RNA–Protein interactions for RNA: ENST00000260382.9

LRRC49-201, Transcript of leucine rich repeat containing 49, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRC49, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-201ENST00000260382 AEBP2Q6ZN18 517 aaPredicted RBP15.22■□□□□ 0.03
LRRC49-201ENST00000260382 CHIC1Q5VXU3 224 aa14.93□□□□□ -0.02
LRRC49-201ENST00000260382 PHF23Q9BUL5 403 aaPredicted RBP13.31□□□□□ -0.28
LRRC49-201ENST00000260382 SENP3Q9H4L4 574 aaPredicted RBP12.66□□□□□ -0.38
LRRC49-201ENST00000260382 NISCHQ9Y2I1 1504 aa12.3□□□□□ -0.44
LRRC49-201ENST00000260382 PLPPR3Q6T4P5 718 aa12.19□□□□□ -0.46
LRRC49-201ENST00000260382 FOXD1Q16676 465 aa11.87□□□□□ -0.51
LRRC49-201ENST00000260382 PPP6R1Q9UPN7 881 aa11.72□□□□□ -0.53
LRRC49-201ENST00000260382 ADRA2BP18089 450 aa11.69□□□□□ -0.54
LRRC49-201ENST00000260382 PIAS4Q8N2W9 510 aaPredicted RBP11.24□□□□□ -0.61
LRRC49-201ENST00000260382 KCNA4P22459 653 aa11□□□□□ -0.65
LRRC49-201ENST00000260382 PPP4R3CPQ6ZMV5 832 aa10.84□□□□□ -0.67
LRRC49-201ENST00000260382 MSH5O43196 834 aa10.65□□□□□ -0.7
LRRC49-201ENST00000260382 SHROOM4Q9ULL8 1493 aa10.64□□□□□ -0.71
LRRC49-201ENST00000260382 EHMT2Q96KQ7 1210 aa10.58□□□□□ -0.72
LRRC49-201ENST00000260382 MAPK8IP2Q13387 824 aaPredicted RBP10.57□□□□□ -0.72
LRRC49-201ENST00000260382 NPM3O75607 178 aaKnown RBP10.53□□□□□ -0.72
LRRC49-201ENST00000260382 NCBP3Q53F19 620 aaKnown RBP10.47□□□□□ -0.73
LRRC49-201ENST00000260382 DCAF8L2P0C7V8 631 aa10.46□□□□□ -0.73
LRRC49-201ENST00000260382 CCDC180Q9P1Z9 1646 aa10.44□□□□□ -0.74
LRRC49-201ENST00000260382 SCAF1Q9H7N4 1312 aaKnown RBP10.41□□□□□ -0.74
LRRC49-201ENST00000260382 SLC4A1APQ9BWU0 796 aaKnown RBP10.41□□□□□ -0.74
LRRC49-201ENST00000260382 CNKSR2Q8WXI2 1034 aa10.4□□□□□ -0.74
LRRC49-201ENST00000260382 ZCCHC6Q5VYS8 1495 aaKnown RBP10.38□□□□□ -0.75
LRRC49-201ENST00000260382 SUPT5HO00267 1087 aaKnown RBP10.37□□□□□ -0.75
LRRC49-201ENST00000260382 CSRNP3Q8WYN3 585 aa10.26□□□□□ -0.77
LRRC49-201ENST00000260382 ZBTB22O15209 634 aa10.18□□□□□ -0.78
LRRC49-201ENST00000260382 DMRT2Q9Y5R5 561 aa10.17□□□□□ -0.78
LRRC49-201ENST00000260382 RNF216Q9NWF9 866 aaPredicted RBP10.14□□□□□ -0.79
LRRC49-201ENST00000260382 HOXD11P31277 338 aaPredicted RBP10.04□□□□□ -0.8
LRRC49-201ENST00000260382 DCAF1Q9Y4B6 1507 aa9.99□□□□□ -0.81
LRRC49-201ENST00000260382 SCRIBQ14160 1630 aa9.94□□□□□ -0.82
LRRC49-201ENST00000260382 ABCC9O60706 1549 aa9.93□□□□□ -0.82
LRRC49-201ENST00000260382 DNAJC5BQ9UF47 199 aa9.92□□□□□ -0.82
LRRC49-201ENST00000260382 SLC4A2P04920 1241 aa9.91□□□□□ -0.82
LRRC49-201ENST00000260382 MYO15BQ96JP2 1530 aa9.91□□□□□ -0.82
LRRC49-201ENST00000260382 FOXD4L1Q9NU39 408 aa9.9□□□□□ -0.82
LRRC49-201ENST00000260382 DCAF8L1A6NGE4 600 aa9.86□□□□□ -0.83
LRRC49-201ENST00000260382 RSF1Q96T23 1441 aaPredicted RBP9.72□□□□□ -0.85
LRRC49-201ENST00000260382 LOC105371045A0A1W2PR82 267 aa9.71□□□□□ -0.85
LRRC49-201ENST00000260382 NACADO15069 1562 aa9.69□□□□□ -0.86
LRRC49-201ENST00000260382 RB1CC1Q8TDY2 1594 aa9.67□□□□□ -0.86
LRRC49-201ENST00000260382 CECR2Q9BXF3 1484 aa9.67□□□□□ -0.86
LRRC49-201ENST00000260382 FAM9AQ8IZU1 332 aaPredicted RBP9.63□□□□□ -0.87
LRRC49-201ENST00000260382 PCGF6Q9BYE7 350 aa9.63□□□□□ -0.87
LRRC49-201ENST00000260382 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.62□□□□□ -0.87
LRRC49-201ENST00000260382 MROH2BQ7Z745 1585 aa9.61□□□□□ -0.87
LRRC49-201ENST00000260382 MYCNP04198 464 aaPredicted RBP9.6□□□□□ -0.87
LRRC49-201ENST00000260382 TRIM41Q8WV44 630 aa9.6□□□□□ -0.87
LRRC49-201ENST00000260382 WIZO95785 1651 aa9.57□□□□□ -0.88
LRRC49-201ENST00000260382 U3KPZ7 1027 aaPredicted RBP9.56□□□□□ -0.88
LRRC49-201ENST00000260382 ATF5Q9Y2D1 282 aaPredicted RBP9.55□□□□□ -0.88
LRRC49-201ENST00000260382 PABPN1Q86U42 306 aaKnown RBP eCLIP9.52□□□□□ -0.89
LRRC49-201ENST00000260382 UNC13AQ9UPW8 1703 aa9.47□□□□□ -0.89
LRRC49-201ENST00000260382 HRCP23327 699 aa9.46□□□□□ -0.9
LRRC49-201ENST00000260382 BAZ1AQ9NRL2 1556 aaPredicted RBP9.45□□□□□ -0.9
LRRC49-201ENST00000260382 POTEDQ86YR6 584 aa9.43□□□□□ -0.9
LRRC49-201ENST00000260382 PPARGC1BQ86YN6 1023 aaKnown RBP9.41□□□□□ -0.9
LRRC49-201ENST00000260382 SMARCA4P51532 1647 aa9.4□□□□□ -0.9
LRRC49-201ENST00000260382 ATXN8OSP0DMR3 200 aa9.4□□□□□ -0.91
LRRC49-201ENST00000260382 ABCC8Q09428 1581 aa9.37□□□□□ -0.91
LRRC49-201ENST00000260382 TOP2AP11388 1531 aaKnown RBP9.36□□□□□ -0.91
LRRC49-201ENST00000260382 TRIM26Q12899 539 aaPredicted RBP9.35□□□□□ -0.91
LRRC49-201ENST00000260382 CCDC88BA6NC98 1476 aa9.35□□□□□ -0.91
LRRC49-201ENST00000260382 BICRAQ9NZM4 1560 aa9.34□□□□□ -0.91
LRRC49-201ENST00000260382 SMARCA2P51531 1590 aa9.32□□□□□ -0.92
LRRC49-201ENST00000260382 SAMD1Q6SPF0 538 aaPredicted RBP9.32□□□□□ -0.92
LRRC49-201ENST00000260382 EIF4G1Q04637 1599 aaKnown RBP9.32□□□□□ -0.92
LRRC49-201ENST00000260382 TTBK1Q5TCY1 1321 aaPredicted RBP9.3□□□□□ -0.92
LRRC49-201ENST00000260382 SPINK5Q9NQ38 1064 aaPredicted RBP9.3□□□□□ -0.92
LRRC49-201ENST00000260382 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.29□□□□□ -0.92
LRRC49-201ENST00000260382 HNRNPUL2Q1KMD3 747 aaKnown RBP9.29□□□□□ -0.92
LRRC49-201ENST00000260382 RNF39Q9H2S5 420 aa9.26□□□□□ -0.93
LRRC49-201ENST00000260382 FKBP8Q14318 412 aa9.24□□□□□ -0.93
LRRC49-201ENST00000260382 SOGA1O94964 1423 aa9.24□□□□□ -0.93
LRRC49-201ENST00000260382 TRHP20396 242 aaPredicted RBP9.21□□□□□ -0.93
LRRC49-201ENST00000260382 RUSC2Q8N2Y8 1516 aa9.21□□□□□ -0.94
LRRC49-201ENST00000260382 ZNF219Q9P2Y4 722 aaPredicted RBP9.2□□□□□ -0.94
LRRC49-201ENST00000260382 BAZ1BQ9UIG0 1483 aaKnown RBP9.19□□□□□ -0.94
LRRC49-201ENST00000260382 UBTFP17480 764 aaKnown RBP9.19□□□□□ -0.94
LRRC49-201ENST00000260382 ATAD2BQ9ULI0 1458 aa9.18□□□□□ -0.94
LRRC49-201ENST00000260382 RANGAP1P46060 587 aaPredicted RBP9.17□□□□□ -0.94
LRRC49-201ENST00000260382 WRNQ14191 1432 aaPredicted RBP eCLIP9.16□□□□□ -0.94
LRRC49-201ENST00000260382 CAPN15O75808 1086 aa9.15□□□□□ -0.94
LRRC49-201ENST00000260382 PEG3Q9GZU2 1588 aa9.14□□□□□ -0.95
LRRC49-201ENST00000260382 CEP162Q5TB80 1403 aa9.14□□□□□ -0.95
LRRC49-201ENST00000260382 SYNJ1O43426 1573 aa9.13□□□□□ -0.95
LRRC49-201ENST00000260382 POLA2Q14181 598 aa9.1□□□□□ -0.95
LRRC49-201ENST00000260382 ABCB7O75027 752 aa9.09□□□□□ -0.95
LRRC49-201ENST00000260382 MKRN4PQ13434 485 aaPredicted RBP9.09□□□□□ -0.95
LRRC49-201ENST00000260382 C1QBPQ07021 282 aaKnown RBP9.07□□□□□ -0.96
LRRC49-201ENST00000260382 TNIKQ9UKE5 1360 aa9.06□□□□□ -0.96
LRRC49-201ENST00000260382 CCER1Q8TC90 406 aaPredicted RBP9.06□□□□□ -0.96
LRRC49-201ENST00000260382 GOLGA3Q08378 1498 aa9.06□□□□□ -0.96
LRRC49-201ENST00000260382 EEA1Q15075 1411 aa9.05□□□□□ -0.96
LRRC49-201ENST00000260382 ZEB1P37275 1124 aaPredicted RBP9.05□□□□□ -0.96
LRRC49-201ENST00000260382 APLP2Q06481 763 aa9.04□□□□□ -0.96
LRRC49-201ENST00000260382 RAPGEF2Q9Y4G8 1499 aa9.01□□□□□ -0.97
LRRC49-201ENST00000260382 CEP164Q9UPV0 1460 aa9□□□□□ -0.97
LRRC49-201ENST00000260382 CLIP1P30622 1438 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms