RNA–Protein interactions for RNA: ENST00000218104.5

ABCD1-201, Transcript of ATP binding cassette subfamily D member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD1, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1-201ENST00000218104 JPH4Q96JJ6 628 aa17.77■□□□□ 0.44
ABCD1-201ENST00000218104 POLA1P09884 1462 aaPredicted RBP17.75■□□□□ 0.43
ABCD1-201ENST00000218104 CUX1P39880 1505 aa17.75■□□□□ 0.43
ABCD1-201ENST00000218104 ZNF608Q9ULD9 1512 aaPredicted RBP17.73■□□□□ 0.43
ABCD1-201ENST00000218104 SYNJ1O43426 1573 aa17.73■□□□□ 0.43
ABCD1-201ENST00000218104 URB2Q14146 1524 aaKnown RBP17.73■□□□□ 0.43
ABCD1-201ENST00000218104 GAPVD1Q14C86 1478 aa17.73■□□□□ 0.43
ABCD1-201ENST00000218104 IGF1RP08069 1367 aa17.71■□□□□ 0.43
ABCD1-201ENST00000218104 LAMC3Q9Y6N6 1575 aa17.71■□□□□ 0.43
ABCD1-201ENST00000218104 RAPGEF2Q9Y4G8 1499 aa17.69■□□□□ 0.42
ABCD1-201ENST00000218104 CHIC2Q9UKJ5 165 aa17.62■□□□□ 0.41
ABCD1-201ENST00000218104 BCANQ96GW7 911 aa17.62■□□□□ 0.41
ABCD1-201ENST00000218104 KANK4Q5T7N3 995 aaPredicted RBP17.61■□□□□ 0.41
ABCD1-201ENST00000218104 MYT1Q01538 1121 aa17.6■□□□□ 0.41
ABCD1-201ENST00000218104 CDK11AQ9UQ88 783 aaPredicted RBP17.6■□□□□ 0.41
ABCD1-201ENST00000218104 CNGB1Q14028 1251 aaPredicted RBP17.59■□□□□ 0.41
ABCD1-201ENST00000218104 PLEKHD1A6NEE1 506 aa17.57■□□□□ 0.4
ABCD1-201ENST00000218104 HIRIP3Q9BW71 556 aaPredicted RBP17.56■□□□□ 0.4
ABCD1-201ENST00000218104 SNAPC4Q5SXM2 1469 aa17.54■□□□□ 0.4
ABCD1-201ENST00000218104 FHOD3Q2V2M9 1422 aa17.53■□□□□ 0.4
ABCD1-201ENST00000218104 KIF21AQ7Z4S6 1674 aa17.53■□□□□ 0.4
ABCD1-201ENST00000218104 SENP3Q9H4L4 574 aaPredicted RBP17.53■□□□□ 0.4
ABCD1-201ENST00000218104 IFT140Q96RY7 1462 aa17.53■□□□□ 0.4
ABCD1-201ENST00000218104 MTUS2Q5JR59 1369 aa17.52■□□□□ 0.4
ABCD1-201ENST00000218104 VPS8Q8N3P4 1428 aa17.52■□□□□ 0.4
ABCD1-201ENST00000218104 TRIM52Q96A61 297 aa17.51■□□□□ 0.39
ABCD1-201ENST00000218104 DNMBPQ6XZF7 1577 aa17.51■□□□□ 0.39
ABCD1-201ENST00000218104 GRIN2BQ13224 1484 aa17.5■□□□□ 0.39
ABCD1-201ENST00000218104 NEFLP07196 543 aa17.47■□□□□ 0.39
ABCD1-201ENST00000218104 DDX10Q13206 875 aaKnown RBP17.46■□□□□ 0.39
ABCD1-201ENST00000218104 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.43■□□□□ 0.38
ABCD1-201ENST00000218104 TOP2BQ02880 1626 aa17.43■□□□□ 0.38
ABCD1-201ENST00000218104 POLR3GLQ9BT43 218 aa17.42■□□□□ 0.38
ABCD1-201ENST00000218104 CARMIL2Q6F5E8 1435 aa17.41■□□□□ 0.38
ABCD1-201ENST00000218104 PTPRGP23470 1445 aa17.4■□□□□ 0.38
ABCD1-201ENST00000218104 FHAD1B1AJZ9 1412 aa17.39■□□□□ 0.37
ABCD1-201ENST00000218104 MLECQ14165 292 aa17.37■□□□□ 0.37
ABCD1-201ENST00000218104 RRP7BPQ9NSQ0 103 aa17.37■□□□□ 0.37
ABCD1-201ENST00000218104 CFDP1Q9UEE9 299 aaPredicted RBP17.37■□□□□ 0.37
ABCD1-201ENST00000218104 SIN3AQ96ST3 1273 aa17.36■□□□□ 0.37
ABCD1-201ENST00000218104 PRG4Q92954 1404 aaPredicted RBP17.36■□□□□ 0.37
ABCD1-201ENST00000218104 ARID4BQ4LE39 1312 aaPredicted RBP17.34■□□□□ 0.37
ABCD1-201ENST00000218104 ABCA10Q8WWZ4 1543 aa17.33■□□□□ 0.37
ABCD1-201ENST00000218104 FAM69CQ0P6D2 419 aa17.32■□□□□ 0.36
ABCD1-201ENST00000218104 TSPY4P0CV99 314 aa17.28■□□□□ 0.36
ABCD1-201ENST00000218104 TSPY10P0CW01 314 aa17.28■□□□□ 0.36
ABCD1-201ENST00000218104 KIF21BO75037 1637 aa17.27■□□□□ 0.36
ABCD1-201ENST00000218104 CCNB3Q8WWL7 1395 aa17.27■□□□□ 0.36
ABCD1-201ENST00000218104 ANP32CO43423 234 aa17.27■□□□□ 0.35
ABCD1-201ENST00000218104 ZNF326Q5BKZ1 582 aaKnown RBP17.26■□□□□ 0.35
ABCD1-201ENST00000218104 FKBP8Q14318 412 aa17.26■□□□□ 0.35
ABCD1-201ENST00000218104 ESF1Q9H501 851 aaKnown RBP17.25■□□□□ 0.35
ABCD1-201ENST00000218104 CHGAP10645 457 aaKnown RBP17.24■□□□□ 0.35
ABCD1-201ENST00000218104 ARAP1Q96P48 1450 aa17.24■□□□□ 0.35
ABCD1-201ENST00000218104 PRXQ9BXM0 1461 aa17.22■□□□□ 0.35
ABCD1-201ENST00000218104 HNRNPMP52272 730 aaKnown RBP eCLIP17.2■□□□□ 0.341e-6■■■■□ 20.3
ABCD1-201ENST00000218104 SYNJ2O15056 1496 aa17.2■□□□□ 0.34
ABCD1-201ENST00000218104 GRIN2AQ12879 1464 aa17.19■□□□□ 0.34
ABCD1-201ENST00000218104 WDR62O43379 1518 aa17.19■□□□□ 0.34
ABCD1-201ENST00000218104 DHX57Q6P158 1386 aaKnown RBP17.17■□□□□ 0.34
ABCD1-201ENST00000218104 TONSLQ96HA7 1378 aa17.16■□□□□ 0.34
ABCD1-201ENST00000218104 ERICH6Q7L0X2 663 aa17.16■□□□□ 0.34
ABCD1-201ENST00000218104 ZNF644Q9H582 1327 aaPredicted RBP17.15■□□□□ 0.34
ABCD1-201ENST00000218104 ARHGAP35Q9NRY4 1499 aa17.14■□□□□ 0.33
ABCD1-201ENST00000218104 SUPT16HQ9Y5B9 1047 aaKnown RBP17.14■□□□□ 0.33
ABCD1-201ENST00000218104 GGT6Q6P531 493 aa17.13■□□□□ 0.33
ABCD1-201ENST00000218104 IRX6P78412 446 aaPredicted RBP17.12■□□□□ 0.33
ABCD1-201ENST00000218104 EIF4G3O43432 1585 aaKnown RBP17.12■□□□□ 0.33
ABCD1-201ENST00000218104 FMN1Q68DA7 1419 aa17.12■□□□□ 0.33
ABCD1-201ENST00000218104 RAB3GAP2Q9H2M9 1393 aa17.12■□□□□ 0.33
ABCD1-201ENST00000218104 MAGI1Q96QZ7 1491 aaPredicted RBP17.11■□□□□ 0.33
ABCD1-201ENST00000218104 SENP3-EIF4A1A0A087X0R7 540 aa17.09■□□□□ 0.33
ABCD1-201ENST00000218104 HNRNPUQ00839 825 aaKnown RBP eCLIP17.09■□□□□ 0.33
ABCD1-201ENST00000218104 PRDM2Q13029 1718 aa17.09■□□□□ 0.33
ABCD1-201ENST00000218104 PLB1Q6P1J6 1458 aa17.08■□□□□ 0.33
ABCD1-201ENST00000218104 CLSPNQ9HAW4 1339 aa17.08■□□□□ 0.32
ABCD1-201ENST00000218104 BIVM-ERCC5R4GMW8 1640 aa17.08■□□□□ 0.32
ABCD1-201ENST00000218104 KIAA0586Q9BVV6 1533 aa17.07■□□□□ 0.32
ABCD1-201ENST00000218104 STAG3Q9UJ98 1225 aa17.07■□□□□ 0.32
ABCD1-201ENST00000218104 EFCAB2Q5VUJ9 269 aa17.06■□□□□ 0.32
ABCD1-201ENST00000218104 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
ABCD1-201ENST00000218104 THOC2Q8NI27 1593 aaKnown RBP17.05■□□□□ 0.32
ABCD1-201ENST00000218104 AFAP1Q8N556 730 aa17.04■□□□□ 0.32
ABCD1-201ENST00000218104 RAPGEF3O95398 923 aa17.03■□□□□ 0.32
ABCD1-201ENST00000218104 PHLDB1Q86UU1 1377 aa17.02■□□□□ 0.31
ABCD1-201ENST00000218104 FAM9BQ8IZU0 186 aa17.02■□□□□ 0.31
ABCD1-201ENST00000218104 FOXD1Q16676 465 aa17.01■□□□□ 0.31
ABCD1-201ENST00000218104 RGL3Q3MIN7 710 aa17■□□□□ 0.31
ABCD1-201ENST00000218104 KDM2AQ9Y2K7 1162 aa16.99■□□□□ 0.31
ABCD1-201ENST00000218104 SETD5Q9C0A6 1442 aa16.98■□□□□ 0.31
ABCD1-201ENST00000218104 SLC4A1APQ9BWU0 796 aaKnown RBP16.97■□□□□ 0.31
ABCD1-201ENST00000218104 TARBP1Q13395 1621 aaKnown RBP16.96■□□□□ 0.31
ABCD1-201ENST00000218104 IQGAP2Q13576 1575 aa16.95■□□□□ 0.3
ABCD1-201ENST00000218104 KIF3BO15066 747 aa16.95■□□□□ 0.3
ABCD1-201ENST00000218104 DNAJC5Q9H3Z4 198 aa16.93■□□□□ 0.3
ABCD1-201ENST00000218104 CDK13Q14004 1512 aaKnown RBP16.93■□□□□ 0.3
ABCD1-201ENST00000218104 UACAQ9BZF9 1416 aa16.91■□□□□ 0.3
ABCD1-201ENST00000218104 LRRC9Q6ZRR7 1453 aa16.91■□□□□ 0.3
ABCD1-201ENST00000218104 SPAG9O60271 1321 aaKnown RBP16.9■□□□□ 0.3
ABCD1-201ENST00000218104 PLEKHG5O94827 1062 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms