RNA–Protein interactions for RNA: ENST00000218104.5

ABCD1-201, Transcript of ATP binding cassette subfamily D member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD1, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1-201ENST00000218104 NISCHQ9Y2I1 1504 aa24.39■■□□□ 1.49
ABCD1-201ENST00000218104 DCAF8L2P0C7V8 631 aa23.09■■□□□ 1.29
ABCD1-201ENST00000218104 SHROOM4Q9ULL8 1493 aa21.72■■□□□ 1.07
ABCD1-201ENST00000218104 ABCC9O60706 1549 aa21.59■■□□□ 1.05
ABCD1-201ENST00000218104 SUPT5HO00267 1087 aaKnown RBP21.22■□□□□ 0.99
ABCD1-201ENST00000218104 PABPN1Q86U42 306 aaKnown RBP eCLIP20.95■□□□□ 0.94
ABCD1-201ENST00000218104 CCDC180Q9P1Z9 1646 aa20.52■□□□□ 0.88
ABCD1-201ENST00000218104 ZCCHC6Q5VYS8 1495 aaKnown RBP20.18■□□□□ 0.82
ABCD1-201ENST00000218104 EHMT2Q96KQ7 1210 aa20.18■□□□□ 0.82
ABCD1-201ENST00000218104 SCRIBQ14160 1630 aa20.14■□□□□ 0.81
ABCD1-201ENST00000218104 PCGF6Q9BYE7 350 aa20.07■□□□□ 0.8
ABCD1-201ENST00000218104 RB1CC1Q8TDY2 1594 aa19.91■□□□□ 0.78
ABCD1-201ENST00000218104 CHIC1Q5VXU3 224 aa19.88■□□□□ 0.77
ABCD1-201ENST00000218104 FAM9AQ8IZU1 332 aaPredicted RBP19.84■□□□□ 0.77
ABCD1-201ENST00000218104 LOC105371045A0A1W2PR82 267 aa19.75■□□□□ 0.75
ABCD1-201ENST00000218104 NACADO15069 1562 aa19.75■□□□□ 0.75
ABCD1-201ENST00000218104 PPARGC1BQ86YN6 1023 aaKnown RBP19.56■□□□□ 0.72
ABCD1-201ENST00000218104 HRCP23327 699 aa19.55■□□□□ 0.72
ABCD1-201ENST00000218104 RANGAP1P46060 587 aaPredicted RBP19.54■□□□□ 0.72
ABCD1-201ENST00000218104 TRIM41Q8WV44 630 aa19.54■□□□□ 0.72
ABCD1-201ENST00000218104 CECR2Q9BXF3 1484 aa19.47■□□□□ 0.71
ABCD1-201ENST00000218104 TTBK1Q5TCY1 1321 aaPredicted RBP19.43■□□□□ 0.7
ABCD1-201ENST00000218104 MYO15BQ96JP2 1530 aa19.36■□□□□ 0.69
ABCD1-201ENST00000218104 DCAF1Q9Y4B6 1507 aa19.36■□□□□ 0.69
ABCD1-201ENST00000218104 DNAJC5BQ9UF47 199 aa19.35■□□□□ 0.69
ABCD1-201ENST00000218104 TRIM26Q12899 539 aaPredicted RBP19.18■□□□□ 0.66
ABCD1-201ENST00000218104 RSF1Q96T23 1441 aaPredicted RBP19.16■□□□□ 0.66
ABCD1-201ENST00000218104 MROH2BQ7Z745 1585 aa19.07■□□□□ 0.64
ABCD1-201ENST00000218104 FBLN2P98095 1184 aa19.05■□□□□ 0.64
ABCD1-201ENST00000218104 UBTFP17480 764 aaKnown RBP19.01■□□□□ 0.63
ABCD1-201ENST00000218104 BAZ1BQ9UIG0 1483 aaKnown RBP18.99■□□□□ 0.63
ABCD1-201ENST00000218104 ATP1B4Q9UN42 357 aaPredicted RBP18.99■□□□□ 0.63
ABCD1-201ENST00000218104 CCER1Q8TC90 406 aaPredicted RBP18.94■□□□□ 0.62
ABCD1-201ENST00000218104 BAZ1AQ9NRL2 1556 aaPredicted RBP18.89■□□□□ 0.62
ABCD1-201ENST00000218104 BICRAQ9NZM4 1560 aa18.87■□□□□ 0.61
ABCD1-201ENST00000218104 ZEB1P37275 1124 aaPredicted RBP18.85■□□□□ 0.61
ABCD1-201ENST00000218104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.81■□□□□ 0.6
ABCD1-201ENST00000218104 WIZO95785 1651 aa18.81■□□□□ 0.6
ABCD1-201ENST00000218104 EIF4G1Q04637 1599 aaKnown RBP18.78■□□□□ 0.6
ABCD1-201ENST00000218104 ATAD2BQ9ULI0 1458 aa18.77■□□□□ 0.6
ABCD1-201ENST00000218104 ERCC6Q03468 1493 aa18.74■□□□□ 0.59
ABCD1-201ENST00000218104 UNC13AQ9UPW8 1703 aa18.69■□□□□ 0.58
ABCD1-201ENST00000218104 SMARCA4P51532 1647 aa18.65■□□□□ 0.58
ABCD1-201ENST00000218104 CC2D2AQ9P2K1 1620 aa18.65■□□□□ 0.58
ABCD1-201ENST00000218104 APLP2Q06481 763 aa18.63■□□□□ 0.57
ABCD1-201ENST00000218104 CCDC88BA6NC98 1476 aa18.63■□□□□ 0.57
ABCD1-201ENST00000218104 ARID3CA6NKF2 412 aa18.63■□□□□ 0.57
ABCD1-201ENST00000218104 P3H3Q8IVL6 736 aa18.62■□□□□ 0.57
ABCD1-201ENST00000218104 HNRNPUL2Q1KMD3 747 aaKnown RBP18.61■□□□□ 0.57
ABCD1-201ENST00000218104 SMARCA2P51531 1590 aa18.58■□□□□ 0.56
ABCD1-201ENST00000218104 YTHDC1Q96MU7 727 aaKnown RBP18.55■□□□□ 0.56
ABCD1-201ENST00000218104 NESP48681 1621 aa18.54■□□□□ 0.56
ABCD1-201ENST00000218104 CADPSQ9ULU8 1353 aa18.47■□□□□ 0.55
ABCD1-201ENST00000218104 NCAPD3P42695 1498 aa18.43■□□□□ 0.54
ABCD1-201ENST00000218104 PELP1Q8IZL8 1130 aaKnown RBP18.42■□□□□ 0.54
ABCD1-201ENST00000218104 CHMP7Q8WUX9 453 aaPredicted RBP18.42■□□□□ 0.54
ABCD1-201ENST00000218104 CSRNP3Q8WYN3 585 aa18.42■□□□□ 0.54
ABCD1-201ENST00000218104 TDRD9Q8NDG6 1382 aaKnown RBP18.38■□□□□ 0.53
ABCD1-201ENST00000218104 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
ABCD1-201ENST00000218104 WRNQ14191 1432 aaPredicted RBP eCLIP18.37■□□□□ 0.53
ABCD1-201ENST00000218104 CENPBP07199 599 aaPredicted RBP18.36■□□□□ 0.53
ABCD1-201ENST00000218104 TOP2AP11388 1531 aaKnown RBP18.35■□□□□ 0.53
ABCD1-201ENST00000218104 PDS5BQ9NTI5 1447 aa18.35■□□□□ 0.53
ABCD1-201ENST00000218104 DIEXFQ68CQ4 756 aaKnown RBP18.34■□□□□ 0.53
ABCD1-201ENST00000218104 SCAF1Q9H7N4 1312 aaKnown RBP18.33■□□□□ 0.52
ABCD1-201ENST00000218104 ITGAEP38570 1179 aa18.27■□□□□ 0.52
ABCD1-201ENST00000218104 FANCD2Q9BXW9 1451 aa18.25■□□□□ 0.51
ABCD1-201ENST00000218104 SOGA1O94964 1423 aa18.22■□□□□ 0.51
ABCD1-201ENST00000218104 MYT1LQ9UL68 1186 aa18.19■□□□□ 0.5
ABCD1-201ENST00000218104 CEP164Q9UPV0 1460 aa18.17■□□□□ 0.5
ABCD1-201ENST00000218104 CUX2O14529 1486 aa18.14■□□□□ 0.5
ABCD1-201ENST00000218104 GTF3C3Q9Y5Q9 886 aa18.13■□□□□ 0.49
ABCD1-201ENST00000218104 RAD54L2Q9Y4B4 1467 aa18.1■□□□□ 0.49
ABCD1-201ENST00000218104 NEUROD1Q13562 356 aa18.07■□□□□ 0.48
ABCD1-201ENST00000218104 ACIN1Q9UKV3 1341 aaKnown RBP18.04■□□□□ 0.48
ABCD1-201ENST00000218104 CEP162Q5TB80 1403 aa18.04■□□□□ 0.48
ABCD1-201ENST00000218104 AQRO60306 1485 aaKnown RBP eCLIP18.03■□□□□ 0.482e-6■■■■□ 26.5
ABCD1-201ENST00000218104 RUSC2Q8N2Y8 1516 aa18.02■□□□□ 0.48
ABCD1-201ENST00000218104 HMGXB3Q12766 1538 aa18.02■□□□□ 0.48
ABCD1-201ENST00000218104 CFTRP13569 1480 aa18.01■□□□□ 0.47
ABCD1-201ENST00000218104 KIF27Q86VH2 1401 aa18■□□□□ 0.47
ABCD1-201ENST00000218104 ZNF316A6NFI3 1004 aaPredicted RBP17.99■□□□□ 0.47
ABCD1-201ENST00000218104 KCNH8Q96L42 1107 aa17.96■□□□□ 0.47
ABCD1-201ENST00000218104 CARMIL1Q5VZK9 1371 aa17.94■□□□□ 0.46
ABCD1-201ENST00000218104 FGD5Q6ZNL6 1462 aa17.93■□□□□ 0.46
ABCD1-201ENST00000218104 CYB5RLQ6IPT4 315 aa17.92■□□□□ 0.46
ABCD1-201ENST00000218104 ZNF777Q9ULD5 760 aaPredicted RBP17.92■□□□□ 0.46
ABCD1-201ENST00000218104 CLIP1P30622 1438 aa17.9■□□□□ 0.46
ABCD1-201ENST00000218104 NPM1P06748 294 aaKnown RBP eCLIP17.9■□□□□ 0.46
ABCD1-201ENST00000218104 FAM50AQ14320 339 aaKnown RBP17.88■□□□□ 0.45
ABCD1-201ENST00000218104 GOLGA3Q08378 1498 aa17.88■□□□□ 0.45
ABCD1-201ENST00000218104 TNIKQ9UKE5 1360 aa17.87■□□□□ 0.45
ABCD1-201ENST00000218104 TRHP20396 242 aaPredicted RBP17.87■□□□□ 0.45
ABCD1-201ENST00000218104 PLPPR3Q6T4P5 718 aa17.84■□□□□ 0.45
ABCD1-201ENST00000218104 EEA1Q15075 1411 aa17.84■□□□□ 0.45
ABCD1-201ENST00000218104 OSCARQ8IYS5 282 aa17.83■□□□□ 0.45
ABCD1-201ENST00000218104 MIER1Q8N108 512 aa17.82■□□□□ 0.44
ABCD1-201ENST00000218104 MRC2Q9UBG0 1479 aa17.8■□□□□ 0.44
ABCD1-201ENST00000218104 PEG3Q9GZU2 1588 aa17.8■□□□□ 0.44
ABCD1-201ENST00000218104 TOPBP1Q92547 1522 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms