□ 1.57
COTL1-201ENST00000262428 CAMSAP2Q08AD1 1489 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms