RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 FGD1P98174 961 aa21.72■■□□□ 1.07
PMPCB-201ENST00000249269 RUSC2Q8N2Y8 1516 aa21.72■■□□□ 1.07
PMPCB-201ENST00000249269 CLIP1P30622 1438 aa21.72■■□□□ 1.07
PMPCB-201ENST00000249269 BRD2P25440 801 aaKnown RBP21.68■■□□□ 1.06
PMPCB-201ENST00000249269 SYNJ1O43426 1573 aa21.64■■□□□ 1.06
PMPCB-201ENST00000249269 TMEM132AQ24JP5 1023 aa21.62■■□□□ 1.05
PMPCB-201ENST00000249269 ERICH3Q5RHP9 1530 aa21.62■■□□□ 1.05
PMPCB-201ENST00000249269 BICRAQ9NZM4 1560 aa21.58■■□□□ 1.04
PMPCB-201ENST00000249269 TOP2BQ02880 1626 aa21.54■■□□□ 1.04
PMPCB-201ENST00000249269 BIVM-ERCC5R4GMW8 1640 aa21.52■■□□□ 1.04
PMPCB-201ENST00000249269 MIER1Q8N108 512 aa21.52■■□□□ 1.04
PMPCB-201ENST00000249269 CNKSR2Q8WXI2 1034 aa21.51■■□□□ 1.03
PMPCB-201ENST00000249269 PLCB2Q00722 1185 aa21.5■■□□□ 1.03
PMPCB-201ENST00000249269 ATAD2BQ9ULI0 1458 aa21.49■■□□□ 1.03
PMPCB-201ENST00000249269 CUX2O14529 1486 aa21.49■■□□□ 1.03
PMPCB-201ENST00000249269 RAPGEF2Q9Y4G8 1499 aa21.45■■□□□ 1.02
PMPCB-201ENST00000249269 PRXQ9BXM0 1461 aa21.42■■□□□ 1.02
PMPCB-201ENST00000249269 RRBP1Q9P2E9 1410 aaKnown RBP21.41■■□□□ 1.02
PMPCB-201ENST00000249269 HNRNPUL2Q1KMD3 747 aaKnown RBP21.4■■□□□ 1.02
PMPCB-201ENST00000249269 CDK11BP21127 795 aaKnown RBP21.39■■□□□ 1.02
PMPCB-201ENST00000249269 CDK11AQ9UQ88 783 aaPredicted RBP21.39■■□□□ 1.02
PMPCB-201ENST00000249269 DHX57Q6P158 1386 aaKnown RBP21.39■■□□□ 1.01
PMPCB-201ENST00000249269 SALL2Q9Y467 1007 aaPredicted RBP21.38■■□□□ 1.01
PMPCB-201ENST00000249269 CCDC136Q96JN2 1154 aa21.34■■□□□ 1.01
PMPCB-201ENST00000249269 YTHDC1Q96MU7 727 aaKnown RBP21.32■■□□□ 1
PMPCB-201ENST00000249269 ARAP1Q96P48 1450 aa21.31■■□□□ 1
PMPCB-201ENST00000249269 MAP3K1Q13233 1512 aa21.31■■□□□ 1
PMPCB-201ENST00000249269 AAMPQ13685 434 aa21.29■■□□□ 1
PMPCB-201ENST00000249269 A0A0U1RQG5 324 aaPredicted RBP21.26■□□□□ 0.99
PMPCB-201ENST00000249269 HMGXB3Q12766 1538 aa21.24■□□□□ 0.99
PMPCB-201ENST00000249269 KIF27Q86VH2 1401 aa21.21■□□□□ 0.99
PMPCB-201ENST00000249269 RSPH4AQ5TD94 716 aa21.19■□□□□ 0.98
PMPCB-201ENST00000249269 CCNB3Q8WWL7 1395 aa21.16■□□□□ 0.98
PMPCB-201ENST00000249269 PAXIP1Q6ZW49 1069 aaPredicted RBP21.16■□□□□ 0.98
PMPCB-201ENST00000249269 ERICH6BQ5W0A0 696 aa21.15■□□□□ 0.98
PMPCB-201ENST00000249269 SUPT16HQ9Y5B9 1047 aaKnown RBP21.14■□□□□ 0.97
PMPCB-201ENST00000249269 RSPH6AQ9H0K4 717 aa21.13■□□□□ 0.97
PMPCB-201ENST00000249269 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
PMPCB-201ENST00000249269 HSP90B1P14625 803 aaKnown RBP21.13■□□□□ 0.97
PMPCB-201ENST00000249269 PPP6R1Q9UPN7 881 aa21.13■□□□□ 0.97
PMPCB-201ENST00000249269 IGSF3O75054 1194 aa21.09■□□□□ 0.97
PMPCB-201ENST00000249269 CUX1P39880 1505 aa21.07■□□□□ 0.96
PMPCB-201ENST00000249269 PABPN1Q86U42 306 aaKnown RBP eCLIP21.06■□□□□ 0.96
PMPCB-201ENST00000249269 ARHGAP35Q9NRY4 1499 aa21.05■□□□□ 0.96
PMPCB-201ENST00000249269 PRDM2Q13029 1718 aa21.05■□□□□ 0.96
PMPCB-201ENST00000249269 CFTRP13569 1480 aa21.03■□□□□ 0.96
PMPCB-201ENST00000249269 TIAM1Q13009 1591 aa21.02■□□□□ 0.96
PMPCB-201ENST00000249269 RBM10P98175 930 aaKnown RBP21.01■□□□□ 0.95
PMPCB-201ENST00000249269 KANK4Q5T7N3 995 aaPredicted RBP21.01■□□□□ 0.95
PMPCB-201ENST00000249269 ZNF326Q5BKZ1 582 aaKnown RBP21.01■□□□□ 0.95
PMPCB-201ENST00000249269 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.98■□□□□ 0.95
PMPCB-201ENST00000249269 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.98■□□□□ 0.95
PMPCB-201ENST00000249269 MAPKBP1O60336 1514 aa20.98■□□□□ 0.95
PMPCB-201ENST00000249269 SETD5Q9C0A6 1442 aa20.96■□□□□ 0.95
PMPCB-201ENST00000249269 NAP1L5Q96NT1 182 aaPredicted RBP20.95■□□□□ 0.94
PMPCB-201ENST00000249269 BCCIPQ9P287 314 aaKnown RBP eCLIP20.95■□□□□ 0.94
PMPCB-201ENST00000249269 FHAD1B1AJZ9 1412 aa20.94■□□□□ 0.94
PMPCB-201ENST00000249269 IRX6P78412 446 aaPredicted RBP20.94■□□□□ 0.94
PMPCB-201ENST00000249269 RAB3GAP2Q9H2M9 1393 aa20.93■□□□□ 0.94
PMPCB-201ENST00000249269 CFAP43Q8NDM7 1665 aa20.92■□□□□ 0.94
PMPCB-201ENST00000249269 LRRC9Q6ZRR7 1453 aa20.9■□□□□ 0.94
PMPCB-201ENST00000249269 TSHZ2Q9NRE2 1034 aa20.89■□□□□ 0.93
PMPCB-201ENST00000249269 CCER2I3L3R5 266 aa20.88■□□□□ 0.93
PMPCB-201ENST00000249269 POLR3GLQ9BT43 218 aa20.85■□□□□ 0.93
PMPCB-201ENST00000249269 DEKP35659 375 aaKnown RBP20.85■□□□□ 0.93
PMPCB-201ENST00000249269 CFAP44Q96MT7 982 aa20.84■□□□□ 0.93
PMPCB-201ENST00000249269 AQRO60306 1485 aaKnown RBP eCLIP20.84■□□□□ 0.933e-6■■■□□ 17
PMPCB-201ENST00000249269 IGF1RP08069 1367 aa20.82■□□□□ 0.92
PMPCB-201ENST00000249269 EFCAB5A4FU69 1503 aa20.81■□□□□ 0.92
PMPCB-201ENST00000249269 ZMYND15Q9H091 742 aa20.79■□□□□ 0.92
PMPCB-201ENST00000249269 FYCO1Q9BQS8 1478 aa20.76■□□□□ 0.91
PMPCB-201ENST00000249269 PPP1R15AO75807 674 aaPredicted RBP20.75■□□□□ 0.91
PMPCB-201ENST00000249269 CARMIL1Q5VZK9 1371 aa20.75■□□□□ 0.91
PMPCB-201ENST00000249269 WDR97A6NE52 1622 aa20.74■□□□□ 0.91
PMPCB-201ENST00000249269 GLIPR1L2Q4G1C9 344 aa20.73■□□□□ 0.91
PMPCB-201ENST00000249269 HMGB1P09429 215 aaKnown RBP20.71■□□□□ 0.91
PMPCB-201ENST00000249269 FGD5Q6ZNL6 1462 aa20.7■□□□□ 0.9
PMPCB-201ENST00000249269 PHLDB1Q86UU1 1377 aa20.69■□□□□ 0.9
PMPCB-201ENST00000249269 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.69■□□□□ 0.9
PMPCB-201ENST00000249269 CASKIN1Q8WXD9 1431 aa20.69■□□□□ 0.9
PMPCB-201ENST00000249269 CC2D2AQ9P2K1 1620 aa20.67■□□□□ 0.9
PMPCB-201ENST00000249269 KDM2AQ9Y2K7 1162 aa20.66■□□□□ 0.9
PMPCB-201ENST00000249269 PCF11O94913 1555 aaKnown RBP20.66■□□□□ 0.9
PMPCB-201ENST00000249269 CCDC9Q9Y3X0 531 aaKnown RBP20.66■□□□□ 0.9
PMPCB-201ENST00000249269 ANP32CO43423 234 aa20.64■□□□□ 0.9
PMPCB-201ENST00000249269 CADPSQ9ULU8 1353 aa20.64■□□□□ 0.89
PMPCB-201ENST00000249269 CUL7Q14999 1698 aa20.64■□□□□ 0.89
PMPCB-201ENST00000249269 VSIG10Q8N0Z9 540 aa20.63■□□□□ 0.89
PMPCB-201ENST00000249269 FMN1Q68DA7 1419 aa20.59■□□□□ 0.89
PMPCB-201ENST00000249269 THOC2Q8NI27 1593 aaKnown RBP20.59■□□□□ 0.89
PMPCB-201ENST00000249269 UACAQ9BZF9 1416 aa20.59■□□□□ 0.89
PMPCB-201ENST00000249269 FKBP8Q14318 412 aa20.59■□□□□ 0.89
PMPCB-201ENST00000249269 DDX10Q13206 875 aaKnown RBP20.58■□□□□ 0.89
PMPCB-201ENST00000249269 HFM1A2PYH4 1435 aa20.58■□□□□ 0.88
PMPCB-201ENST00000249269 ABCA10Q8WWZ4 1543 aa20.56■□□□□ 0.88
PMPCB-201ENST00000249269 MYT1LQ9UL68 1186 aa20.55■□□□□ 0.88
PMPCB-201ENST00000249269 CTTNBP2Q8WZ74 1663 aa20.55■□□□□ 0.88
PMPCB-201ENST00000249269 ITGAEP38570 1179 aa20.55■□□□□ 0.88
PMPCB-201ENST00000249269 BRPF3Q9ULD4 1205 aa20.54■□□□□ 0.88
PMPCB-201ENST00000249269 FGD6Q6ZV73 1430 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms