RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 FANCD2Q9BXW9 1451 aa21.8■■□□□ 1.08
SIN3B-201ENST00000248054 CNGB1Q14028 1251 aaPredicted RBP21.8■■□□□ 1.08
SIN3B-201ENST00000248054 SLC4A1APQ9BWU0 796 aaKnown RBP21.78■■□□□ 1.08
SIN3B-201ENST00000248054 CCNB3Q8WWL7 1395 aa21.78■■□□□ 1.08
SIN3B-201ENST00000248054 FMN1Q68DA7 1419 aa21.76■■□□□ 1.07
SIN3B-201ENST00000248054 RTL5Q5HYW3 569 aaPredicted RBP21.76■■□□□ 1.07
SIN3B-201ENST00000248054 HMGXB3Q12766 1538 aa21.75■■□□□ 1.07
SIN3B-201ENST00000248054 TDRD9Q8NDG6 1382 aaKnown RBP21.7■■□□□ 1.06
SIN3B-201ENST00000248054 CFDP1Q9UEE9 299 aaPredicted RBP21.69■■□□□ 1.06
SIN3B-201ENST00000248054 MIER1Q8N108 512 aa21.68■■□□□ 1.06
SIN3B-201ENST00000248054 CARMIL2Q6F5E8 1435 aa21.67■■□□□ 1.06
SIN3B-201ENST00000248054 RRP7BPQ9NSQ0 103 aa21.65■■□□□ 1.06
SIN3B-201ENST00000248054 ARHGAP35Q9NRY4 1499 aa21.65■■□□□ 1.06
SIN3B-201ENST00000248054 BICRAQ9NZM4 1560 aa21.62■■□□□ 1.05
SIN3B-201ENST00000248054 CFTRP13569 1480 aa21.62■■□□□ 1.05
SIN3B-201ENST00000248054 RUSC2Q8N2Y8 1516 aa21.61■■□□□ 1.05
SIN3B-201ENST00000248054 FGD5Q6ZNL6 1462 aa21.58■■□□□ 1.05
SIN3B-201ENST00000248054 TIMELESSQ9UNS1 1208 aa21.57■■□□□ 1.04
SIN3B-201ENST00000248054 ESF1Q9H501 851 aaKnown RBP21.56■■□□□ 1.04
SIN3B-201ENST00000248054 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.55■■□□□ 1.049e-7■■■□□ 19
SIN3B-201ENST00000248054 DDX10Q13206 875 aaKnown RBP21.53■■□□□ 1.04
SIN3B-201ENST00000248054 KCNH8Q96L42 1107 aa21.52■■□□□ 1.04
SIN3B-201ENST00000248054 SETD5Q9C0A6 1442 aa21.51■■□□□ 1.03
SIN3B-201ENST00000248054 EIF4G2P78344 907 aaKnown RBP eCLIP21.51■■□□□ 1.038e-7■■■■■ 30.4
SIN3B-201ENST00000248054 KANK4Q5T7N3 995 aaPredicted RBP21.51■■□□□ 1.03
SIN3B-201ENST00000248054 KIF21BO75037 1637 aa21.51■■□□□ 1.03
SIN3B-201ENST00000248054 IGF1RP08069 1367 aa21.49■■□□□ 1.03
SIN3B-201ENST00000248054 PEG3Q9GZU2 1588 aa21.48■■□□□ 1.03
SIN3B-201ENST00000248054 FKBP8Q14318 412 aa21.48■■□□□ 1.03
SIN3B-201ENST00000248054 ERICH3Q5RHP9 1530 aa21.47■■□□□ 1.03
SIN3B-201ENST00000248054 TOP2BQ02880 1626 aa21.45■■□□□ 1.02
SIN3B-201ENST00000248054 FHOD3Q2V2M9 1422 aa21.44■■□□□ 1.02
SIN3B-201ENST00000248054 GAPVD1Q14C86 1478 aa21.44■■□□□ 1.02
SIN3B-201ENST00000248054 CC2D2AQ9P2K1 1620 aa21.44■■□□□ 1.02
SIN3B-201ENST00000248054 SYNJ1O43426 1573 aa21.44■■□□□ 1.02
SIN3B-201ENST00000248054 CHGAP10645 457 aaKnown RBP21.44■■□□□ 1.02
SIN3B-201ENST00000248054 SUPT16HQ9Y5B9 1047 aaKnown RBP21.42■■□□□ 1.02
SIN3B-201ENST00000248054 STAG3Q9UJ98 1225 aa21.41■■□□□ 1.02
SIN3B-201ENST00000248054 NEFMP07197 916 aa21.37■■□□□ 1.01
SIN3B-201ENST00000248054 CCDC18Q5T9S5 1454 aa21.37■■□□□ 1.01
SIN3B-201ENST00000248054 UNC13AQ9UPW8 1703 aa21.36■■□□□ 1.01
SIN3B-201ENST00000248054 KDM2AQ9Y2K7 1162 aa21.35■■□□□ 1.01
SIN3B-201ENST00000248054 RAD54L2Q9Y4B4 1467 aa21.34■■□□□ 1.01
SIN3B-201ENST00000248054 RAB3GAP2Q9H2M9 1393 aa21.3■■□□□ 1
SIN3B-201ENST00000248054 TSHZ2Q9NRE2 1034 aa21.28■■□□□ 1
SIN3B-201ENST00000248054 HNRNPUQ00839 825 aaKnown RBP eCLIP21.28■■□□□ 1
SIN3B-201ENST00000248054 CUX1P39880 1505 aa21.28■■□□□ 1
SIN3B-201ENST00000248054 JPH4Q96JJ6 628 aa21.28■■□□□ 1
SIN3B-201ENST00000248054 SIN3AQ96ST3 1273 aa21.27■■□□□ 1
SIN3B-201ENST00000248054 TMC1Q8TDI8 760 aa21.26■□□□□ 0.99
SIN3B-201ENST00000248054 PRXQ9BXM0 1461 aa21.26■□□□□ 0.99
SIN3B-201ENST00000248054 RSPH4AQ5TD94 716 aa21.24■□□□□ 0.99
SIN3B-201ENST00000248054 ANKRD30AQ9BXX3 1397 aa21.24■□□□□ 0.99
SIN3B-201ENST00000248054 CDCA8Q53HL2 280 aa21.23■□□□□ 0.99
SIN3B-201ENST00000248054 DNMBPQ6XZF7 1577 aa21.23■□□□□ 0.99
SIN3B-201ENST00000248054 TOPBP1Q92547 1522 aa21.23■□□□□ 0.99
SIN3B-201ENST00000248054 MRC2Q9UBG0 1479 aa21.22■□□□□ 0.99
SIN3B-201ENST00000248054 MRS2Q9HD23 443 aa21.22■□□□□ 0.99
SIN3B-201ENST00000248054 GRIN2BQ13224 1484 aa21.22■□□□□ 0.99
SIN3B-201ENST00000248054 KANK1Q14678 1352 aa21.21■□□□□ 0.99
SIN3B-201ENST00000248054 ANP32AP39687 249 aaKnown RBP21.2■□□□□ 0.99
SIN3B-201ENST00000248054 FAM9BQ8IZU0 186 aa21.2■□□□□ 0.98
SIN3B-201ENST00000248054 LAMC3Q9Y6N6 1575 aa21.19■□□□□ 0.98
SIN3B-201ENST00000248054 EFCAB2Q5VUJ9 269 aa21.18■□□□□ 0.98
SIN3B-201ENST00000248054 CANXP27824 592 aaKnown RBP21.17■□□□□ 0.98
SIN3B-201ENST00000248054 EFCAB5A4FU69 1503 aa21.17■□□□□ 0.98
SIN3B-201ENST00000248054 CARD11Q9BXL7 1154 aa21.17■□□□□ 0.98
SIN3B-201ENST00000248054 SLC24A1O60721 1099 aa21.16■□□□□ 0.98
SIN3B-201ENST00000248054 HIRIP3Q9BW71 556 aaPredicted RBP21.16■□□□□ 0.98
SIN3B-201ENST00000248054 IFT140Q96RY7 1462 aa21.16■□□□□ 0.98
SIN3B-201ENST00000248054 NESP48681 1621 aa21.15■□□□□ 0.98
SIN3B-201ENST00000248054 POLA1P09884 1462 aaPredicted RBP21.15■□□□□ 0.98
SIN3B-201ENST00000248054 CASKIN1Q8WXD9 1431 aa21.15■□□□□ 0.98
SIN3B-201ENST00000248054 RGL3Q3MIN7 710 aa21.15■□□□□ 0.98
SIN3B-201ENST00000248054 NBR1Q14596 966 aa21.14■□□□□ 0.97
SIN3B-201ENST00000248054 EIF5BO60841 1220 aaKnown RBP21.13■□□□□ 0.97
SIN3B-201ENST00000248054 ZBTB47Q9UFB7 747 aaPredicted RBP21.12■□□□□ 0.97
SIN3B-201ENST00000248054 WDR43Q15061 677 aaKnown RBP eCLIP21.11■□□□□ 0.97
SIN3B-201ENST00000248054 PTPRGP23470 1445 aa21.1■□□□□ 0.97
SIN3B-201ENST00000248054 MPHOSPH9Q99550 1183 aa21.1■□□□□ 0.97
SIN3B-201ENST00000248054 FYCO1Q9BQS8 1478 aa21.1■□□□□ 0.97
SIN3B-201ENST00000248054 AQRO60306 1485 aaKnown RBP eCLIP21.09■□□□□ 0.973e-7■■■■■ 42
SIN3B-201ENST00000248054 LRRC9Q6ZRR7 1453 aa21.08■□□□□ 0.96
SIN3B-201ENST00000248054 ABCA10Q8WWZ4 1543 aa21.07■□□□□ 0.96
SIN3B-201ENST00000248054 RBM19Q9Y4C8 960 aaKnown RBP21.06■□□□□ 0.96
SIN3B-201ENST00000248054 PKD2Q13563 968 aa21.06■□□□□ 0.96
SIN3B-201ENST00000248054 DHX57Q6P158 1386 aaKnown RBP21.05■□□□□ 0.96
SIN3B-201ENST00000248054 ARAP1Q96P48 1450 aa21.04■□□□□ 0.96
SIN3B-201ENST00000248054 NUP155O75694 1391 aa21.03■□□□□ 0.96
SIN3B-201ENST00000248054 MYOM3Q5VTT5 1437 aa21.02■□□□□ 0.96
SIN3B-201ENST00000248054 BIVM-ERCC5R4GMW8 1640 aa21.02■□□□□ 0.96
SIN3B-201ENST00000248054 PPP1R15AO75807 674 aaPredicted RBP21.01■□□□□ 0.95
SIN3B-201ENST00000248054 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.01■□□□□ 0.95
SIN3B-201ENST00000248054 FGD6Q6ZV73 1430 aa21.01■□□□□ 0.95
SIN3B-201ENST00000248054 DCAF11Q8TEB1 546 aa20.99■□□□□ 0.95
SIN3B-201ENST00000248054 PRKCSHP14314 528 aaPredicted RBP20.98■□□□□ 0.95
SIN3B-201ENST00000248054 KNSTRNQ9Y448 316 aa20.98■□□□□ 0.95
SIN3B-201ENST00000248054 CCER2I3L3R5 266 aa20.97■□□□□ 0.95
SIN3B-201ENST00000248054 CUL7Q14999 1698 aa20.97■□□□□ 0.95
SIN3B-201ENST00000248054 RRBP1Q9P2E9 1410 aaKnown RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms