RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 CTTNBP2Q8WZ74 1663 aa15.07■□□□□ 0
NIP7-202ENST00000254941 CLIP1P30622 1438 aa15.05■□□□□ 0
NIP7-202ENST00000254941 SNAPC4Q5SXM2 1469 aa15.05■□□□□ -0
NIP7-202ENST00000254941 MAGI1Q96QZ7 1491 aaPredicted RBP15.05■□□□□ -0
NIP7-202ENST00000254941 SYNJ2O15056 1496 aa14.98□□□□□ -0.01
NIP7-202ENST00000254941 GRIN2AQ12879 1464 aa14.97□□□□□ -0.01
NIP7-202ENST00000254941 RANGAP1P46060 587 aaPredicted RBP14.96□□□□□ -0.01
NIP7-202ENST00000254941 ARHGAP35Q9NRY4 1499 aa14.95□□□□□ -0.02
NIP7-202ENST00000254941 ARAP1Q96P48 1450 aa14.93□□□□□ -0.02
NIP7-202ENST00000254941 CHMP7Q8WUX9 453 aaPredicted RBP14.92□□□□□ -0.02
NIP7-202ENST00000254941 VPS8Q8N3P4 1428 aa14.92□□□□□ -0.02
NIP7-202ENST00000254941 EFCAB5A4FU69 1503 aa14.91□□□□□ -0.02
NIP7-202ENST00000254941 IQGAP2Q13576 1575 aa14.91□□□□□ -0.02
NIP7-202ENST00000254941 KIAA0586Q9BVV6 1533 aa14.88□□□□□ -0.03
NIP7-202ENST00000254941 SAMD9Q5K651 1589 aa14.88□□□□□ -0.03
NIP7-202ENST00000254941 CEP170Q5SW79 1584 aa14.88□□□□□ -0.03
NIP7-202ENST00000254941 CHD1O14646 1710 aa14.88□□□□□ -0.03
NIP7-202ENST00000254941 FBLN2P98095 1184 aa14.87□□□□□ -0.03
NIP7-202ENST00000254941 NUP160Q12769 1436 aa14.87□□□□□ -0.03
NIP7-202ENST00000254941 UGGT2Q9NYU1 1516 aa14.84□□□□□ -0.03
NIP7-202ENST00000254941 FHOD3Q2V2M9 1422 aa14.8□□□□□ -0.04
NIP7-202ENST00000254941 P3H3Q8IVL6 736 aa14.79□□□□□ -0.04
NIP7-202ENST00000254941 FMN1Q68DA7 1419 aa14.77□□□□□ -0.05
NIP7-202ENST00000254941 DISP1Q96F81 1524 aa14.76□□□□□ -0.05
NIP7-202ENST00000254941 KIAA0556O60303 1618 aa14.76□□□□□ -0.05
NIP7-202ENST00000254941 PLPPR3Q6T4P5 718 aa14.74□□□□□ -0.05
NIP7-202ENST00000254941 PCF11O94913 1555 aaKnown RBP14.74□□□□□ -0.05
NIP7-202ENST00000254941 APLP2Q06481 763 aa14.74□□□□□ -0.05
NIP7-202ENST00000254941 JPH4Q96JJ6 628 aa14.74□□□□□ -0.05
NIP7-202ENST00000254941 PPARGC1BQ86YN6 1023 aaKnown RBP14.73□□□□□ -0.05
NIP7-202ENST00000254941 FYCO1Q9BQS8 1478 aa14.72□□□□□ -0.05
NIP7-202ENST00000254941 CASKIN1Q8WXD9 1431 aa14.72□□□□□ -0.05
NIP7-202ENST00000254941 TRIM26Q12899 539 aaPredicted RBP14.71□□□□□ -0.05
NIP7-202ENST00000254941 MAP3K1Q13233 1512 aa14.71□□□□□ -0.05
NIP7-202ENST00000254941 SHROOM2Q13796 1616 aa14.7□□□□□ -0.06
NIP7-202ENST00000254941 PPP6R1Q9UPN7 881 aa14.7□□□□□ -0.06
NIP7-202ENST00000254941 CARMIL2Q6F5E8 1435 aa14.69□□□□□ -0.06
NIP7-202ENST00000254941 CLASP1Q7Z460 1538 aa14.69□□□□□ -0.06
NIP7-202ENST00000254941 ADRA2BP18089 450 aa14.68□□□□□ -0.06
NIP7-202ENST00000254941 CFAP43Q8NDM7 1665 aa14.68□□□□□ -0.06
NIP7-202ENST00000254941 TIAM1Q13009 1591 aa14.68□□□□□ -0.06
NIP7-202ENST00000254941 LRRIQ1Q96JM4 1722 aa14.67□□□□□ -0.06
NIP7-202ENST00000254941 PCGF6Q9BYE7 350 aa14.65□□□□□ -0.06
NIP7-202ENST00000254941 PRG4Q92954 1404 aaPredicted RBP14.64□□□□□ -0.07
NIP7-202ENST00000254941 HECW1Q76N89 1606 aa14.63□□□□□ -0.07
NIP7-202ENST00000254941 KANK4Q5T7N3 995 aaPredicted RBP14.63□□□□□ -0.07
NIP7-202ENST00000254941 TTBK1Q5TCY1 1321 aaPredicted RBP14.62□□□□□ -0.07
NIP7-202ENST00000254941 ATP1B4Q9UN42 357 aaPredicted RBP14.61□□□□□ -0.07
NIP7-202ENST00000254941 RAPGEF6Q8TEU7 1601 aa14.61□□□□□ -0.07
NIP7-202ENST00000254941 LRRC9Q6ZRR7 1453 aa14.6□□□□□ -0.07
NIP7-202ENST00000254941 CCDC18Q5T9S5 1454 aa14.59□□□□□ -0.07
NIP7-202ENST00000254941 EPRSP07814 1512 aaKnown RBP14.57□□□□□ -0.08
NIP7-202ENST00000254941 ERCC6L2Q5T890 1561 aa14.57□□□□□ -0.08
NIP7-202ENST00000254941 OSCARQ8IYS5 282 aa14.57□□□□□ -0.08
NIP7-202ENST00000254941 PLB1Q6P1J6 1458 aa14.56□□□□□ -0.08
NIP7-202ENST00000254941 NUP153P49790 1475 aaKnown RBP14.55□□□□□ -0.08
NIP7-202ENST00000254941 ABCA8O94911 1581 aa14.55□□□□□ -0.08
NIP7-202ENST00000254941 PTPRGP23470 1445 aa14.55□□□□□ -0.08
NIP7-202ENST00000254941 CDK13Q14004 1512 aaKnown RBP14.52□□□□□ -0.09
NIP7-202ENST00000254941 EHBP1L1Q8N3D4 1523 aa14.5□□□□□ -0.09
NIP7-202ENST00000254941 MTUS2Q5JR59 1369 aa14.5□□□□□ -0.09
NIP7-202ENST00000254941 MAGI3Q5TCQ9 1506 aa14.5□□□□□ -0.09
NIP7-202ENST00000254941 SUPT6HQ7KZ85 1726 aaKnown RBP14.48□□□□□ -0.09
NIP7-202ENST00000254941 UACAQ9BZF9 1416 aa14.47□□□□□ -0.09
NIP7-202ENST00000254941 RRBP1Q9P2E9 1410 aaKnown RBP14.47□□□□□ -0.09
NIP7-202ENST00000254941 ARID3CA6NKF2 412 aa14.45□□□□□ -0.1
NIP7-202ENST00000254941 PHLDB1Q86UU1 1377 aa14.45□□□□□ -0.1
NIP7-202ENST00000254941 ATP10BO94823 1461 aa14.44□□□□□ -0.1
NIP7-202ENST00000254941 ABCC2Q92887 1545 aa14.44□□□□□ -0.1
NIP7-202ENST00000254941 CDK11AQ9UQ88 783 aaPredicted RBP14.44□□□□□ -0.1
NIP7-202ENST00000254941 ARHGEF11O15085 1522 aa14.43□□□□□ -0.1
NIP7-202ENST00000254941 NCOA2Q15596 1464 aa14.43□□□□□ -0.1
NIP7-202ENST00000254941 UHRF1BP1LA0JNW5 1464 aa14.42□□□□□ -0.1
NIP7-202ENST00000254941 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.41□□□□□ -0.1
NIP7-202ENST00000254941 HNRNPUL2Q1KMD3 747 aaKnown RBP14.41□□□□□ -0.1
NIP7-202ENST00000254941 CCNB3Q8WWL7 1395 aa14.41□□□□□ -0.1
NIP7-202ENST00000254941 TROQ12816 1431 aaPredicted RBP14.4□□□□□ -0.1
NIP7-202ENST00000254941 ADCY10Q96PN6 1610 aa14.39□□□□□ -0.11
NIP7-202ENST00000254941 MYOM3Q5VTT5 1437 aa14.37□□□□□ -0.11
NIP7-202ENST00000254941 KDM5BQ9UGL1 1544 aa14.36□□□□□ -0.11
NIP7-202ENST00000254941 FGD6Q6ZV73 1430 aa14.36□□□□□ -0.11
NIP7-202ENST00000254941 ZCCHC11Q5TAX3 1644 aaKnown RBP14.36□□□□□ -0.11
NIP7-202ENST00000254941 PLEKHD1A6NEE1 506 aa14.35□□□□□ -0.11
NIP7-202ENST00000254941 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.35□□□□□ -0.11
NIP7-202ENST00000254941 KIF14Q15058 1648 aa14.35□□□□□ -0.11
NIP7-202ENST00000254941 ITSN2Q9NZM3 1697 aa14.31□□□□□ -0.12
NIP7-202ENST00000254941 MIA2Q96PC5 1412 aa14.31□□□□□ -0.12
NIP7-202ENST00000254941 PTPN23Q9H3S7 1636 aa14.31□□□□□ -0.12
NIP7-202ENST00000254941 FAM50AQ14320 339 aaKnown RBP14.29□□□□□ -0.12
NIP7-202ENST00000254941 ABCC10Q5T3U5 1492 aa14.29□□□□□ -0.12
NIP7-202ENST00000254941 CDC42BPAQ5VT25 1732 aa14.29□□□□□ -0.12
NIP7-202ENST00000254941 TCOF1Q13428 1488 aaKnown RBP14.28□□□□□ -0.12
NIP7-202ENST00000254941 RIMBP3CA6NJZ7 1639 aa14.28□□□□□ -0.12
NIP7-202ENST00000254941 RIMBP3BA6NNM3 1639 aa14.28□□□□□ -0.12
NIP7-202ENST00000254941 RIMBP3Q9UFD9 1639 aa14.28□□□□□ -0.12
NIP7-202ENST00000254941 GPATCH8Q9UKJ3 1502 aaKnown RBP14.27□□□□□ -0.13
NIP7-202ENST00000254941 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.23□□□□□ -0.13
NIP7-202ENST00000254941 ITGAEP38570 1179 aa14.23□□□□□ -0.13
NIP7-202ENST00000254941 TTC37Q6PGP7 1564 aa14.22□□□□□ -0.13
NIP7-202ENST00000254941 CDC42BPBQ9Y5S2 1711 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms