RNA–Protein interactions for RNA: ENST00000247001.9

SUGP1-201, Transcript of SURP and G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUGP1, Length 2,423 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-201ENST00000247001 MAGI1Q96QZ7 1491 aaPredicted RBP19.22■□□□□ 0.67
SUGP1-201ENST00000247001 SYNJ2O15056 1496 aa19.21■□□□□ 0.67
SUGP1-201ENST00000247001 CLIP1P30622 1438 aa19.18■□□□□ 0.66
SUGP1-201ENST00000247001 PPARGC1BQ86YN6 1023 aaKnown RBP19.17■□□□□ 0.66
SUGP1-201ENST00000247001 CUL7Q14999 1698 aa19.15■□□□□ 0.66
SUGP1-201ENST00000247001 FHAD1B1AJZ9 1412 aa19.13■□□□□ 0.65
SUGP1-201ENST00000247001 ADAMTS12P58397 1594 aa19.13■□□□□ 0.65
SUGP1-201ENST00000247001 GRIN2AQ12879 1464 aa19.12■□□□□ 0.65
SUGP1-201ENST00000247001 CYB5RLQ6IPT4 315 aa19.1■□□□□ 0.65
SUGP1-201ENST00000247001 PCGF6Q9BYE7 350 aa19.09■□□□□ 0.65
SUGP1-201ENST00000247001 TTBK1Q5TCY1 1321 aaPredicted RBP19.06■□□□□ 0.64
SUGP1-201ENST00000247001 CEP170Q5SW79 1584 aa19.06■□□□□ 0.64
SUGP1-201ENST00000247001 ARHGEF11O15085 1522 aa19.06■□□□□ 0.64
SUGP1-201ENST00000247001 RIMBP3CA6NJZ7 1639 aa19.04■□□□□ 0.64
SUGP1-201ENST00000247001 RIMBP3BA6NNM3 1639 aa19.04■□□□□ 0.64
SUGP1-201ENST00000247001 RIMBP3Q9UFD9 1639 aa19.04■□□□□ 0.64
SUGP1-201ENST00000247001 CLASP1Q7Z460 1538 aa19.03■□□□□ 0.64
SUGP1-201ENST00000247001 NUP160Q12769 1436 aa19.01■□□□□ 0.63
SUGP1-201ENST00000247001 CTTNBP2Q8WZ74 1663 aa19■□□□□ 0.63
SUGP1-201ENST00000247001 ERCC6L2Q5T890 1561 aa18.99■□□□□ 0.63
SUGP1-201ENST00000247001 JPH4Q96JJ6 628 aa18.98■□□□□ 0.63
SUGP1-201ENST00000247001 ARAP1Q96P48 1450 aa18.97■□□□□ 0.63
SUGP1-201ENST00000247001 VPS8Q8N3P4 1428 aa18.97■□□□□ 0.63
SUGP1-201ENST00000247001 ARHGAP35Q9NRY4 1499 aa18.97■□□□□ 0.63
SUGP1-201ENST00000247001 P3H3Q8IVL6 736 aa18.96■□□□□ 0.63
SUGP1-201ENST00000247001 TRIM26Q12899 539 aaPredicted RBP18.95■□□□□ 0.62
SUGP1-201ENST00000247001 PRG4Q92954 1404 aaPredicted RBP18.89■□□□□ 0.61
SUGP1-201ENST00000247001 APLP2Q06481 763 aa18.89■□□□□ 0.61
SUGP1-201ENST00000247001 FHOD3Q2V2M9 1422 aa18.85■□□□□ 0.61
SUGP1-201ENST00000247001 KIAA0586Q9BVV6 1533 aa18.84■□□□□ 0.61
SUGP1-201ENST00000247001 ATP1B4Q9UN42 357 aaPredicted RBP18.81■□□□□ 0.6
SUGP1-201ENST00000247001 IQGAP2Q13576 1575 aa18.8■□□□□ 0.6
SUGP1-201ENST00000247001 EFCAB5A4FU69 1503 aa18.79■□□□□ 0.6
SUGP1-201ENST00000247001 SHROOM2Q13796 1616 aa18.79■□□□□ 0.6
SUGP1-201ENST00000247001 SAMD9Q5K651 1589 aa18.74■□□□□ 0.59
SUGP1-201ENST00000247001 ZEB1P37275 1124 aaPredicted RBP18.73■□□□□ 0.59
SUGP1-201ENST00000247001 PCF11O94913 1555 aaKnown RBP18.73■□□□□ 0.59
SUGP1-201ENST00000247001 KANK4Q5T7N3 995 aaPredicted RBP18.71■□□□□ 0.59
SUGP1-201ENST00000247001 TRHP20396 242 aaPredicted RBP18.69■□□□□ 0.58
SUGP1-201ENST00000247001 DISP1Q96F81 1524 aa18.68■□□□□ 0.58
SUGP1-201ENST00000247001 FMN1Q68DA7 1419 aa18.66■□□□□ 0.58
SUGP1-201ENST00000247001 PTPRGP23470 1445 aa18.65■□□□□ 0.58
SUGP1-201ENST00000247001 UGGT2Q9NYU1 1516 aa18.64■□□□□ 0.57
SUGP1-201ENST00000247001 ARID3CA6NKF2 412 aa18.64■□□□□ 0.57
SUGP1-201ENST00000247001 TIAM1Q13009 1591 aa18.63■□□□□ 0.57
SUGP1-201ENST00000247001 FYCO1Q9BQS8 1478 aa18.62■□□□□ 0.57
SUGP1-201ENST00000247001 CARMIL2Q6F5E8 1435 aa18.62■□□□□ 0.57
SUGP1-201ENST00000247001 CASKIN1Q8WXD9 1431 aa18.61■□□□□ 0.57
SUGP1-201ENST00000247001 SCAF1Q9H7N4 1312 aaKnown RBP18.61■□□□□ 0.57
SUGP1-201ENST00000247001 KIAA0556O60303 1618 aa18.61■□□□□ 0.57
SUGP1-201ENST00000247001 CFAP43Q8NDM7 1665 aa18.57■□□□□ 0.56
SUGP1-201ENST00000247001 LRRIQ1Q96JM4 1722 aa18.57■□□□□ 0.56
SUGP1-201ENST00000247001 LRRC9Q6ZRR7 1453 aa18.54■□□□□ 0.56
SUGP1-201ENST00000247001 ADCY10Q96PN6 1610 aa18.54■□□□□ 0.56
SUGP1-201ENST00000247001 PLB1Q6P1J6 1458 aa18.53■□□□□ 0.56
SUGP1-201ENST00000247001 MAP3K1Q13233 1512 aa18.52■□□□□ 0.56
SUGP1-201ENST00000247001 NPM1P06748 294 aaKnown RBP eCLIP18.52■□□□□ 0.55
SUGP1-201ENST00000247001 HNRNPUL2Q1KMD3 747 aaKnown RBP18.5■□□□□ 0.55
SUGP1-201ENST00000247001 HECW1Q76N89 1606 aa18.49■□□□□ 0.55
SUGP1-201ENST00000247001 UACAQ9BZF9 1416 aa18.48■□□□□ 0.55
SUGP1-201ENST00000247001 MTUS2Q5JR59 1369 aa18.46■□□□□ 0.55
SUGP1-201ENST00000247001 CDK13Q14004 1512 aaKnown RBP18.45■□□□□ 0.54
SUGP1-201ENST00000247001 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.44■□□□□ 0.54
SUGP1-201ENST00000247001 RAPGEF6Q8TEU7 1601 aa18.44■□□□□ 0.54
SUGP1-201ENST00000247001 FAM69CQ0P6D2 419 aa18.43■□□□□ 0.54
SUGP1-201ENST00000247001 EPRSP07814 1512 aaKnown RBP18.43■□□□□ 0.54
SUGP1-201ENST00000247001 CCDC18Q5T9S5 1454 aa18.42■□□□□ 0.54
SUGP1-201ENST00000247001 PHLDB1Q86UU1 1377 aa18.41■□□□□ 0.54
SUGP1-201ENST00000247001 ITGAEP38570 1179 aa18.4■□□□□ 0.54
SUGP1-201ENST00000247001 KCNH8Q96L42 1107 aa18.4■□□□□ 0.54
SUGP1-201ENST00000247001 ABCC2Q92887 1545 aa18.4■□□□□ 0.54
SUGP1-201ENST00000247001 NUP153P49790 1475 aaKnown RBP18.39■□□□□ 0.53
SUGP1-201ENST00000247001 MAGI3Q5TCQ9 1506 aa18.38■□□□□ 0.53
SUGP1-201ENST00000247001 CCNB3Q8WWL7 1395 aa18.38■□□□□ 0.53
SUGP1-201ENST00000247001 RRBP1Q9P2E9 1410 aaKnown RBP18.37■□□□□ 0.53
SUGP1-201ENST00000247001 ASXL2Q76L83 1435 aa18.36■□□□□ 0.53
SUGP1-201ENST00000247001 FAM50AQ14320 339 aaKnown RBP18.35■□□□□ 0.53
SUGP1-201ENST00000247001 EHBP1L1Q8N3D4 1523 aa18.35■□□□□ 0.53
SUGP1-201ENST00000247001 ABCA8O94911 1581 aa18.34■□□□□ 0.53
SUGP1-201ENST00000247001 UHRF1BP1LA0JNW5 1464 aa18.34■□□□□ 0.53
SUGP1-201ENST00000247001 SUPT6HQ7KZ85 1726 aaKnown RBP18.34■□□□□ 0.53
SUGP1-201ENST00000247001 KDM5BQ9UGL1 1544 aa18.33■□□□□ 0.52
SUGP1-201ENST00000247001 NCOA2Q15596 1464 aa18.32■□□□□ 0.52
SUGP1-201ENST00000247001 ATP10BO94823 1461 aa18.31■□□□□ 0.52
SUGP1-201ENST00000247001 ZCCHC11Q5TAX3 1644 aaKnown RBP18.31■□□□□ 0.52
SUGP1-201ENST00000247001 PRKCSHP14314 528 aaPredicted RBP18.31■□□□□ 0.52
SUGP1-201ENST00000247001 CCER1Q8TC90 406 aaPredicted RBP18.3■□□□□ 0.52
SUGP1-201ENST00000247001 ABCC10Q5T3U5 1492 aa18.29■□□□□ 0.52
SUGP1-201ENST00000247001 MAPKBP1O60336 1514 aa18.29■□□□□ 0.52
SUGP1-201ENST00000247001 KIF13AQ9H1H9 1805 aa18.28■□□□□ 0.52
SUGP1-201ENST00000247001 CDK11AQ9UQ88 783 aaPredicted RBP18.27■□□□□ 0.51
SUGP1-201ENST00000247001 ACIN1Q9UKV3 1341 aaKnown RBP18.25■□□□□ 0.51
SUGP1-201ENST00000247001 DIP2BQ9P265 1576 aa18.25■□□□□ 0.51
SUGP1-201ENST00000247001 TSPOAP1O95153 1857 aa18.24■□□□□ 0.51
SUGP1-201ENST00000247001 FGD6Q6ZV73 1430 aa18.24■□□□□ 0.51
SUGP1-201ENST00000247001 MYOM3Q5VTT5 1437 aa18.23■□□□□ 0.51
SUGP1-201ENST00000247001 WDR7Q9Y4E6 1490 aa18.2■□□□□ 0.5
SUGP1-201ENST00000247001 TROQ12816 1431 aaPredicted RBP18.18■□□□□ 0.5
SUGP1-201ENST00000247001 PLEKHD1A6NEE1 506 aa18.18■□□□□ 0.5
SUGP1-201ENST00000247001 KIF14Q15058 1648 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms