RNA–Protein interactions for RNA: ENSMUST00000228044.1

Ldb3-208, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 BASIC

Gene Ldb3, Length 1,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-208ENSMUST00000228044 NischQ80TM9 1593 aa31.99■■■□□ 2.71
Ldb3-208ENSMUST00000228044 Gm35339A0A140LHH9 1649 aa31.98■■■□□ 2.71
Ldb3-208ENSMUST00000228044 Abcc9P70170 1546 aa31.09■■■□□ 2.57
Ldb3-208ENSMUST00000228044 Abcc8B2RUS7 1588 aa30.62■■■□□ 2.49
Ldb3-208ENSMUST00000228044 ScribQ80U72 1612 aa28.94■■■□□ 2.22
Ldb3-208ENSMUST00000228044 Rhox8Q6VSS7 320 aa28.63■■■□□ 2.17
Ldb3-208ENSMUST00000228044 Dcaf1Q80TR8 1506 aa28.5■■■□□ 2.15
Ldb3-208ENSMUST00000228044 Kdm5dQ62240 1548 aa28.21■■■□□ 2.11
Ldb3-208ENSMUST00000228044 NacadQ5SWP3 1504 aa28.1■■■□□ 2.09
Ldb3-208ENSMUST00000228044 Rb1cc1Q9ESK9 1588 aa27.99■■■□□ 2.07
Ldb3-208ENSMUST00000228044 Rtl1Q7M732 1744 aa27.86■■■□□ 2.05
Ldb3-208ENSMUST00000228044 Ccdc180J3QNE4 1664 aa27.8■■■□□ 2.04
Ldb3-208ENSMUST00000228044 Baz1aO88379 1555 aa27.66■■■□□ 2.02
Ldb3-208ENSMUST00000228044 Sycp2Q9CUU3 1500 aa27.52■■■□□ 2
Ldb3-208ENSMUST00000228044 Crybg2B7ZCC2 1516 aa27.35■■□□□ 1.97
Ldb3-208ENSMUST00000228044 Zcchc6Q5BLK4 1491 aaKnown RBP27.04■■□□□ 1.92
Ldb3-208ENSMUST00000228044 BicraF8VPZ9 1578 aa27■■□□□ 1.91
Ldb3-208ENSMUST00000228044 Smarca2Q6DIC0 1577 aa26.98■■□□□ 1.91
Ldb3-208ENSMUST00000228044 Ccdc136Q3TVA9 1136 aa26.64■■□□□ 1.85
Ldb3-208ENSMUST00000228044 Cecr2E9Q2Z1 1453 aa26.44■■□□□ 1.82
Ldb3-208ENSMUST00000228044 Trim41Q5NCC3 630 aa26.24■■□□□ 1.79
Ldb3-208ENSMUST00000228044 Brd4Q9ESU6 1400 aaKnown RBP26.23■■□□□ 1.79
Ldb3-208ENSMUST00000228044 Smarca4Q3TKT4 1613 aaKnown RBP26.18■■□□□ 1.78
Ldb3-208ENSMUST00000228044 Synj1Q8CHC4 1574 aa26.11■■□□□ 1.77
Ldb3-208ENSMUST00000228044 CftrP26361 1476 aa26.02■■□□□ 1.76
Ldb3-208ENSMUST00000228044 Cttnbp2B9EJA2 1648 aa25.98■■□□□ 1.75
Ldb3-208ENSMUST00000228044 Pds5bQ4VA53 1446 aaKnown RBP25.94■■□□□ 1.74
Ldb3-208ENSMUST00000228044 Atad2bE9Q166 1460 aaKnown RBP25.93■■□□□ 1.74
Ldb3-208ENSMUST00000228044 Iqgap2Q3UQ44 1575 aa25.89■■□□□ 1.73
Ldb3-208ENSMUST00000228044 HrcG5E8J6 738 aa25.86■■□□□ 1.73
Ldb3-208ENSMUST00000228044 Golga3P55937 1487 aa25.71■■□□□ 1.71
Ldb3-208ENSMUST00000228044 Top2bQ64511 1612 aa25.59■■□□□ 1.69
Ldb3-208ENSMUST00000228044 Esf1Q3V1V3 845 aaKnown RBP25.56■■□□□ 1.68
Ldb3-208ENSMUST00000228044 Cngb1E1AZ71 1325 aa25.56■■□□□ 1.68
Ldb3-208ENSMUST00000228044 Wdr62Q3U3T8 1523 aa25.49■■□□□ 1.67
Ldb3-208ENSMUST00000228044 Frmpd1A2AKB4 1549 aa25.45■■□□□ 1.67
Ldb3-208ENSMUST00000228044 Ercc6F8VPZ5 1481 aa25.43■■□□□ 1.66
Ldb3-208ENSMUST00000228044 Cep164Q5DU05 1446 aa25.41■■□□□ 1.66
Ldb3-208ENSMUST00000228044 Thoc2B1AZI6 1594 aaKnown RBP25.38■■□□□ 1.65
Ldb3-208ENSMUST00000228044 Rsf1E9PWW9 1441 aaKnown RBP25.38■■□□□ 1.65
Ldb3-208ENSMUST00000228044 Ccdc88bQ4QRL3 1481 aa25.33■■□□□ 1.65
Ldb3-208ENSMUST00000228044 Cc2d2aQ8CFW7 1633 aa25.32■■□□□ 1.64
Ldb3-208ENSMUST00000228044 Chic1Q8CBW7 227 aa25.25■■□□□ 1.63
Ldb3-208ENSMUST00000228044 Unc13aQ4KUS2 1712 aa25.23■■□□□ 1.63
Ldb3-208ENSMUST00000228044 Fmn1Q05860 1466 aa25.2■■□□□ 1.62
Ldb3-208ENSMUST00000228044 TnnQ80Z71 1560 aa25.09■■□□□ 1.61
Ldb3-208ENSMUST00000228044 Lamc3Q9R0B6 1581 aa25.02■■□□□ 1.6
Ldb3-208ENSMUST00000228044 Phldb1Q6PDH0 1371 aaKnown RBP25.01■■□□□ 1.59
Ldb3-208ENSMUST00000228044 Fam135aQ6NS59 1506 aa25.01■■□□□ 1.59
Ldb3-208ENSMUST00000228044 Top2aQ01320 1528 aaKnown RBP24.97■■□□□ 1.59
Ldb3-208ENSMUST00000228044 Kif15Q6P9L6 1387 aa24.87■■□□□ 1.57
Ldb3-208ENSMUST00000228044 Gab3Q8BSM5 595 aa24.8■■□□□ 1.56
Ldb3-208ENSMUST00000228044 Ubl4bQ9CQ84 188 aa24.72■■□□□ 1.55
Ldb3-208ENSMUST00000228044 Camsap1A2AHC3 1581 aa24.71■■□□□ 1.55
Ldb3-208ENSMUST00000228044 Baz1bQ9Z277 1479 aa24.66■■□□□ 1.54
Ldb3-208ENSMUST00000228044 Rapgef2Q8CHG7 1496 aa24.65■■□□□ 1.54
Ldb3-208ENSMUST00000228044 Dnajc5bQ9CQ94 199 aa24.64■■□□□ 1.54
Ldb3-208ENSMUST00000228044 Cux2P70298 1426 aa24.61■■□□□ 1.53
Ldb3-208ENSMUST00000228044 Ccdc18Q640L5 1455 aa24.6■■□□□ 1.53
Ldb3-208ENSMUST00000228044 Il27Q8K3I6 234 aa24.49■■□□□ 1.51
Ldb3-208ENSMUST00000228044 Grin2bQ01097 1482 aa24.46■■□□□ 1.51
Ldb3-208ENSMUST00000228044 NrkQ9R0G8 1455 aa24.45■■□□□ 1.5
Ldb3-208ENSMUST00000228044 Cep162Q6ZQ06 1403 aa24.43■■□□□ 1.5
Ldb3-208ENSMUST00000228044 Eif4g1Q6NZJ6 1600 aaKnown RBP24.43■■□□□ 1.5
Ldb3-208ENSMUST00000228044 PtprkP35822 1457 aa24.41■■□□□ 1.5
Ldb3-208ENSMUST00000228044 Mrc2Q64449 1479 aa24.41■■□□□ 1.5
Ldb3-208ENSMUST00000228044 Shroom4Q1W617 1475 aa24.4■■□□□ 1.5
Ldb3-208ENSMUST00000228044 Npm1Q61937 292 aaKnown RBP24.38■■□□□ 1.49
Ldb3-208ENSMUST00000228044 Npm2Q80W85 207 aa24.32■■□□□ 1.48
Ldb3-208ENSMUST00000228044 LrpprcQ6PB66 1392 aaKnown RBP24.32■■□□□ 1.48
Ldb3-208ENSMUST00000228044 Ehmt2Q9Z148 1263 aaKnown RBP24.3■■□□□ 1.48
Ldb3-208ENSMUST00000228044 PogzQ8BZH4 1409 aaKnown RBP24.28■■□□□ 1.48
Ldb3-208ENSMUST00000228044 Arhgap35Q91YM2 1499 aa24.25■■□□□ 1.47
Ldb3-208ENSMUST00000228044 Kif21aQ9QXL2 1672 aa24.24■■□□□ 1.47
Ldb3-208ENSMUST00000228044 Efcab5A0JP43 1406 aa24.21■■□□□ 1.47
Ldb3-208ENSMUST00000228044 Duox2A2AQ99 1517 aa24.2■■□□□ 1.46
Ldb3-208ENSMUST00000228044 Dhx29Q6PGC1 1365 aaKnown RBP24.18■■□□□ 1.46
Ldb3-208ENSMUST00000228044 Map3k1P53349 1493 aa24.17■■□□□ 1.46
Ldb3-208ENSMUST00000228044 Mroh2bQ7M6Y6 1581 aa24.12■■□□□ 1.45
Ldb3-208ENSMUST00000228044 Myt1lP97500 1187 aa24.12■■□□□ 1.45
Ldb3-208ENSMUST00000228044 Crocc2F6XLV1 1638 aa24.11■■□□□ 1.45
Ldb3-208ENSMUST00000228044 Samd9lQ69Z37 1561 aa24.07■■□□□ 1.44
Ldb3-208ENSMUST00000228044 AqrQ8CFQ3 1481 aaKnown RBP24.01■■□□□ 1.43
Ldb3-208ENSMUST00000228044 Zeb1Q64318 1117 aa23.96■■□□□ 1.43
Ldb3-208ENSMUST00000228044 Clip1Q922J3 1391 aa23.95■■□□□ 1.43
Ldb3-208ENSMUST00000228044 SynmQ70IV5 1561 aa23.95■■□□□ 1.42
Ldb3-208ENSMUST00000228044 Acin1Q9JIX8 1338 aaKnown RBP23.94■■□□□ 1.42
Ldb3-208ENSMUST00000228044 Plb1Q3TTY0 1478 aa23.89■■□□□ 1.42
Ldb3-208ENSMUST00000228044 Urb2E9Q7L1 1524 aaKnown RBP23.88■■□□□ 1.41
Ldb3-208ENSMUST00000228044 Carmil1Q6EDY6 1374 aa23.87■■□□□ 1.41
Ldb3-208ENSMUST00000228044 Rad54l2Q99NG0 1466 aa23.85■■□□□ 1.41
Ldb3-208ENSMUST00000228044 Lrriq1Q0P5X1 1673 aa23.85■■□□□ 1.41
Ldb3-208ENSMUST00000228044 Eea1Q8BL66 1411 aa23.84■■□□□ 1.41
Ldb3-208ENSMUST00000228044 Rpgrip1Q9EPQ2 1331 aa23.82■■□□□ 1.4
Ldb3-208ENSMUST00000228044 Ankrd26Q811D2 1581 aa23.81■■□□□ 1.4
Ldb3-208ENSMUST00000228044 Erich3F6QRE9 1637 aa23.81■■□□□ 1.4
Ldb3-208ENSMUST00000228044 Arap1Q4LDD4 1452 aa23.78■■□□□ 1.4
Ldb3-208ENSMUST00000228044 Magi3Q9EQJ9 1476 aa23.77■■□□□ 1.4
Ldb3-208ENSMUST00000228044 Setd5Q5XJV7 1441 aa23.76■■□□□ 1.39
Ldb3-208ENSMUST00000228044 Disp1Q3TDN0 1521 aa23.76■■□□□ 1.39
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms