RNA–Protein interactions for RNA: ENST00000262428.4

COTL1-201, Transcript of coactosin like F-actin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COTL1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-201ENST00000262428 NISCHQ9Y2I1 1504 aa38.05■■■■□ 3.68
COTL1-201ENST00000262428 CCDC180Q9P1Z9 1646 aa33.28■■■□□ 2.92
COTL1-201ENST00000262428 ZCCHC6Q5VYS8 1495 aaKnown RBP31.9■■■□□ 2.7
COTL1-201ENST00000262428 ABCC9O60706 1549 aa31.63■■■□□ 2.65
COTL1-201ENST00000262428 DCAF1Q9Y4B6 1507 aa31.47■■■□□ 2.63
COTL1-201ENST00000262428 DCAF8L2P0C7V8 631 aa31.45■■■□□ 2.62
COTL1-201ENST00000262428 MYO15BQ96JP2 1530 aa31.18■■■□□ 2.58
COTL1-201ENST00000262428 NACADO15069 1562 aa31.04■■■□□ 2.56
COTL1-201ENST00000262428 SHROOM4Q9ULL8 1493 aa30.83■■■□□ 2.53
COTL1-201ENST00000262428 RB1CC1Q8TDY2 1594 aa30.82■■■□□ 2.52
COTL1-201ENST00000262428 SCRIBQ14160 1630 aa30.54■■■□□ 2.48
COTL1-201ENST00000262428 UNC13AQ9UPW8 1703 aa30.23■■■□□ 2.43
COTL1-201ENST00000262428 BICRAQ9NZM4 1560 aa29.92■■■□□ 2.38
COTL1-201ENST00000262428 PABPN1Q86U42 306 aaKnown RBP eCLIP29.8■■■□□ 2.36
COTL1-201ENST00000262428 CECR2Q9BXF3 1484 aa29.58■■■□□ 2.33
COTL1-201ENST00000262428 SUPT5HO00267 1087 aaKnown RBP29.57■■■□□ 2.32
COTL1-201ENST00000262428 RSF1Q96T23 1441 aaPredicted RBP29.43■■■□□ 2.3
COTL1-201ENST00000262428 MROH2BQ7Z745 1585 aa29.39■■■□□ 2.29
COTL1-201ENST00000262428 BAZ1AQ9NRL2 1556 aaPredicted RBP29.38■■■□□ 2.29
COTL1-201ENST00000262428 SMARCA4P51532 1647 aa29.29■■■□□ 2.28
COTL1-201ENST00000262428 WIZO95785 1651 aa29.14■■■□□ 2.25
COTL1-201ENST00000262428 EIF4G1Q04637 1599 aaKnown RBP29.01■■■□□ 2.24
COTL1-201ENST00000262428 PEG3Q9GZU2 1588 aa28.95■■■□□ 2.23
COTL1-201ENST00000262428 ATAD2BQ9ULI0 1458 aa28.86■■■□□ 2.21
COTL1-201ENST00000262428 SMARCA2P51531 1590 aa28.83■■■□□ 2.21
COTL1-201ENST00000262428 TOP2AP11388 1531 aaKnown RBP28.81■■■□□ 2.2
COTL1-201ENST00000262428 BAZ1BQ9UIG0 1483 aaKnown RBP28.67■■■□□ 2.18
COTL1-201ENST00000262428 NCAPD3P42695 1498 aa28.66■■■□□ 2.18
COTL1-201ENST00000262428 CC2D2AQ9P2K1 1620 aa28.64■■■□□ 2.18
COTL1-201ENST00000262428 HMGXB3Q12766 1538 aa28.59■■■□□ 2.17
COTL1-201ENST00000262428 CCDC88BA6NC98 1476 aa28.53■■■□□ 2.16
COTL1-201ENST00000262428 CHIC1Q5VXU3 224 aa28.22■■■□□ 2.11
COTL1-201ENST00000262428 DNAJC5BQ9UF47 199 aa28.13■■■□□ 2.09
COTL1-201ENST00000262428 CFTRP13569 1480 aa27.95■■■□□ 2.07
COTL1-201ENST00000262428 CADPSQ9ULU8 1353 aa27.9■■■□□ 2.06
COTL1-201ENST00000262428 ABCC8Q09428 1581 aa27.84■■■□□ 2.05
COTL1-201ENST00000262428 TRIM41Q8WV44 630 aa27.83■■■□□ 2.05
COTL1-201ENST00000262428 PRDM2Q13029 1718 aa27.82■■■□□ 2.04
COTL1-201ENST00000262428 LAMC3Q9Y6N6 1575 aa27.72■■■□□ 2.03
COTL1-201ENST00000262428 NESP48681 1621 aa27.71■■■□□ 2.03
COTL1-201ENST00000262428 WRNQ14191 1432 aaPredicted RBP eCLIP27.69■■■□□ 2.02
COTL1-201ENST00000262428 SYNJ1O43426 1573 aa27.59■■■□□ 2.01
COTL1-201ENST00000262428 FANCD2Q9BXW9 1451 aa27.58■■■□□ 2.01
COTL1-201ENST00000262428 TOP2BQ02880 1626 aa27.51■■□□□ 1.99
COTL1-201ENST00000262428 BIVM-ERCC5R4GMW8 1640 aa27.5■■□□□ 1.99
COTL1-201ENST00000262428 PDS5BQ9NTI5 1447 aa27.49■■□□□ 1.99
COTL1-201ENST00000262428 CUX1P39880 1505 aa27.49■■□□□ 1.99
COTL1-201ENST00000262428 CEP164Q9UPV0 1460 aa27.42■■□□□ 1.98
COTL1-201ENST00000262428 KIF21AQ7Z4S6 1674 aa27.39■■□□□ 1.98
COTL1-201ENST00000262428 DNMBPQ6XZF7 1577 aa27.31■■□□□ 1.96
COTL1-201ENST00000262428 FAM9AQ8IZU1 332 aaPredicted RBP27.3■■□□□ 1.96
COTL1-201ENST00000262428 SOGA1O94964 1423 aa27.29■■□□□ 1.96
COTL1-201ENST00000262428 TOPBP1Q92547 1522 aa27.27■■□□□ 1.96
COTL1-201ENST00000262428 URB2Q14146 1524 aaKnown RBP27.26■■□□□ 1.95
COTL1-201ENST00000262428 RUSC2Q8N2Y8 1516 aa27.21■■□□□ 1.95
COTL1-201ENST00000262428 FGD5Q6ZNL6 1462 aa27.21■■□□□ 1.95
COTL1-201ENST00000262428 EEA1Q15075 1411 aa27.19■■□□□ 1.94
COTL1-201ENST00000262428 MRC2Q9UBG0 1479 aa27.15■■□□□ 1.94
COTL1-201ENST00000262428 LOC105371045A0A1W2PR82 267 aa27.13■■□□□ 1.93
COTL1-201ENST00000262428 ERCC6Q03468 1493 aa27.12■■□□□ 1.93
COTL1-201ENST00000262428 POLA1P09884 1462 aaPredicted RBP27.11■■□□□ 1.93
COTL1-201ENST00000262428 CSRNP3Q8WYN3 585 aa27.07■■□□□ 1.92
COTL1-201ENST00000262428 WDR62O43379 1518 aa27.02■■□□□ 1.92
COTL1-201ENST00000262428 RAD54L2Q9Y4B4 1467 aa27.02■■□□□ 1.92
COTL1-201ENST00000262428 KIF27Q86VH2 1401 aa27.01■■□□□ 1.91
COTL1-201ENST00000262428 THOC2Q8NI27 1593 aaKnown RBP26.99■■□□□ 1.91
COTL1-201ENST00000262428 CUX2O14529 1486 aa26.98■■□□□ 1.91
COTL1-201ENST00000262428 ABCA10Q8WWZ4 1543 aa26.97■■□□□ 1.91
COTL1-201ENST00000262428 WDR97A6NE52 1622 aa26.91■■□□□ 1.9
COTL1-201ENST00000262428 TARBP1Q13395 1621 aaKnown RBP26.9■■□□□ 1.9
COTL1-201ENST00000262428 EHMT2Q96KQ7 1210 aa26.9■■□□□ 1.9
COTL1-201ENST00000262428 KIF21BO75037 1637 aa26.85■■□□□ 1.89
COTL1-201ENST00000262428 IGF1RP08069 1367 aa26.81■■□□□ 1.88
COTL1-201ENST00000262428 GOLGA3Q08378 1498 aa26.79■■□□□ 1.88
COTL1-201ENST00000262428 IFT140Q96RY7 1462 aa26.79■■□□□ 1.88
COTL1-201ENST00000262428 PRXQ9BXM0 1461 aa26.79■■□□□ 1.88
COTL1-201ENST00000262428 ABCA5Q8WWZ7 1642 aa26.78■■□□□ 1.88
COTL1-201ENST00000262428 TDRD9Q8NDG6 1382 aaKnown RBP26.77■■□□□ 1.88
COTL1-201ENST00000262428 RAPGEF2Q9Y4G8 1499 aa26.73■■□□□ 1.87
COTL1-201ENST00000262428 GAPVD1Q14C86 1478 aa26.72■■□□□ 1.87
COTL1-201ENST00000262428 ERICH3Q5RHP9 1530 aa26.71■■□□□ 1.87
COTL1-201ENST00000262428 TNIKQ9UKE5 1360 aa26.68■■□□□ 1.86
COTL1-201ENST00000262428 UBTFP17480 764 aaKnown RBP26.67■■□□□ 1.86
COTL1-201ENST00000262428 CARMIL1Q5VZK9 1371 aa26.66■■□□□ 1.86
COTL1-201ENST00000262428 ZNF608Q9ULD9 1512 aaPredicted RBP26.65■■□□□ 1.86
COTL1-201ENST00000262428 AQRO60306 1485 aaKnown RBP eCLIP26.65■■□□□ 1.863e-8■■■■■ 35
COTL1-201ENST00000262428 CUL7Q14999 1698 aa26.62■■□□□ 1.85
COTL1-201ENST00000262428 PBRM1Q86U86 1689 aa26.6■■□□□ 1.85
COTL1-201ENST00000262428 EIF4G3O43432 1585 aaKnown RBP26.55■■□□□ 1.84
COTL1-201ENST00000262428 GRIN2BQ13224 1484 aa26.55■■□□□ 1.84
COTL1-201ENST00000262428 CEP162Q5TB80 1403 aa26.5■■□□□ 1.83
COTL1-201ENST00000262428 ADAMTS12P58397 1594 aa26.43■■□□□ 1.82
COTL1-201ENST00000262428 FHAD1B1AJZ9 1412 aa26.43■■□□□ 1.82
COTL1-201ENST00000262428 SNAPC4Q5SXM2 1469 aa26.38■■□□□ 1.81
COTL1-201ENST00000262428 CLIP1P30622 1438 aa26.35■■□□□ 1.81
COTL1-201ENST00000262428 MAGI1Q96QZ7 1491 aaPredicted RBP26.35■■□□□ 1.81
COTL1-201ENST00000262428 CTTNBP2Q8WZ74 1663 aa26.3■■□□□ 1.8
COTL1-201ENST00000262428 RANGAP1P46060 587 aaPredicted RBP26.28■■□□□ 1.8
COTL1-201ENST00000262428 SYNJ2O15056 1496 aa26.25■■□□□ 1.79
COTL1-201ENST00000262428 GRIN2AQ12879 1464 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms