RNA–Protein interactions for RNA: ENST00000262426.5

FOXF1-201, Transcript of forkhead box F1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXF1, Length 3,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1-201ENST00000262426 TARBP1Q13395 1621 aaKnown RBP21.94■■□□□ 1.1
FOXF1-201ENST00000262426 WDR97A6NE52 1622 aa21.93■■□□□ 1.1
FOXF1-201ENST00000262426 NEUROD1Q13562 356 aa21.93■■□□□ 1.1
FOXF1-201ENST00000262426 CCER1Q8TC90 406 aaPredicted RBP21.93■■□□□ 1.1
FOXF1-201ENST00000262426 GTF3C3Q9Y5Q9 886 aa21.92■■□□□ 1.1
FOXF1-201ENST00000262426 FHOD3Q2V2M9 1422 aa21.92■■□□□ 1.1
FOXF1-201ENST00000262426 ABCA5Q8WWZ7 1642 aa21.91■■□□□ 1.1
FOXF1-201ENST00000262426 FBLN2P98095 1184 aa21.9■■□□□ 1.1
FOXF1-201ENST00000262426 ITGAEP38570 1179 aa21.85■■□□□ 1.09
FOXF1-201ENST00000262426 ARID3CA6NKF2 412 aa21.83■■□□□ 1.08
FOXF1-201ENST00000262426 CUL7Q14999 1698 aa21.83■■□□□ 1.08
FOXF1-201ENST00000262426 WDR62O43379 1518 aa21.81■■□□□ 1.08
FOXF1-201ENST00000262426 ACIN1Q9UKV3 1341 aaKnown RBP21.78■■□□□ 1.08
FOXF1-201ENST00000262426 IFT140Q96RY7 1462 aa21.77■■□□□ 1.08
FOXF1-201ENST00000262426 GRIN2BQ13224 1484 aa21.75■■□□□ 1.07
FOXF1-201ENST00000262426 PBRM1Q86U86 1689 aa21.73■■□□□ 1.07
FOXF1-201ENST00000262426 FHAD1B1AJZ9 1412 aa21.73■■□□□ 1.07
FOXF1-201ENST00000262426 THOC2Q8NI27 1593 aaKnown RBP21.72■■□□□ 1.07
FOXF1-201ENST00000262426 CHMP7Q8WUX9 453 aaPredicted RBP21.72■■□□□ 1.07
FOXF1-201ENST00000262426 SNAPC4Q5SXM2 1469 aa21.71■■□□□ 1.07
FOXF1-201ENST00000262426 CTTNBP2Q8WZ74 1663 aa21.7■■□□□ 1.06
FOXF1-201ENST00000262426 PCF11O94913 1555 aaKnown RBP21.67■■□□□ 1.06
FOXF1-201ENST00000262426 ZEB1P37275 1124 aaPredicted RBP21.67■■□□□ 1.06
FOXF1-201ENST00000262426 EIF4G3O43432 1585 aaKnown RBP21.66■■□□□ 1.06
FOXF1-201ENST00000262426 ADAMTS12P58397 1594 aa21.64■■□□□ 1.05
FOXF1-201ENST00000262426 FAM50AQ14320 339 aaKnown RBP21.62■■□□□ 1.05
FOXF1-201ENST00000262426 YTHDC1Q96MU7 727 aaKnown RBP21.62■■□□□ 1.05
FOXF1-201ENST00000262426 TIAM1Q13009 1591 aa21.59■■□□□ 1.05
FOXF1-201ENST00000262426 PHLDB1Q86UU1 1377 aa21.57■■□□□ 1.04
FOXF1-201ENST00000262426 LRRC9Q6ZRR7 1453 aa21.57■■□□□ 1.04
FOXF1-201ENST00000262426 EFCAB5A4FU69 1503 aa21.56■■□□□ 1.04
FOXF1-201ENST00000262426 FMN1Q68DA7 1419 aa21.55■■□□□ 1.04
FOXF1-201ENST00000262426 CCNB3Q8WWL7 1395 aa21.54■■□□□ 1.04
FOXF1-201ENST00000262426 CASKIN1Q8WXD9 1431 aa21.54■■□□□ 1.04
FOXF1-201ENST00000262426 GRIN2AQ12879 1464 aa21.53■■□□□ 1.04
FOXF1-201ENST00000262426 IQGAP2Q13576 1575 aa21.53■■□□□ 1.04
FOXF1-201ENST00000262426 MTUS2Q5JR59 1369 aa21.5■■□□□ 1.03
FOXF1-201ENST00000262426 SAMD9Q5K651 1589 aa21.49■■□□□ 1.03
FOXF1-201ENST00000262426 FYCO1Q9BQS8 1478 aa21.49■■□□□ 1.03
FOXF1-201ENST00000262426 RRBP1Q9P2E9 1410 aaKnown RBP21.46■■□□□ 1.03
FOXF1-201ENST00000262426 CENPBP07199 599 aaPredicted RBP21.45■■□□□ 1.02
FOXF1-201ENST00000262426 JPH4Q96JJ6 628 aa21.45■■□□□ 1.02
FOXF1-201ENST00000262426 SYNJ2O15056 1496 aa21.44■■□□□ 1.02
FOXF1-201ENST00000262426 KIAA0586Q9BVV6 1533 aa21.43■■□□□ 1.02
FOXF1-201ENST00000262426 MAGI1Q96QZ7 1491 aaPredicted RBP21.43■■□□□ 1.02
FOXF1-201ENST00000262426 CEP170Q5SW79 1584 aa21.4■■□□□ 1.02
FOXF1-201ENST00000262426 LRRIQ1Q96JM4 1722 aa21.4■■□□□ 1.02
FOXF1-201ENST00000262426 MAP3K1Q13233 1512 aa21.39■■□□□ 1.01
FOXF1-201ENST00000262426 CDK13Q14004 1512 aaKnown RBP21.38■■□□□ 1.01
FOXF1-201ENST00000262426 DISP1Q96F81 1524 aa21.38■■□□□ 1.01
FOXF1-201ENST00000262426 CFAP43Q8NDM7 1665 aa21.37■■□□□ 1.01
FOXF1-201ENST00000262426 UGGT2Q9NYU1 1516 aa21.33■■□□□ 1.01
FOXF1-201ENST00000262426 MAGI3Q5TCQ9 1506 aa21.33■■□□□ 1
FOXF1-201ENST00000262426 DIEXFQ68CQ4 756 aaKnown RBP21.31■■□□□ 1
FOXF1-201ENST00000262426 PLB1Q6P1J6 1458 aa21.3■■□□□ 1
FOXF1-201ENST00000262426 CHIC2Q9UKJ5 165 aa21.29■■□□□ 1
FOXF1-201ENST00000262426 EPRSP07814 1512 aaKnown RBP21.29■■□□□ 1
FOXF1-201ENST00000262426 KIAA0556O60303 1618 aa21.29■■□□□ 1
FOXF1-201ENST00000262426 NCOA2Q15596 1464 aa21.29■■□□□ 1
FOXF1-201ENST00000262426 RAB3GAP2Q9H2M9 1393 aa21.28■■□□□ 1
FOXF1-201ENST00000262426 DHX57Q6P158 1386 aaKnown RBP21.27■■□□□ 1
FOXF1-201ENST00000262426 NUP160Q12769 1436 aa21.26■□□□□ 0.99
FOXF1-201ENST00000262426 BCL11AQ9H165 835 aa21.25■□□□□ 0.99
FOXF1-201ENST00000262426 FGD6Q6ZV73 1430 aa21.25■□□□□ 0.99
FOXF1-201ENST00000262426 NUP153P49790 1475 aaKnown RBP21.21■□□□□ 0.99
FOXF1-201ENST00000262426 HECW1Q76N89 1606 aa21.21■□□□□ 0.99
FOXF1-201ENST00000262426 CARMIL2Q6F5E8 1435 aa21.2■□□□□ 0.98
FOXF1-201ENST00000262426 PRG4Q92954 1404 aaPredicted RBP21.2■□□□□ 0.98
FOXF1-201ENST00000262426 ZNF644Q9H582 1327 aaPredicted RBP21.2■□□□□ 0.98
FOXF1-201ENST00000262426 RRP7BPQ9NSQ0 103 aa21.19■□□□□ 0.98
FOXF1-201ENST00000262426 PTPRKQ15262 1439 aa21.18■□□□□ 0.98
FOXF1-201ENST00000262426 MYOM3Q5VTT5 1437 aa21.17■□□□□ 0.98
FOXF1-201ENST00000262426 ZNF777Q9ULD5 760 aaPredicted RBP21.17■□□□□ 0.98
FOXF1-201ENST00000262426 CCDC18Q5T9S5 1454 aa21.17■□□□□ 0.98
FOXF1-201ENST00000262426 SETD5Q9C0A6 1442 aa21.17■□□□□ 0.98
FOXF1-201ENST00000262426 CHD1O14646 1710 aa21.16■□□□□ 0.98
FOXF1-201ENST00000262426 EHBP1L1Q8N3D4 1523 aa21.14■□□□□ 0.98
FOXF1-201ENST00000262426 SUPT6HQ7KZ85 1726 aaKnown RBP21.13■□□□□ 0.97
FOXF1-201ENST00000262426 SIN3AQ96ST3 1273 aa21.13■□□□□ 0.97
FOXF1-201ENST00000262426 RAPGEF6Q8TEU7 1601 aa21.13■□□□□ 0.97
FOXF1-201ENST00000262426 CDK11AQ9UQ88 783 aaPredicted RBP21.12■□□□□ 0.97
FOXF1-201ENST00000262426 PTPRGP23470 1445 aa21.09■□□□□ 0.97
FOXF1-201ENST00000262426 ERCC6L2Q5T890 1561 aa21.07■□□□□ 0.96
FOXF1-201ENST00000262426 PLEKHD1A6NEE1 506 aa21.05■□□□□ 0.96
FOXF1-201ENST00000262426 PTPN23Q9H3S7 1636 aa21.04■□□□□ 0.96
FOXF1-201ENST00000262426 CFDP1Q9UEE9 299 aaPredicted RBP21.03■□□□□ 0.96
FOXF1-201ENST00000262426 ARHGEF11O15085 1522 aa21.01■□□□□ 0.95
FOXF1-201ENST00000262426 KCNH8Q96L42 1107 aa21■□□□□ 0.95
FOXF1-201ENST00000262426 ATP10BO94823 1461 aa21■□□□□ 0.95
FOXF1-201ENST00000262426 TRIM52Q96A61 297 aa21■□□□□ 0.95
FOXF1-201ENST00000262426 ZNF316A6NFI3 1004 aaPredicted RBP21■□□□□ 0.95
FOXF1-201ENST00000262426 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.98■□□□□ 0.95
FOXF1-201ENST00000262426 TROQ12816 1431 aaPredicted RBP20.97■□□□□ 0.95
FOXF1-201ENST00000262426 KIF14Q15058 1648 aa20.96■□□□□ 0.95
FOXF1-201ENST00000262426 MAPKBP1O60336 1514 aa20.95■□□□□ 0.94
FOXF1-201ENST00000262426 NAIPQ13075 1403 aa20.95■□□□□ 0.94
FOXF1-201ENST00000262426 FOXD1Q16676 465 aa20.94■□□□□ 0.94
FOXF1-201ENST00000262426 CLSPNQ9HAW4 1339 aa20.92■□□□□ 0.94
FOXF1-201ENST00000262426 ABCA8O94911 1581 aa20.92■□□□□ 0.94
FOXF1-201ENST00000262426 HFM1A2PYH4 1435 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms