RNA–Protein interactions for RNA: ENST00000262426.5

FOXF1-201, Transcript of forkhead box F1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXF1, Length 3,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1-201ENST00000262426 NISCHQ9Y2I1 1504 aa31.41■■■□□ 2.62
FOXF1-201ENST00000262426 CCDC180Q9P1Z9 1646 aa26.87■■□□□ 1.89
FOXF1-201ENST00000262426 DCAF8L2P0C7V8 631 aa26.75■■□□□ 1.87
FOXF1-201ENST00000262426 SHROOM4Q9ULL8 1493 aa26.62■■□□□ 1.85
FOXF1-201ENST00000262426 ZCCHC6Q5VYS8 1495 aaKnown RBP26.38■■□□□ 1.81
FOXF1-201ENST00000262426 ABCC9O60706 1549 aa25.94■■□□□ 1.74
FOXF1-201ENST00000262426 SUPT5HO00267 1087 aaKnown RBP25.76■■□□□ 1.71
FOXF1-201ENST00000262426 DCAF1Q9Y4B6 1507 aa25.59■■□□□ 1.69
FOXF1-201ENST00000262426 SCRIBQ14160 1630 aa25.35■■□□□ 1.65
FOXF1-201ENST00000262426 NACADO15069 1562 aa25.11■■□□□ 1.61
FOXF1-201ENST00000262426 MYO15BQ96JP2 1530 aa25.09■■□□□ 1.61
FOXF1-201ENST00000262426 RB1CC1Q8TDY2 1594 aa24.91■■□□□ 1.58
FOXF1-201ENST00000262426 PABPN1Q86U42 306 aaKnown RBP eCLIP24.78■■□□□ 1.56
FOXF1-201ENST00000262426 CECR2Q9BXF3 1484 aa24.71■■□□□ 1.55
FOXF1-201ENST00000262426 RSF1Q96T23 1441 aaPredicted RBP24.64■■□□□ 1.54
FOXF1-201ENST00000262426 UNC13AQ9UPW8 1703 aa24.51■■□□□ 1.51
FOXF1-201ENST00000262426 CHIC1Q5VXU3 224 aa24.5■■□□□ 1.51
FOXF1-201ENST00000262426 MROH2BQ7Z745 1585 aa24.47■■□□□ 1.51
FOXF1-201ENST00000262426 WIZO95785 1651 aa24.29■■□□□ 1.48
FOXF1-201ENST00000262426 BICRAQ9NZM4 1560 aa24.29■■□□□ 1.48
FOXF1-201ENST00000262426 BAZ1AQ9NRL2 1556 aaPredicted RBP24.15■■□□□ 1.46
FOXF1-201ENST00000262426 SMARCA4P51532 1647 aa24.06■■□□□ 1.44
FOXF1-201ENST00000262426 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
FOXF1-201ENST00000262426 LOC105371045A0A1W2PR82 267 aa23.92■■□□□ 1.42
FOXF1-201ENST00000262426 FAM9AQ8IZU1 332 aaPredicted RBP23.89■■□□□ 1.42
FOXF1-201ENST00000262426 EHMT2Q96KQ7 1210 aa23.87■■□□□ 1.41
FOXF1-201ENST00000262426 CCDC88BA6NC98 1476 aa23.79■■□□□ 1.4
FOXF1-201ENST00000262426 TOP2AP11388 1531 aaKnown RBP23.78■■□□□ 1.4
FOXF1-201ENST00000262426 ATAD2BQ9ULI0 1458 aa23.69■■□□□ 1.38
FOXF1-201ENST00000262426 SMARCA2P51531 1590 aa23.67■■□□□ 1.38
FOXF1-201ENST00000262426 BAZ1BQ9UIG0 1483 aaKnown RBP23.6■■□□□ 1.37
FOXF1-201ENST00000262426 PPARGC1BQ86YN6 1023 aaKnown RBP23.56■■□□□ 1.36
FOXF1-201ENST00000262426 EIF4G1Q04637 1599 aaKnown RBP23.56■■□□□ 1.36
FOXF1-201ENST00000262426 ABCC8Q09428 1581 aa23.56■■□□□ 1.36
FOXF1-201ENST00000262426 PEG3Q9GZU2 1588 aa23.51■■□□□ 1.35
FOXF1-201ENST00000262426 HRCP23327 699 aa23.41■■□□□ 1.34
FOXF1-201ENST00000262426 NCAPD3P42695 1498 aa23.3■■□□□ 1.32
FOXF1-201ENST00000262426 PCGF6Q9BYE7 350 aa23.22■■□□□ 1.31
FOXF1-201ENST00000262426 SOGA1O94964 1423 aa23.21■■□□□ 1.31
FOXF1-201ENST00000262426 CC2D2AQ9P2K1 1620 aa23.2■■□□□ 1.31
FOXF1-201ENST00000262426 WRNQ14191 1432 aaPredicted RBP eCLIP23.18■■□□□ 1.3
FOXF1-201ENST00000262426 DNAJC5BQ9UF47 199 aa23.17■■□□□ 1.3
FOXF1-201ENST00000262426 RUSC2Q8N2Y8 1516 aa23.16■■□□□ 1.3
FOXF1-201ENST00000262426 HMGXB3Q12766 1538 aa23.15■■□□□ 1.3
FOXF1-201ENST00000262426 SYNJ1O43426 1573 aa23.07■■□□□ 1.28
FOXF1-201ENST00000262426 CSRNP3Q8WYN3 585 aa22.99■■□□□ 1.27
FOXF1-201ENST00000262426 UBTFP17480 764 aaKnown RBP22.96■■□□□ 1.27
FOXF1-201ENST00000262426 RANGAP1P46060 587 aaPredicted RBP22.92■■□□□ 1.26
FOXF1-201ENST00000262426 CFTRP13569 1480 aa22.92■■□□□ 1.26
FOXF1-201ENST00000262426 PELP1Q8IZL8 1130 aaKnown RBP22.92■■□□□ 1.26
FOXF1-201ENST00000262426 CADPSQ9ULU8 1353 aa22.89■■□□□ 1.25
FOXF1-201ENST00000262426 NESP48681 1621 aa22.86■■□□□ 1.25
FOXF1-201ENST00000262426 TTBK1Q5TCY1 1321 aaPredicted RBP22.84■■□□□ 1.25
FOXF1-201ENST00000262426 CUX1P39880 1505 aa22.8■■□□□ 1.24
FOXF1-201ENST00000262426 TOP2BQ02880 1626 aa22.75■■□□□ 1.23
FOXF1-201ENST00000262426 EEA1Q15075 1411 aa22.69■■□□□ 1.22
FOXF1-201ENST00000262426 FANCD2Q9BXW9 1451 aa22.67■■□□□ 1.22
FOXF1-201ENST00000262426 SCAF1Q9H7N4 1312 aaKnown RBP22.66■■□□□ 1.22
FOXF1-201ENST00000262426 CEP162Q5TB80 1403 aa22.66■■□□□ 1.22
FOXF1-201ENST00000262426 TRIM26Q12899 539 aaPredicted RBP22.65■■□□□ 1.22
FOXF1-201ENST00000262426 BIVM-ERCC5R4GMW8 1640 aa22.63■■□□□ 1.21
FOXF1-201ENST00000262426 RAPGEF2Q9Y4G8 1499 aa22.63■■□□□ 1.21
FOXF1-201ENST00000262426 GOLGA3Q08378 1498 aa22.61■■□□□ 1.21
FOXF1-201ENST00000262426 TNIKQ9UKE5 1360 aa22.61■■□□□ 1.21
FOXF1-201ENST00000262426 CEP164Q9UPV0 1460 aa22.56■■□□□ 1.2
FOXF1-201ENST00000262426 FGD5Q6ZNL6 1462 aa22.54■■□□□ 1.2
FOXF1-201ENST00000262426 CUX2O14529 1486 aa22.53■■□□□ 1.2
FOXF1-201ENST00000262426 KIF27Q86VH2 1401 aa22.51■■□□□ 1.19
FOXF1-201ENST00000262426 RAD54L2Q9Y4B4 1467 aa22.5■■□□□ 1.19
FOXF1-201ENST00000262426 PRDM2Q13029 1718 aa22.5■■□□□ 1.19
FOXF1-201ENST00000262426 KIF21BO75037 1637 aa22.42■■□□□ 1.18
FOXF1-201ENST00000262426 CLIP1P30622 1438 aa22.41■■□□□ 1.18
FOXF1-201ENST00000262426 TOPBP1Q92547 1522 aa22.41■■□□□ 1.18
FOXF1-201ENST00000262426 IGF1RP08069 1367 aa22.39■■□□□ 1.17
FOXF1-201ENST00000262426 LAMC3Q9Y6N6 1575 aa22.38■■□□□ 1.17
FOXF1-201ENST00000262426 PRXQ9BXM0 1461 aa22.38■■□□□ 1.17
FOXF1-201ENST00000262426 URB2Q14146 1524 aaKnown RBP22.38■■□□□ 1.17
FOXF1-201ENST00000262426 POLA1P09884 1462 aaPredicted RBP22.37■■□□□ 1.17
FOXF1-201ENST00000262426 PDS5BQ9NTI5 1447 aa22.37■■□□□ 1.17
FOXF1-201ENST00000262426 TDRD9Q8NDG6 1382 aaKnown RBP22.34■■□□□ 1.17
FOXF1-201ENST00000262426 DNMBPQ6XZF7 1577 aa22.32■■□□□ 1.16
FOXF1-201ENST00000262426 KIF21AQ7Z4S6 1674 aa22.31■■□□□ 1.16
FOXF1-201ENST00000262426 CARMIL1Q5VZK9 1371 aa22.29■■□□□ 1.16
FOXF1-201ENST00000262426 P3H3Q8IVL6 736 aa22.27■■□□□ 1.16
FOXF1-201ENST00000262426 APLP2Q06481 763 aa22.2■■□□□ 1.14
FOXF1-201ENST00000262426 ERICH3Q5RHP9 1530 aa22.19■■□□□ 1.14
FOXF1-201ENST00000262426 ABCA10Q8WWZ4 1543 aa22.16■■□□□ 1.14
FOXF1-201ENST00000262426 VPS8Q8N3P4 1428 aa22.14■■□□□ 1.14
FOXF1-201ENST00000262426 ATP1B4Q9UN42 357 aaPredicted RBP22.12■■□□□ 1.13
FOXF1-201ENST00000262426 ARAP1Q96P48 1450 aa22.12■■□□□ 1.13
FOXF1-201ENST00000262426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.11■■□□□ 1.13
FOXF1-201ENST00000262426 AQRO60306 1485 aaKnown RBP eCLIP22.1■■□□□ 1.13
FOXF1-201ENST00000262426 ERCC6Q03468 1493 aa22.1■■□□□ 1.13
FOXF1-201ENST00000262426 KANK4Q5T7N3 995 aaPredicted RBP22.07■■□□□ 1.12
FOXF1-201ENST00000262426 GAPVD1Q14C86 1478 aa22.06■■□□□ 1.12
FOXF1-201ENST00000262426 ARHGAP35Q9NRY4 1499 aa22.05■■□□□ 1.12
FOXF1-201ENST00000262426 HNRNPUL2Q1KMD3 747 aaKnown RBP22.05■■□□□ 1.12
FOXF1-201ENST00000262426 MRC2Q9UBG0 1479 aa22.04■■□□□ 1.12
FOXF1-201ENST00000262426 ZNF608Q9ULD9 1512 aaPredicted RBP21.99■■□□□ 1.11
FOXF1-201ENST00000262426 MYT1Q01538 1121 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms