RNA–Protein interactions for RNA: ENST00000053867.7

GRN-201, Transcript of granulin precursor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GRN, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-201ENST00000053867 IFT140Q96RY7 1462 aa23.56■■□□□ 1.36
GRN-201ENST00000053867 PBRM1Q86U86 1689 aa23.54■■□□□ 1.36
GRN-201ENST00000053867 CTTNBP2Q8WZ74 1663 aa23.51■■□□□ 1.35
GRN-201ENST00000053867 GRIN2BQ13224 1484 aa23.48■■□□□ 1.35
GRN-201ENST00000053867 FHOD3Q2V2M9 1422 aa23.48■■□□□ 1.35
GRN-201ENST00000053867 FHAD1B1AJZ9 1412 aa23.47■■□□□ 1.35
GRN-201ENST00000053867 ADAMTS12P58397 1594 aa23.45■■□□□ 1.34
GRN-201ENST00000053867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.42■■□□□ 1.34
GRN-201ENST00000053867 EIF4G3O43432 1585 aaKnown RBP23.41■■□□□ 1.34
GRN-201ENST00000053867 EFCAB5A4FU69 1503 aa23.4■■□□□ 1.34
GRN-201ENST00000053867 SNAPC4Q5SXM2 1469 aa23.36■■□□□ 1.33
GRN-201ENST00000053867 PCF11O94913 1555 aaKnown RBP23.36■■□□□ 1.33
GRN-201ENST00000053867 HNRNPUL2Q1KMD3 747 aaKnown RBP23.34■■□□□ 1.33
GRN-201ENST00000053867 SAMD9Q5K651 1589 aa23.34■■□□□ 1.33
GRN-201ENST00000053867 TIAM1Q13009 1591 aa23.32■■□□□ 1.32
GRN-201ENST00000053867 ATP1B4Q9UN42 357 aaPredicted RBP23.31■■□□□ 1.32
GRN-201ENST00000053867 MAP3K1Q13233 1512 aa23.29■■□□□ 1.32
GRN-201ENST00000053867 CASKIN1Q8WXD9 1431 aa23.27■■□□□ 1.32
GRN-201ENST00000053867 IQGAP2Q13576 1575 aa23.25■■□□□ 1.31
GRN-201ENST00000053867 ZEB1P37275 1124 aaPredicted RBP23.25■■□□□ 1.31
GRN-201ENST00000053867 LRRC9Q6ZRR7 1453 aa23.25■■□□□ 1.31
GRN-201ENST00000053867 CCER1Q8TC90 406 aaPredicted RBP23.25■■□□□ 1.31
GRN-201ENST00000053867 GRIN2AQ12879 1464 aa23.24■■□□□ 1.31
GRN-201ENST00000053867 FYCO1Q9BQS8 1478 aa23.24■■□□□ 1.31
GRN-201ENST00000053867 FMN1Q68DA7 1419 aa23.23■■□□□ 1.31
GRN-201ENST00000053867 MAGI1Q96QZ7 1491 aaPredicted RBP23.21■■□□□ 1.31
GRN-201ENST00000053867 RRBP1Q9P2E9 1410 aaKnown RBP23.21■■□□□ 1.31
GRN-201ENST00000053867 CFAP43Q8NDM7 1665 aa23.2■■□□□ 1.3
GRN-201ENST00000053867 CHMP7Q8WUX9 453 aaPredicted RBP23.17■■□□□ 1.3
GRN-201ENST00000053867 KIAA0586Q9BVV6 1533 aa23.17■■□□□ 1.3
GRN-201ENST00000053867 SYNJ2O15056 1496 aa23.17■■□□□ 1.3
GRN-201ENST00000053867 FBLN2P98095 1184 aa23.16■■□□□ 1.3
GRN-201ENST00000053867 PHLDB1Q86UU1 1377 aa23.15■■□□□ 1.3
GRN-201ENST00000053867 UGGT2Q9NYU1 1516 aa23.14■■□□□ 1.3
GRN-201ENST00000053867 LRRIQ1Q96JM4 1722 aa23.14■■□□□ 1.3
GRN-201ENST00000053867 CCNB3Q8WWL7 1395 aa23.13■■□□□ 1.29
GRN-201ENST00000053867 CEP170Q5SW79 1584 aa23.12■■□□□ 1.29
GRN-201ENST00000053867 DISP1Q96F81 1524 aa23.1■■□□□ 1.29
GRN-201ENST00000053867 NUP160Q12769 1436 aa23.05■■□□□ 1.28
GRN-201ENST00000053867 KIAA0556O60303 1618 aa23.03■■□□□ 1.28
GRN-201ENST00000053867 ITGAEP38570 1179 aa23.03■■□□□ 1.28
GRN-201ENST00000053867 MTUS2Q5JR59 1369 aa22.99■■□□□ 1.27
GRN-201ENST00000053867 MAGI3Q5TCQ9 1506 aa22.99■■□□□ 1.27
GRN-201ENST00000053867 ARID3CA6NKF2 412 aa22.98■■□□□ 1.27
GRN-201ENST00000053867 JPH4Q96JJ6 628 aa22.97■■□□□ 1.27
GRN-201ENST00000053867 EPRSP07814 1512 aaKnown RBP22.95■■□□□ 1.26
GRN-201ENST00000053867 CDK13Q14004 1512 aaKnown RBP22.94■■□□□ 1.26
GRN-201ENST00000053867 FAM50AQ14320 339 aaKnown RBP22.94■■□□□ 1.26
GRN-201ENST00000053867 HECW1Q76N89 1606 aa22.93■■□□□ 1.26
GRN-201ENST00000053867 CCDC18Q5T9S5 1454 aa22.91■■□□□ 1.26
GRN-201ENST00000053867 NCOA2Q15596 1464 aa22.9■■□□□ 1.26
GRN-201ENST00000053867 NUP153P49790 1475 aaKnown RBP22.87■■□□□ 1.25
GRN-201ENST00000053867 FGD6Q6ZV73 1430 aa22.87■■□□□ 1.25
GRN-201ENST00000053867 EHBP1L1Q8N3D4 1523 aa22.87■■□□□ 1.25
GRN-201ENST00000053867 PLB1Q6P1J6 1458 aa22.85■■□□□ 1.25
GRN-201ENST00000053867 DHX57Q6P158 1386 aaKnown RBP22.85■■□□□ 1.25
GRN-201ENST00000053867 CHD1O14646 1710 aa22.84■■□□□ 1.25
GRN-201ENST00000053867 ARHGEF11O15085 1522 aa22.84■■□□□ 1.25
GRN-201ENST00000053867 RAPGEF6Q8TEU7 1601 aa22.83■■□□□ 1.25
GRN-201ENST00000053867 SUPT6HQ7KZ85 1726 aaKnown RBP22.82■■□□□ 1.24
GRN-201ENST00000053867 CARMIL2Q6F5E8 1435 aa22.82■■□□□ 1.24
GRN-201ENST00000053867 MYOM3Q5VTT5 1437 aa22.81■■□□□ 1.24
GRN-201ENST00000053867 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.8■■□□□ 1.244e-11■■■■■ 30.2
GRN-201ENST00000053867 RAB3GAP2Q9H2M9 1393 aa22.8■■□□□ 1.24
GRN-201ENST00000053867 PTPRKQ15262 1439 aa22.76■■□□□ 1.23
GRN-201ENST00000053867 PRG4Q92954 1404 aaPredicted RBP22.76■■□□□ 1.23
GRN-201ENST00000053867 SETD5Q9C0A6 1442 aa22.74■■□□□ 1.23
GRN-201ENST00000053867 PTPN23Q9H3S7 1636 aa22.69■■□□□ 1.22
GRN-201ENST00000053867 ABCA8O94911 1581 aa22.68■■□□□ 1.22
GRN-201ENST00000053867 ERCC6L2Q5T890 1561 aa22.65■■□□□ 1.22
GRN-201ENST00000053867 SHROOM2Q13796 1616 aa22.64■■□□□ 1.22
GRN-201ENST00000053867 TCOF1Q13428 1488 aaKnown RBP22.64■■□□□ 1.21
GRN-201ENST00000053867 PTPRGP23470 1445 aa22.64■■□□□ 1.21
GRN-201ENST00000053867 CLSPNQ9HAW4 1339 aa22.64■■□□□ 1.21
GRN-201ENST00000053867 CDK11AQ9UQ88 783 aaPredicted RBP22.63■■□□□ 1.21
GRN-201ENST00000053867 ATP10BO94823 1461 aa22.62■■□□□ 1.21
GRN-201ENST00000053867 TROQ12816 1431 aaPredicted RBP22.62■■□□□ 1.21
GRN-201ENST00000053867 MIA2Q96PC5 1412 aa22.6■■□□□ 1.21
GRN-201ENST00000053867 ZNF644Q9H582 1327 aaPredicted RBP22.59■■□□□ 1.21
GRN-201ENST00000053867 MAPKBP1O60336 1514 aa22.59■■□□□ 1.21
GRN-201ENST00000053867 KIF14Q15058 1648 aa22.57■■□□□ 1.2
GRN-201ENST00000053867 CHIC2Q9UKJ5 165 aa22.57■■□□□ 1.2
GRN-201ENST00000053867 CLASP1Q7Z460 1538 aa22.56■■□□□ 1.2
GRN-201ENST00000053867 HFM1A2PYH4 1435 aa22.56■■□□□ 1.2
GRN-201ENST00000053867 NAIPQ13075 1403 aa22.55■■□□□ 1.2
GRN-201ENST00000053867 RRP7BPQ9NSQ0 103 aa22.52■■□□□ 1.2
GRN-201ENST00000053867 PLEKHD1A6NEE1 506 aa22.51■■□□□ 1.19
GRN-201ENST00000053867 GPATCH8Q9UKJ3 1502 aaKnown RBP22.51■■□□□ 1.19
GRN-201ENST00000053867 UACAQ9BZF9 1416 aa22.5■■□□□ 1.19
GRN-201ENST00000053867 ADCY10Q96PN6 1610 aa22.49■■□□□ 1.19
GRN-201ENST00000053867 SIN3AQ96ST3 1273 aa22.46■■□□□ 1.19
GRN-201ENST00000053867 CFDP1Q9UEE9 299 aaPredicted RBP22.46■■□□□ 1.19
GRN-201ENST00000053867 ABCC5O15440 1437 aa22.45■■□□□ 1.18
GRN-201ENST00000053867 ABCC10Q5T3U5 1492 aa22.45■■□□□ 1.18
GRN-201ENST00000053867 DAPK1P53355 1430 aa22.44■■□□□ 1.18
GRN-201ENST00000053867 KDM6BO15054 1643 aa22.43■■□□□ 1.18
GRN-201ENST00000053867 ZNF316A6NFI3 1004 aaPredicted RBP22.42■■□□□ 1.18
GRN-201ENST00000053867 ZNF777Q9ULD5 760 aaPredicted RBP22.41■■□□□ 1.18
GRN-201ENST00000053867 CAMSAP2Q08AD1 1489 aa22.41■■□□□ 1.18
GRN-201ENST00000053867 DNMT1P26358 1616 aaKnown RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms