RNA–Protein interactions for RNA: ENSMUST00000228044.1

Ldb3-208, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 BASIC

Gene Ldb3, Length 1,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-208ENSMUST00000228044 Pla2r1Q62028 1487 aa23.75■■□□□ 1.39
Ldb3-208ENSMUST00000228044 Cux1P53564 1515 aa23.74■■□□□ 1.39
Ldb3-208ENSMUST00000228044 Ift140E9PY46 1464 aa23.73■■□□□ 1.39
Ldb3-208ENSMUST00000228044 Polr1aO35134 1717 aaKnown RBP23.72■■□□□ 1.39
Ldb3-208ENSMUST00000228044 Grin2aP35436 1464 aa23.71■■□□□ 1.39
Ldb3-208ENSMUST00000228044 Arhgef5E9Q7D5 1581 aa23.7■■□□□ 1.39
Ldb3-208ENSMUST00000228044 Setd1bQ8CFT2 1985 aa23.7■■□□□ 1.38
Ldb3-208ENSMUST00000228044 Pbrm1Q8BSQ9 1634 aaKnown RBP23.69■■□□□ 1.38
Ldb3-208ENSMUST00000228044 Gpatch8A2A6A1 1505 aa23.68■■□□□ 1.38
Ldb3-208ENSMUST00000228044 Lmo7E9PYF4 1699 aaKnown RBP23.65■■□□□ 1.38
Ldb3-208ENSMUST00000228044 EprsQ8CGC7 1512 aaKnown RBP23.63■■□□□ 1.37
Ldb3-208ENSMUST00000228044 Pcf11G3X9Z4 1553 aa23.63■■□□□ 1.37
Ldb3-208ENSMUST00000228044 Fyco1Q8VDC1 1437 aa23.63■■□□□ 1.37
Ldb3-208ENSMUST00000228044 Rpap1Q80TE0 1409 aa23.62■■□□□ 1.37
Ldb3-208ENSMUST00000228044 Nup160Q9Z0W3 1402 aaKnown RBP23.62■■□□□ 1.37
Ldb3-208ENSMUST00000228044 Tiam1Q60610 1591 aa23.57■■□□□ 1.36
Ldb3-208ENSMUST00000228044 Plekhg3Q4VAC9 1341 aa23.56■■□□□ 1.36
Ldb3-208ENSMUST00000228044 Adamts12Q811B3 1600 aa23.56■■□□□ 1.36
Ldb3-208ENSMUST00000228044 Ap3b1Q9Z1T1 1105 aa23.54■■□□□ 1.36
Ldb3-208ENSMUST00000228044 Abca5Q8K448 1642 aa23.52■■□□□ 1.36
Ldb3-208ENSMUST00000228044 WizO88286 1684 aaKnown RBP23.52■■□□□ 1.35
Ldb3-208ENSMUST00000228044 UbtfP25976 765 aaKnown RBP23.5■■□□□ 1.35
Ldb3-208ENSMUST00000228044 Eif4g3Q80XI3 1579 aaKnown RBP23.5■■□□□ 1.35
Ldb3-208ENSMUST00000228044 CadpsQ80TJ1 1355 aa23.49■■□□□ 1.35
Ldb3-208ENSMUST00000228044 Naip1Q9QWK5 1403 aa23.49■■□□□ 1.35
Ldb3-208ENSMUST00000228044 Cc2d2bA0A286YDU8 1405 aa23.48■■□□□ 1.35
Ldb3-208ENSMUST00000228044 Slx4Q6P1D7 1565 aa23.47■■□□□ 1.35
Ldb3-208ENSMUST00000228044 Gm7298A0A0N4SVU1 1476 aa23.46■■□□□ 1.35
Ldb3-208ENSMUST00000228044 Abca16E9PWJ7 1678 aa23.46■■□□□ 1.35
Ldb3-208ENSMUST00000228044 TchhA0A0B4J1F9 1599 aa23.46■■□□□ 1.35
Ldb3-208ENSMUST00000228044 Peg3Q3URU2 1571 aa23.45■■□□□ 1.34
Ldb3-208ENSMUST00000228044 Rusc2Q80U22 1514 aa23.45■■□□□ 1.34
Ldb3-208ENSMUST00000228044 CntlnA2AM05 1397 aa23.44■■□□□ 1.34
Ldb3-208ENSMUST00000228044 Mier1Q5UAK0 511 aa23.43■■□□□ 1.34
Ldb3-208ENSMUST00000228044 BlmO88700 1416 aa23.41■■□□□ 1.34
Ldb3-208ENSMUST00000228044 PxdnQ3UQ28 1475 aa23.41■■□□□ 1.34
Ldb3-208ENSMUST00000228044 Soga1E1U8D0 1418 aa23.39■■□□□ 1.34
Ldb3-208ENSMUST00000228044 Aebp1Q640N1 1128 aa23.39■■□□□ 1.34
Ldb3-208ENSMUST00000228044 Abcc2Q8VI47 1543 aa23.32■■□□□ 1.32
Ldb3-208ENSMUST00000228044 Ncapd3Q6ZQK0 1506 aa23.29■■□□□ 1.32
Ldb3-208ENSMUST00000228044 Gm1043A0A140LJC2 1431 aa23.27■■□□□ 1.32
Ldb3-208ENSMUST00000228044 Shroom2A2ALU4 1481 aa23.19■■□□□ 1.3
Ldb3-208ENSMUST00000228044 Arhgap27A2AB59 869 aa23.19■■□□□ 1.3
Ldb3-208ENSMUST00000228044 Lmod2Q3UHZ5 550 aa23.19■■□□□ 1.3
Ldb3-208ENSMUST00000228044 Kif27Q7M6Z4 1394 aa23.19■■□□□ 1.3
Ldb3-208ENSMUST00000228044 WrnO09053 1401 aa23.18■■□□□ 1.3
Ldb3-208ENSMUST00000228044 Map3k4O08648 1597 aa23.18■■□□□ 1.3
Ldb3-208ENSMUST00000228044 Dnmt1P13864 1620 aaKnown RBP23.15■■□□□ 1.3
Ldb3-208ENSMUST00000228044 NefmP08553 848 aa23.11■■□□□ 1.29
Ldb3-208ENSMUST00000228044 BC005561E9Q5E2 1589 aa23.1■■□□□ 1.29
Ldb3-208ENSMUST00000228044 Rapgef6Q5NCJ1 1609 aa23.1■■□□□ 1.29
Ldb3-208ENSMUST00000228044 Lmtk2Q3TYD6 1471 aa23.08■■□□□ 1.28
Ldb3-208ENSMUST00000228044 Fgd6Q69ZL1 1399 aa23.05■■□□□ 1.28
Ldb3-208ENSMUST00000228044 3425401B19RikD3Z1D3 1412 aa23.04■■□□□ 1.28
Ldb3-208ENSMUST00000228044 Zcchc11B2RX14 1644 aaKnown RBP23.03■■□□□ 1.28
Ldb3-208ENSMUST00000228044 Gcc2Q8CHG3 1679 aa23.01■■□□□ 1.27
Ldb3-208ENSMUST00000228044 NexmifQ5DTT1 1515 aa23.01■■□□□ 1.27
Ldb3-208ENSMUST00000228044 Neo1P97798 1493 aa23■■□□□ 1.27
Ldb3-208ENSMUST00000228044 Kdm5bQ80Y84 1544 aa22.99■■□□□ 1.27
Ldb3-208ENSMUST00000228044 Arhgef11Q68FM7 1552 aa22.99■■□□□ 1.27
Ldb3-208ENSMUST00000228044 Mug1P28665 1476 aa22.97■■□□□ 1.27
Ldb3-208ENSMUST00000228044 Ccnb3Q810T2 1396 aa22.97■■□□□ 1.27
Ldb3-208ENSMUST00000228044 Arhgap31A6X8Z5 1425 aa22.96■■□□□ 1.27
Ldb3-208ENSMUST00000228044 Ncoa3O09000 1398 aa22.95■■□□□ 1.26
Ldb3-208ENSMUST00000228044 Arhgef12Q8R4H2 1543 aaKnown RBP22.94■■□□□ 1.26
Ldb3-208ENSMUST00000228044 AknaQ80VW7 1404 aa22.94■■□□□ 1.26
Ldb3-208ENSMUST00000228044 Ccdc141E9Q8Q6 1531 aa22.93■■□□□ 1.26
Ldb3-208ENSMUST00000228044 Rrbp1Q99PL5 1605 aaKnown RBP22.93■■□□□ 1.26
Ldb3-208ENSMUST00000228044 Ncoa2Q61026 1462 aa22.92■■□□□ 1.26
Ldb3-208ENSMUST00000228044 Cdc42bpaQ3UU96 1719 aa22.91■■□□□ 1.26
Ldb3-208ENSMUST00000228044 Mroh2aD3Z750 1679 aa22.9■■□□□ 1.26
Ldb3-208ENSMUST00000228044 Kiaa1551Q5DTW7 1521 aa22.89■■□□□ 1.25
Ldb3-208ENSMUST00000228044 Jph4Q80WT0 628 aa22.88■■□□□ 1.25
Ldb3-208ENSMUST00000228044 A2mQ6GQT1 1474 aa22.87■■□□□ 1.25
Ldb3-208ENSMUST00000228044 Magi1Q6RHR9 1471 aa22.85■■□□□ 1.25
Ldb3-208ENSMUST00000228044 Naip2Q9QUK4 1447 aa22.83■■□□□ 1.25
Ldb3-208ENSMUST00000228044 Chd1P40201 1711 aa22.83■■□□□ 1.25
Ldb3-208ENSMUST00000228044 Gm14025A2AP89 1413 aa22.82■■□□□ 1.24
Ldb3-208ENSMUST00000228044 Abcc1O35379 1528 aa22.82■■□□□ 1.24
Ldb3-208ENSMUST00000228044 Dhx57Q6P5D3 1388 aaKnown RBP22.82■■□□□ 1.24
Ldb3-208ENSMUST00000228044 Fam50aQ9WV03 339 aaKnown RBP22.79■■□□□ 1.24
Ldb3-208ENSMUST00000228044 Mapkbp1Q6NS57 1503 aa22.79■■□□□ 1.24
Ldb3-208ENSMUST00000228044 Mia2Q91ZV0 1396 aa22.79■■□□□ 1.24
Ldb3-208ENSMUST00000228044 Fhad1A6PWD2 1420 aa22.79■■□□□ 1.24
Ldb3-208ENSMUST00000228044 Fam163aQ8CAA5 168 aa22.77■■□□□ 1.24
Ldb3-208ENSMUST00000228044 Prex2Q3LAC4 1598 aa22.77■■□□□ 1.24
Ldb3-208ENSMUST00000228044 Vps8Q0P5W1 1427 aa22.74■■□□□ 1.23
Ldb3-208ENSMUST00000228044 Adcy10Q8C0T9 1614 aa22.74■■□□□ 1.23
Ldb3-208ENSMUST00000228044 Arhgef40Q3UPH7 1517 aa22.74■■□□□ 1.23
Ldb3-208ENSMUST00000228044 Fancd2Q80V62 1450 aa22.71■■□□□ 1.23
Ldb3-208ENSMUST00000228044 Cul7Q8VE73 1689 aa22.7■■□□□ 1.22
Ldb3-208ENSMUST00000228044 UacaQ8CGB3 1411 aa22.68■■□□□ 1.22
Ldb3-208ENSMUST00000228044 Kdm6bQ5NCY0 1641 aa22.68■■□□□ 1.22
Ldb3-208ENSMUST00000228044 Fkbp15Q6P9Q6 1216 aaKnown RBP22.66■■□□□ 1.22
Ldb3-208ENSMUST00000228044 Fam208aQ69ZR9 1610 aaKnown RBP22.65■■□□□ 1.22
Ldb3-208ENSMUST00000228044 Abcc5Q9R1X5 1436 aa22.65■■□□□ 1.22
Ldb3-208ENSMUST00000228044 NhsB1AV60 1647 aa22.64■■□□□ 1.21
Ldb3-208ENSMUST00000228044 Kiaa1210E9Q0C6 1637 aa22.63■■□□□ 1.21
Ldb3-208ENSMUST00000228044 Plekhh2Q8C115 1491 aa22.62■■□□□ 1.21
Ldb3-208ENSMUST00000228044 Mlh3A0A1Y7VMP7 1443 aa22.62■■□□□ 1.21
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms