RNA–Protein interactions for RNA: ENST00000260382.9

LRRC49-201, Transcript of leucine rich repeat containing 49, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRC49, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-201ENST00000260382 TOP2BQ02880 1626 aa8.97□□□□□ -0.97
LRRC49-201ENST00000260382 NCAPD3P42695 1498 aa8.97□□□□□ -0.97
LRRC49-201ENST00000260382 KIF21BO75037 1637 aa8.96□□□□□ -0.97
LRRC49-201ENST00000260382 HMGXB3Q12766 1538 aa8.96□□□□□ -0.97
LRRC49-201ENST00000260382 CUX1P39880 1505 aa8.94□□□□□ -0.98
LRRC49-201ENST00000260382 DSG3P32926 999 aa8.93□□□□□ -0.98
LRRC49-201ENST00000260382 RTN4Q9NQC3 1192 aaKnown RBP8.93□□□□□ -0.98
LRRC49-201ENST00000260382 SPDYE4A6NLX3 237 aa8.92□□□□□ -0.98
LRRC49-201ENST00000260382 BIVM-ERCC5R4GMW8 1640 aa8.92□□□□□ -0.98
LRRC49-201ENST00000260382 VPS8Q8N3P4 1428 aa8.9□□□□□ -0.98
LRRC49-201ENST00000260382 CFTRP13569 1480 aa8.9□□□□□ -0.98
LRRC49-201ENST00000260382 KIF27Q86VH2 1401 aa8.88□□□□□ -0.99
LRRC49-201ENST00000260382 CC2D2AQ9P2K1 1620 aa8.88□□□□□ -0.99
LRRC49-201ENST00000260382 FBLN2P98095 1184 aa8.87□□□□□ -0.99
LRRC49-201ENST00000260382 CUX2O14529 1486 aa8.85□□□□□ -0.99
LRRC49-201ENST00000260382 PRXQ9BXM0 1461 aa8.85□□□□□ -0.99
LRRC49-201ENST00000260382 CACNB1Q02641 598 aaPredicted RBP8.84□□□□□ -0.99
LRRC49-201ENST00000260382 CADPSQ9ULU8 1353 aa8.84□□□□□ -0.99
LRRC49-201ENST00000260382 ARAP1Q96P48 1450 aa8.83□□□□□ -1
LRRC49-201ENST00000260382 KANK4Q5T7N3 995 aaPredicted RBP8.83□□□□□ -1
LRRC49-201ENST00000260382 OSCARQ8IYS5 282 aa8.83□□□□□ -1
LRRC49-201ENST00000260382 ERICH3Q5RHP9 1530 aa8.82□□□□□ -1
LRRC49-201ENST00000260382 FGD5Q6ZNL6 1462 aa8.82□□□□□ -1
LRRC49-201ENST00000260382 ITGAEP38570 1179 aa8.81□□□□□ -1
LRRC49-201ENST00000260382 NESP48681 1621 aa8.81□□□□□ -1
LRRC49-201ENST00000260382 P3H3Q8IVL6 736 aa8.8□□□□□ -1
LRRC49-201ENST00000260382 PRDM2Q13029 1718 aa8.8□□□□□ -1
LRRC49-201ENST00000260382 DIEXFQ68CQ4 756 aaKnown RBP8.79□□□□□ -1
LRRC49-201ENST00000260382 ATP1B4Q9UN42 357 aaPredicted RBP8.79□□□□□ -1
LRRC49-201ENST00000260382 FANCD2Q9BXW9 1451 aa8.79□□□□□ -1
LRRC49-201ENST00000260382 IGF1RP08069 1367 aa8.77□□□□□ -1.01
LRRC49-201ENST00000260382 ARHGAP35Q9NRY4 1499 aa8.77□□□□□ -1.01
LRRC49-201ENST00000260382 RAD54L2Q9Y4B4 1467 aa8.77□□□□□ -1.01
LRRC49-201ENST00000260382 CARMIL1Q5VZK9 1371 aa8.76□□□□□ -1.01
LRRC49-201ENST00000260382 PROM2Q8N271 834 aa8.75□□□□□ -1.01
LRRC49-201ENST00000260382 ZBTB12Q9Y330 459 aaPredicted RBP8.72□□□□□ -1.01
LRRC49-201ENST00000260382 ZNF316A6NFI3 1004 aaPredicted RBP8.71□□□□□ -1.01
LRRC49-201ENST00000260382 AMER1Q5JTC6 1135 aaPredicted RBP8.71□□□□□ -1.01
LRRC49-201ENST00000260382 POLA1P09884 1462 aaPredicted RBP8.71□□□□□ -1.02
LRRC49-201ENST00000260382 TOPBP1Q92547 1522 aa8.71□□□□□ -1.02
LRRC49-201ENST00000260382 YTHDC1Q96MU7 727 aaKnown RBP8.71□□□□□ -1.02
LRRC49-201ENST00000260382 ZNF692Q9BU19 519 aaPredicted RBP8.69□□□□□ -1.02
LRRC49-201ENST00000260382 DNMBPQ6XZF7 1577 aa8.69□□□□□ -1.02
LRRC49-201ENST00000260382 TDRD9Q8NDG6 1382 aaKnown RBP8.69□□□□□ -1.02
LRRC49-201ENST00000260382 FHOD3Q2V2M9 1422 aa8.69□□□□□ -1.02
LRRC49-201ENST00000260382 FAM50AQ14320 339 aaKnown RBP8.68□□□□□ -1.02
LRRC49-201ENST00000260382 CCNB3Q8WWL7 1395 aa8.67□□□□□ -1.02
LRRC49-201ENST00000260382 NEUROD1Q13562 356 aa8.67□□□□□ -1.02
LRRC49-201ENST00000260382 URB2Q14146 1524 aaKnown RBP8.66□□□□□ -1.02
LRRC49-201ENST00000260382 DHX57Q6P158 1386 aaKnown RBP8.66□□□□□ -1.02
LRRC49-201ENST00000260382 VASPP50552 380 aaPredicted RBP8.66□□□□□ -1.02
LRRC49-201ENST00000260382 PCF11O94913 1555 aaKnown RBP8.65□□□□□ -1.02
LRRC49-201ENST00000260382 TIAM1Q13009 1591 aa8.65□□□□□ -1.03
LRRC49-201ENST00000260382 ABCA10Q8WWZ4 1543 aa8.65□□□□□ -1.03
LRRC49-201ENST00000260382 RRBP1Q9P2E9 1410 aaKnown RBP8.65□□□□□ -1.03
LRRC49-201ENST00000260382 FBXO3Q9UK99 471 aa8.64□□□□□ -1.03
LRRC49-201ENST00000260382 IFNLR1Q8IU57 520 aaPredicted RBP8.63□□□□□ -1.03
LRRC49-201ENST00000260382 PHLDB1Q86UU1 1377 aa8.63□□□□□ -1.03
LRRC49-201ENST00000260382 MIER1Q8N108 512 aa8.62□□□□□ -1.03
LRRC49-201ENST00000260382 ACIN1Q9UKV3 1341 aaKnown RBP8.62□□□□□ -1.03
LRRC49-201ENST00000260382 LRRC9Q6ZRR7 1453 aa8.62□□□□□ -1.03
LRRC49-201ENST00000260382 KIF21AQ7Z4S6 1674 aa8.62□□□□□ -1.03
LRRC49-201ENST00000260382 SSUH2Q9Y2M2 353 aa8.61□□□□□ -1.03
LRRC49-201ENST00000260382 LAMC3Q9Y6N6 1575 aa8.61□□□□□ -1.03
LRRC49-201ENST00000260382 ARID3CA6NKF2 412 aa8.61□□□□□ -1.03
LRRC49-201ENST00000260382 FHAD1B1AJZ9 1412 aa8.61□□□□□ -1.03
LRRC49-201ENST00000260382 SPDYE2BA6NHP3 402 aa8.61□□□□□ -1.03
LRRC49-201ENST00000260382 SPDYE6P0CI01 402 aa8.61□□□□□ -1.03
LRRC49-201ENST00000260382 SPDYE2Q495Y8 402 aa8.61□□□□□ -1.03
LRRC49-201ENST00000260382 RAB3GAP2Q9H2M9 1393 aa8.6□□□□□ -1.03
LRRC49-201ENST00000260382 CENPBP07199 599 aaPredicted RBP8.6□□□□□ -1.03
LRRC49-201ENST00000260382 PDS5BQ9NTI5 1447 aa8.6□□□□□ -1.03
LRRC49-201ENST00000260382 GAPVD1Q14C86 1478 aa8.59□□□□□ -1.03
LRRC49-201ENST00000260382 CUL7Q14999 1698 aa8.59□□□□□ -1.03
LRRC49-201ENST00000260382 CTTNBP2Q8WZ74 1663 aa8.59□□□□□ -1.03
LRRC49-201ENST00000260382 GTF3C3Q9Y5Q9 886 aa8.58□□□□□ -1.04
LRRC49-201ENST00000260382 WDR97A6NE52 1622 aa8.57□□□□□ -1.04
LRRC49-201ENST00000260382 CFAP43Q8NDM7 1665 aa8.57□□□□□ -1.04
LRRC49-201ENST00000260382 ABCA5Q8WWZ7 1642 aa8.56□□□□□ -1.04
LRRC49-201ENST00000260382 AQRO60306 1485 aaKnown RBP eCLIP8.55□□□□□ -1.04
LRRC49-201ENST00000260382 FYCO1Q9BQS8 1478 aa8.55□□□□□ -1.04
LRRC49-201ENST00000260382 MTUS2Q5JR59 1369 aa8.55□□□□□ -1.04
LRRC49-201ENST00000260382 SIN3AQ96ST3 1273 aa8.55□□□□□ -1.04
LRRC49-201ENST00000260382 EFCAB5A4FU69 1503 aa8.55□□□□□ -1.04
LRRC49-201ENST00000260382 CASKIN1Q8WXD9 1431 aa8.54□□□□□ -1.04
LRRC49-201ENST00000260382 MAP3K1Q13233 1512 aa8.54□□□□□ -1.04
LRRC49-201ENST00000260382 SETD5Q9C0A6 1442 aa8.53□□□□□ -1.04
LRRC49-201ENST00000260382 CLSPNQ9HAW4 1339 aa8.53□□□□□ -1.04
LRRC49-201ENST00000260382 FMN1Q68DA7 1419 aa8.53□□□□□ -1.04
LRRC49-201ENST00000260382 MAPKBP1O60336 1514 aa8.52□□□□□ -1.05
LRRC49-201ENST00000260382 SNAPC4Q5SXM2 1469 aa8.52□□□□□ -1.05
LRRC49-201ENST00000260382 HIRIP3Q9BW71 556 aaPredicted RBP8.51□□□□□ -1.05
LRRC49-201ENST00000260382 TARBP1Q13395 1621 aaKnown RBP8.51□□□□□ -1.05
LRRC49-201ENST00000260382 LRRIQ1Q96JM4 1722 aa8.5□□□□□ -1.05
LRRC49-201ENST00000260382 ZNF608Q9ULD9 1512 aaPredicted RBP8.49□□□□□ -1.05
LRRC49-201ENST00000260382 PBRM1Q86U86 1689 aa8.49□□□□□ -1.05
LRRC49-201ENST00000260382 FGD6Q6ZV73 1430 aa8.49□□□□□ -1.05
LRRC49-201ENST00000260382 CHIC2Q9UKJ5 165 aa8.49□□□□□ -1.05
LRRC49-201ENST00000260382 SAMD9Q5K651 1589 aa8.48□□□□□ -1.05
LRRC49-201ENST00000260382 MRC2Q9UBG0 1479 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms