RNA–Protein interactions for RNA: ENST00000170564.6

GPATCH1-201, Transcript of G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-201ENST00000170564 ERCC6Q03468 1493 aa17.36■□□□□ 0.37
GPATCH1-201ENST00000170564 ZEB1P37275 1124 aaPredicted RBP17.33■□□□□ 0.36
GPATCH1-201ENST00000170564 IFT140Q96RY7 1462 aa17.32■□□□□ 0.36
GPATCH1-201ENST00000170564 ADAMTS12P58397 1594 aa17.3■□□□□ 0.36
GPATCH1-201ENST00000170564 EIF4G3O43432 1585 aaKnown RBP17.29■□□□□ 0.36
GPATCH1-201ENST00000170564 KANK4Q5T7N3 995 aaPredicted RBP17.28■□□□□ 0.36
GPATCH1-201ENST00000170564 GRIN2BQ13224 1484 aa17.26■□□□□ 0.35
GPATCH1-201ENST00000170564 FHOD3Q2V2M9 1422 aa17.24■□□□□ 0.35
GPATCH1-201ENST00000170564 P3H3Q8IVL6 736 aa17.24■□□□□ 0.35
GPATCH1-201ENST00000170564 FHAD1B1AJZ9 1412 aa17.24■□□□□ 0.35
GPATCH1-201ENST00000170564 SAMD9Q5K651 1589 aa17.23■□□□□ 0.35
GPATCH1-201ENST00000170564 PCF11O94913 1555 aaKnown RBP17.23■□□□□ 0.35
GPATCH1-201ENST00000170564 EFCAB5A4FU69 1503 aa17.22■□□□□ 0.35
GPATCH1-201ENST00000170564 SNAPC4Q5SXM2 1469 aa17.19■□□□□ 0.34
GPATCH1-201ENST00000170564 TIAM1Q13009 1591 aa17.18■□□□□ 0.34
GPATCH1-201ENST00000170564 APLP2Q06481 763 aa17.17■□□□□ 0.34
GPATCH1-201ENST00000170564 LRRIQ1Q96JM4 1722 aa17.16■□□□□ 0.34
GPATCH1-201ENST00000170564 CFAP43Q8NDM7 1665 aa17.14■□□□□ 0.33
GPATCH1-201ENST00000170564 MAP3K1Q13233 1512 aa17.13■□□□□ 0.33
GPATCH1-201ENST00000170564 IQGAP2Q13576 1575 aa17.13■□□□□ 0.33
GPATCH1-201ENST00000170564 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.12■□□□□ 0.33
GPATCH1-201ENST00000170564 GRIN2AQ12879 1464 aa17.1■□□□□ 0.33
GPATCH1-201ENST00000170564 FYCO1Q9BQS8 1478 aa17.1■□□□□ 0.33
GPATCH1-201ENST00000170564 CASKIN1Q8WXD9 1431 aa17.09■□□□□ 0.33
GPATCH1-201ENST00000170564 LRRC9Q6ZRR7 1453 aa17.09■□□□□ 0.33
GPATCH1-201ENST00000170564 MAGI1Q96QZ7 1491 aaPredicted RBP17.08■□□□□ 0.32
GPATCH1-201ENST00000170564 CEP170Q5SW79 1584 aa17.07■□□□□ 0.32
GPATCH1-201ENST00000170564 RRBP1Q9P2E9 1410 aaKnown RBP17.05■□□□□ 0.32
GPATCH1-201ENST00000170564 FMN1Q68DA7 1419 aa17.04■□□□□ 0.32
GPATCH1-201ENST00000170564 SYNJ2O15056 1496 aa17.04■□□□□ 0.32
GPATCH1-201ENST00000170564 UGGT2Q9NYU1 1516 aa17.04■□□□□ 0.32
GPATCH1-201ENST00000170564 HNRNPUL2Q1KMD3 747 aaKnown RBP17.04■□□□□ 0.32
GPATCH1-201ENST00000170564 DISP1Q96F81 1524 aa17.02■□□□□ 0.32
GPATCH1-201ENST00000170564 KIAA0586Q9BVV6 1533 aa17.02■□□□□ 0.32
GPATCH1-201ENST00000170564 CCER1Q8TC90 406 aaPredicted RBP17.01■□□□□ 0.31
GPATCH1-201ENST00000170564 PHLDB1Q86UU1 1377 aa17.01■□□□□ 0.31
GPATCH1-201ENST00000170564 NEUROD1Q13562 356 aa17.01■□□□□ 0.31
GPATCH1-201ENST00000170564 ACIN1Q9UKV3 1341 aaKnown RBP16.99■□□□□ 0.31
GPATCH1-201ENST00000170564 ATP1B4Q9UN42 357 aaPredicted RBP16.98■□□□□ 0.31
GPATCH1-201ENST00000170564 KIAA0556O60303 1618 aa16.98■□□□□ 0.31
GPATCH1-201ENST00000170564 GTF3C3Q9Y5Q9 886 aa16.98■□□□□ 0.31
GPATCH1-201ENST00000170564 NUP160Q12769 1436 aa16.96■□□□□ 0.31
GPATCH1-201ENST00000170564 MAGI3Q5TCQ9 1506 aa16.96■□□□□ 0.31
GPATCH1-201ENST00000170564 CCNB3Q8WWL7 1395 aa16.95■□□□□ 0.3
GPATCH1-201ENST00000170564 CHMP7Q8WUX9 453 aaPredicted RBP16.95■□□□□ 0.3
GPATCH1-201ENST00000170564 FBLN2P98095 1184 aa16.93■□□□□ 0.3
GPATCH1-201ENST00000170564 CENPBP07199 599 aaPredicted RBP16.91■□□□□ 0.3
GPATCH1-201ENST00000170564 CDK13Q14004 1512 aaKnown RBP16.89■□□□□ 0.29
GPATCH1-201ENST00000170564 CHD1O14646 1710 aa16.89■□□□□ 0.29
GPATCH1-201ENST00000170564 HECW1Q76N89 1606 aa16.88■□□□□ 0.29
GPATCH1-201ENST00000170564 EPRSP07814 1512 aaKnown RBP16.87■□□□□ 0.29
GPATCH1-201ENST00000170564 DIEXFQ68CQ4 756 aaKnown RBP16.86■□□□□ 0.29
GPATCH1-201ENST00000170564 YTHDC1Q96MU7 727 aaKnown RBP16.85■□□□□ 0.29
GPATCH1-201ENST00000170564 ARHGEF11O15085 1522 aa16.84■□□□□ 0.29
GPATCH1-201ENST00000170564 NUP153P49790 1475 aaKnown RBP16.84■□□□□ 0.29
GPATCH1-201ENST00000170564 CCDC18Q5T9S5 1454 aa16.83■□□□□ 0.29
GPATCH1-201ENST00000170564 NCOA2Q15596 1464 aa16.83■□□□□ 0.28
GPATCH1-201ENST00000170564 MTUS2Q5JR59 1369 aa16.83■□□□□ 0.28
GPATCH1-201ENST00000170564 RAPGEF6Q8TEU7 1601 aa16.82■□□□□ 0.28
GPATCH1-201ENST00000170564 EHBP1L1Q8N3D4 1523 aa16.82■□□□□ 0.28
GPATCH1-201ENST00000170564 JPH4Q96JJ6 628 aa16.82■□□□□ 0.28
GPATCH1-201ENST00000170564 ARID3CA6NKF2 412 aa16.81■□□□□ 0.28
GPATCH1-201ENST00000170564 SUPT6HQ7KZ85 1726 aaKnown RBP16.81■□□□□ 0.28
GPATCH1-201ENST00000170564 PLB1Q6P1J6 1458 aa16.81■□□□□ 0.28
GPATCH1-201ENST00000170564 ITGAEP38570 1179 aa16.8■□□□□ 0.28
GPATCH1-201ENST00000170564 FGD6Q6ZV73 1430 aa16.8■□□□□ 0.28
GPATCH1-201ENST00000170564 DHX57Q6P158 1386 aaKnown RBP16.76■□□□□ 0.27
GPATCH1-201ENST00000170564 MYT1Q01538 1121 aa16.75■□□□□ 0.27
GPATCH1-201ENST00000170564 FAM50AQ14320 339 aaKnown RBP16.75■□□□□ 0.27
GPATCH1-201ENST00000170564 PTPRKQ15262 1439 aa16.75■□□□□ 0.27
GPATCH1-201ENST00000170564 MYOM3Q5VTT5 1437 aa16.75■□□□□ 0.27
GPATCH1-201ENST00000170564 SHROOM2Q13796 1616 aa16.74■□□□□ 0.27
GPATCH1-201ENST00000170564 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.73■□□□□ 0.27
GPATCH1-201ENST00000170564 ABCA8O94911 1581 aa16.72■□□□□ 0.27
GPATCH1-201ENST00000170564 ERCC6L2Q5T890 1561 aa16.72■□□□□ 0.27
GPATCH1-201ENST00000170564 CARMIL2Q6F5E8 1435 aa16.71■□□□□ 0.27
GPATCH1-201ENST00000170564 RAB3GAP2Q9H2M9 1393 aa16.71■□□□□ 0.27
GPATCH1-201ENST00000170564 PRG4Q92954 1404 aaPredicted RBP16.71■□□□□ 0.27
GPATCH1-201ENST00000170564 PTPN23Q9H3S7 1636 aa16.71■□□□□ 0.26
GPATCH1-201ENST00000170564 SETD5Q9C0A6 1442 aa16.66■□□□□ 0.26
GPATCH1-201ENST00000170564 TCOF1Q13428 1488 aaKnown RBP16.66■□□□□ 0.26
GPATCH1-201ENST00000170564 CLASP1Q7Z460 1538 aa16.66■□□□□ 0.26
GPATCH1-201ENST00000170564 KIF14Q15058 1648 aa16.66■□□□□ 0.26
GPATCH1-201ENST00000170564 MAPKBP1O60336 1514 aa16.64■□□□□ 0.25
GPATCH1-201ENST00000170564 ATP10BO94823 1461 aa16.63■□□□□ 0.25
GPATCH1-201ENST00000170564 ADCY10Q96PN6 1610 aa16.62■□□□□ 0.25
GPATCH1-201ENST00000170564 TROQ12816 1431 aaPredicted RBP16.6■□□□□ 0.25
GPATCH1-201ENST00000170564 PTPRGP23470 1445 aa16.58■□□□□ 0.25
GPATCH1-201ENST00000170564 MIA2Q96PC5 1412 aa16.58■□□□□ 0.25
GPATCH1-201ENST00000170564 HFM1A2PYH4 1435 aa16.57■□□□□ 0.24
GPATCH1-201ENST00000170564 ZNF644Q9H582 1327 aaPredicted RBP16.57■□□□□ 0.24
GPATCH1-201ENST00000170564 NAIPQ13075 1403 aa16.57■□□□□ 0.24
GPATCH1-201ENST00000170564 CLSPNQ9HAW4 1339 aa16.56■□□□□ 0.24
GPATCH1-201ENST00000170564 KDM6BO15054 1643 aa16.55■□□□□ 0.24
GPATCH1-201ENST00000170564 GPATCH8Q9UKJ3 1502 aaKnown RBP16.54■□□□□ 0.24
GPATCH1-201ENST00000170564 CDC42BPAQ5VT25 1732 aa16.53■□□□□ 0.24
GPATCH1-201ENST00000170564 ABCC10Q5T3U5 1492 aa16.53■□□□□ 0.24
GPATCH1-201ENST00000170564 GCC2Q8IWJ2 1684 aa16.51■□□□□ 0.23
GPATCH1-201ENST00000170564 DNMT1P26358 1616 aaKnown RBP16.51■□□□□ 0.23
GPATCH1-201ENST00000170564 UACAQ9BZF9 1416 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms