RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 ARAP1Q96P48 1450 aa36.57■■■■□ 3.44
SYNGR3-201ENST00000248121 ARHGAP35Q9NRY4 1499 aa36.56■■■■□ 3.44
SYNGR3-201ENST00000248121 MAGI1Q96QZ7 1491 aaPredicted RBP36.54■■■■□ 3.44
SYNGR3-201ENST00000248121 VPS8Q8N3P4 1428 aa36.46■■■■□ 3.43
SYNGR3-201ENST00000248121 GRIN2AQ12879 1464 aa36.45■■■■□ 3.43
SYNGR3-201ENST00000248121 SYNJ2O15056 1496 aa36.43■■■■□ 3.42
SYNGR3-201ENST00000248121 HRCP23327 699 aa36.39■■■■□ 3.42
SYNGR3-201ENST00000248121 IQGAP2Q13576 1575 aa36.33■■■■□ 3.41
SYNGR3-201ENST00000248121 CEP170Q5SW79 1584 aa36.32■■■■□ 3.41
SYNGR3-201ENST00000248121 FBLN2P98095 1184 aa36.31■■■■□ 3.4
SYNGR3-201ENST00000248121 P3H3Q8IVL6 736 aa36.31■■■■□ 3.4
SYNGR3-201ENST00000248121 CHMP7Q8WUX9 453 aaPredicted RBP36.31■■■■□ 3.4
SYNGR3-201ENST00000248121 EFCAB5A4FU69 1503 aa36.28■■■■□ 3.4
SYNGR3-201ENST00000248121 SAMD9Q5K651 1589 aa36.28■■■■□ 3.4
SYNGR3-201ENST00000248121 FHOD3Q2V2M9 1422 aa36.27■■■■□ 3.4
SYNGR3-201ENST00000248121 CHD1O14646 1710 aa36.26■■■■□ 3.4
SYNGR3-201ENST00000248121 KIAA0586Q9BVV6 1533 aa36.19■■■■□ 3.38
SYNGR3-201ENST00000248121 TTBK1Q5TCY1 1321 aaPredicted RBP36.17■■■■□ 3.38
SYNGR3-201ENST00000248121 NUP160Q12769 1436 aa36.17■■■■□ 3.38
SYNGR3-201ENST00000248121 UGGT2Q9NYU1 1516 aa36.1■■■■□ 3.37
SYNGR3-201ENST00000248121 PCF11O94913 1555 aaKnown RBP36.1■■■■□ 3.37
SYNGR3-201ENST00000248121 DISP1Q96F81 1524 aa36.01■■■■□ 3.36
SYNGR3-201ENST00000248121 KIAA0556O60303 1618 aa36■■■■□ 3.35
SYNGR3-201ENST00000248121 APLP2Q06481 763 aa35.93■■■■□ 3.34
SYNGR3-201ENST00000248121 FMN1Q68DA7 1419 aa35.91■■■■□ 3.34
SYNGR3-201ENST00000248121 LRRIQ1Q96JM4 1722 aa35.9■■■■□ 3.34
SYNGR3-201ENST00000248121 KANK4Q5T7N3 995 aaPredicted RBP35.88■■■■□ 3.34
SYNGR3-201ENST00000248121 FYCO1Q9BQS8 1478 aa35.88■■■■□ 3.33
SYNGR3-201ENST00000248121 CASKIN1Q8WXD9 1431 aa35.88■■■■□ 3.33
SYNGR3-201ENST00000248121 TIAM1Q13009 1591 aa35.87■■■■□ 3.33
SYNGR3-201ENST00000248121 JPH4Q96JJ6 628 aa35.85■■■■□ 3.33
SYNGR3-201ENST00000248121 CFAP43Q8NDM7 1665 aa35.85■■■■□ 3.33
SYNGR3-201ENST00000248121 ATP1B4Q9UN42 357 aaPredicted RBP35.82■■■■□ 3.33
SYNGR3-201ENST00000248121 MAP3K1Q13233 1512 aa35.75■■■■□ 3.31
SYNGR3-201ENST00000248121 SHROOM2Q13796 1616 aa35.75■■■■□ 3.31
SYNGR3-201ENST00000248121 CLASP1Q7Z460 1538 aa35.73■■■■□ 3.31
SYNGR3-201ENST00000248121 PRG4Q92954 1404 aaPredicted RBP35.69■■■■□ 3.3
SYNGR3-201ENST00000248121 CARMIL2Q6F5E8 1435 aa35.68■■■■□ 3.3
SYNGR3-201ENST00000248121 LRRC9Q6ZRR7 1453 aa35.67■■■■□ 3.3
SYNGR3-201ENST00000248121 HECW1Q76N89 1606 aa35.66■■■■□ 3.3
SYNGR3-201ENST00000248121 ERCC6L2Q5T890 1561 aa35.65■■■■□ 3.3
SYNGR3-201ENST00000248121 RAPGEF6Q8TEU7 1601 aa35.61■■■■□ 3.29
SYNGR3-201ENST00000248121 PLB1Q6P1J6 1458 aa35.58■■■■□ 3.29
SYNGR3-201ENST00000248121 CDK13Q14004 1512 aaKnown RBP35.58■■■■□ 3.29
SYNGR3-201ENST00000248121 ARID3CA6NKF2 412 aa35.55■■■■□ 3.28
SYNGR3-201ENST00000248121 EPRSP07814 1512 aaKnown RBP35.54■■■■□ 3.28
SYNGR3-201ENST00000248121 NUP153P49790 1475 aaKnown RBP35.53■■■■□ 3.28
SYNGR3-201ENST00000248121 ZEB1P37275 1124 aaPredicted RBP35.53■■■■□ 3.28
SYNGR3-201ENST00000248121 MAGI3Q5TCQ9 1506 aa35.52■■■■□ 3.28
SYNGR3-201ENST00000248121 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.51■■■■□ 3.28
SYNGR3-201ENST00000248121 CCDC18Q5T9S5 1454 aa35.49■■■■□ 3.27
SYNGR3-201ENST00000248121 ABCA8O94911 1581 aa35.46■■■■□ 3.27
SYNGR3-201ENST00000248121 PHLDB1Q86UU1 1377 aa35.4■■■■□ 3.26
SYNGR3-201ENST00000248121 PTPRGP23470 1445 aa35.39■■■■□ 3.26
SYNGR3-201ENST00000248121 MTUS2Q5JR59 1369 aa35.39■■■■□ 3.26
SYNGR3-201ENST00000248121 HNRNPUL2Q1KMD3 747 aaKnown RBP35.39■■■■□ 3.26
SYNGR3-201ENST00000248121 EHBP1L1Q8N3D4 1523 aa35.37■■■■□ 3.25
SYNGR3-201ENST00000248121 RRBP1Q9P2E9 1410 aaKnown RBP35.37■■■■□ 3.25
SYNGR3-201ENST00000248121 CCER1Q8TC90 406 aaPredicted RBP35.34■■■■□ 3.25
SYNGR3-201ENST00000248121 OSCARQ8IYS5 282 aa35.31■■■■□ 3.24
SYNGR3-201ENST00000248121 SUPT6HQ7KZ85 1726 aaKnown RBP35.3■■■■□ 3.24
SYNGR3-201ENST00000248121 NCOA2Q15596 1464 aa35.26■■■■□ 3.24
SYNGR3-201ENST00000248121 CCNB3Q8WWL7 1395 aa35.22■■■■□ 3.23
SYNGR3-201ENST00000248121 ARHGEF11O15085 1522 aa35.22■■■■□ 3.23
SYNGR3-201ENST00000248121 ATP10BO94823 1461 aa35.21■■■■□ 3.23
SYNGR3-201ENST00000248121 UACAQ9BZF9 1416 aa35.21■■■■□ 3.23
SYNGR3-201ENST00000248121 ABCC2Q92887 1545 aa35.15■■■■□ 3.22
SYNGR3-201ENST00000248121 KIF14Q15058 1648 aa35.1■■■■□ 3.21
SYNGR3-201ENST00000248121 TROQ12816 1431 aaPredicted RBP35.08■■■■□ 3.21
SYNGR3-201ENST00000248121 FGD6Q6ZV73 1430 aa35.08■■■■□ 3.21
SYNGR3-201ENST00000248121 MYOM3Q5VTT5 1437 aa35.08■■■■□ 3.21
SYNGR3-201ENST00000248121 ADCY10Q96PN6 1610 aa35.04■■■■□ 3.2
SYNGR3-201ENST00000248121 CDK11AQ9UQ88 783 aaPredicted RBP35.02■■■■□ 3.2
SYNGR3-201ENST00000248121 FAM50AQ14320 339 aaKnown RBP35.01■■■■□ 3.19
SYNGR3-201ENST00000248121 ZCCHC11Q5TAX3 1644 aaKnown RBP35■■■■□ 3.19
SYNGR3-201ENST00000248121 ITGAEP38570 1179 aa34.99■■■■□ 3.19
SYNGR3-201ENST00000248121 UHRF1BP1LA0JNW5 1464 aa34.99■■■■□ 3.19
SYNGR3-201ENST00000248121 PTPN23Q9H3S7 1636 aa34.97■■■■□ 3.19
SYNGR3-201ENST00000248121 PLEKHD1A6NEE1 506 aa34.92■■■■□ 3.18
SYNGR3-201ENST00000248121 KDM5BQ9UGL1 1544 aa34.91■■■■□ 3.18
SYNGR3-201ENST00000248121 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.86■■■■□ 3.17
SYNGR3-201ENST00000248121 ABCC10Q5T3U5 1492 aa34.85■■■■□ 3.17
SYNGR3-201ENST00000248121 CDC42BPAQ5VT25 1732 aa34.85■■■■□ 3.17
SYNGR3-201ENST00000248121 TCOF1Q13428 1488 aaKnown RBP34.84■■■■□ 3.17
SYNGR3-201ENST00000248121 ITSN2Q9NZM3 1697 aa34.83■■■■□ 3.17
SYNGR3-201ENST00000248121 GPATCH8Q9UKJ3 1502 aaKnown RBP34.82■■■■□ 3.16
SYNGR3-201ENST00000248121 MIA2Q96PC5 1412 aa34.81■■■■□ 3.16
SYNGR3-201ENST00000248121 PTPRKQ15262 1439 aa34.78■■■■□ 3.16
SYNGR3-201ENST00000248121 TTC37Q6PGP7 1564 aa34.76■■■■□ 3.16
SYNGR3-201ENST00000248121 DHX57Q6P158 1386 aaKnown RBP34.76■■■■□ 3.15
SYNGR3-201ENST00000248121 RIMBP3CA6NJZ7 1639 aa34.76■■■■□ 3.15
SYNGR3-201ENST00000248121 RIMBP3BA6NNM3 1639 aa34.76■■■■□ 3.15
SYNGR3-201ENST00000248121 RIMBP3Q9UFD9 1639 aa34.76■■■■□ 3.15
SYNGR3-201ENST00000248121 ZNF644Q9H582 1327 aaPredicted RBP34.74■■■■□ 3.15
SYNGR3-201ENST00000248121 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.72■■■■□ 3.15
SYNGR3-201ENST00000248121 CDC42BPBQ9Y5S2 1711 aa34.68■■■■□ 3.14
SYNGR3-201ENST00000248121 CAMSAP2Q08AD1 1489 aa34.67■■■■□ 3.14
SYNGR3-201ENST00000248121 RAB3GAP2Q9H2M9 1393 aa34.66■■■■□ 3.14
SYNGR3-201ENST00000248121 KCNH8Q96L42 1107 aa34.66■■■■□ 3.14
SYNGR3-201ENST00000248121 PREX2Q70Z35 1606 aa34.65■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms