RNA–Protein interactions for RNA: ENSMUST00000210774.1

Ebf3-208, Transcript of Transcription factor COE3, mousemouse

TSL 1 (best) BASIC

Gene Ebf3, Length 2,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-208ENSMUST00000210774 Npm2Q80W85 207 aa20.85■□□□□ 0.93
Ebf3-208ENSMUST00000210774 Slc24a1Q91WD8 1130 aa20.83■□□□□ 0.92
Ebf3-208ENSMUST00000210774 Ppp4r2Q0VGB7 417 aa20.82■□□□□ 0.92
Ebf3-208ENSMUST00000210774 Plekhg3Q4VAC9 1341 aa20.82■□□□□ 0.92
Ebf3-208ENSMUST00000210774 Plcd4Q8K3R3 807 aa20.78■□□□□ 0.92
Ebf3-208ENSMUST00000210774 Pak3Q61036 559 aa20.74■□□□□ 0.91
Ebf3-208ENSMUST00000210774 Gtf3c3Q3TMP1 882 aa20.72■□□□□ 0.91
Ebf3-208ENSMUST00000210774 Upf2A2AT37 1269 aaKnown RBP20.71■□□□□ 0.91
Ebf3-208ENSMUST00000210774 Fgd1P52734 960 aa20.7■□□□□ 0.9
Ebf3-208ENSMUST00000210774 Stra8P70278 393 aa20.69■□□□□ 0.9
Ebf3-208ENSMUST00000210774 Eif5bQ05D44 1216 aaKnown RBP20.66■□□□□ 0.9
Ebf3-208ENSMUST00000210774 Rpap1Q80TE0 1409 aa20.65■□□□□ 0.9
Ebf3-208ENSMUST00000210774 Wdr43Q6ZQL4 677 aaKnown RBP20.63■□□□□ 0.89
Ebf3-208ENSMUST00000210774 Pknox2Q8BG99 474 aa20.63■□□□□ 0.89
Ebf3-208ENSMUST00000210774 Top2aQ01320 1528 aaKnown RBP20.63■□□□□ 0.89
Ebf3-208ENSMUST00000210774 Ccdc27Q3V036 639 aa20.55■□□□□ 0.88
Ebf3-208ENSMUST00000210774 NclP09405 707 aaKnown RBP20.54■□□□□ 0.88
Ebf3-208ENSMUST00000210774 Irx3P81067 507 aa20.51■□□□□ 0.87
Ebf3-208ENSMUST00000210774 Camsap1A2AHC3 1581 aa20.5■□□□□ 0.87
Ebf3-208ENSMUST00000210774 Rapgef2Q8CHG7 1496 aa20.48■□□□□ 0.87
Ebf3-208ENSMUST00000210774 Slc4a3P16283 1227 aa20.48■□□□□ 0.87
Ebf3-208ENSMUST00000210774 NrdcQ8BHG1 1161 aa20.48■□□□□ 0.87
Ebf3-208ENSMUST00000210774 P3h3Q8CG70 732 aa20.48■□□□□ 0.87
Ebf3-208ENSMUST00000210774 Liat1Q810M6 228 aa20.48■□□□□ 0.87
Ebf3-208ENSMUST00000210774 Ncapd3Q6ZQK0 1506 aa20.47■□□□□ 0.87
Ebf3-208ENSMUST00000210774 Egfem1Q8C088 590 aa20.43■□□□□ 0.86
Ebf3-208ENSMUST00000210774 Mrc2Q64449 1479 aa20.42■□□□□ 0.86
Ebf3-208ENSMUST00000210774 Kif15Q6P9L6 1387 aa20.4■□□□□ 0.86
Ebf3-208ENSMUST00000210774 Clip1Q922J3 1391 aa20.4■□□□□ 0.86
Ebf3-208ENSMUST00000210774 Washc2Q6PGL7 1334 aa20.39■□□□□ 0.85
Ebf3-208ENSMUST00000210774 Cep162Q6ZQ06 1403 aa20.38■□□□□ 0.85
Ebf3-208ENSMUST00000210774 Ccdc18Q640L5 1455 aa20.38■□□□□ 0.85
Ebf3-208ENSMUST00000210774 Hsp90aa1P07901 733 aaKnown RBP20.36■□□□□ 0.85
Ebf3-208ENSMUST00000210774 4933416C03RikQ3V063 378 aa20.35■□□□□ 0.85
Ebf3-208ENSMUST00000210774 Ccer2J3QPU5 274 aa20.35■□□□□ 0.85
Ebf3-208ENSMUST00000210774 Sin3aQ60520 1274 aaKnown RBP20.34■□□□□ 0.85
Ebf3-208ENSMUST00000210774 NrkQ9R0G8 1455 aa20.34■□□□□ 0.85
Ebf3-208ENSMUST00000210774 Cux2P70298 1426 aa20.31■□□□□ 0.84
Ebf3-208ENSMUST00000210774 Ubl4bQ9CQ84 188 aa20.28■□□□□ 0.84
Ebf3-208ENSMUST00000210774 Eif4g1Q6NZJ6 1600 aaKnown RBP20.26■□□□□ 0.83
Ebf3-208ENSMUST00000210774 DaxxO35613 739 aa20.25■□□□□ 0.83
Ebf3-208ENSMUST00000210774 Gpatch8A2A6A1 1505 aa20.25■□□□□ 0.83
Ebf3-208ENSMUST00000210774 Grin2bQ01097 1482 aa20.25■□□□□ 0.83
Ebf3-208ENSMUST00000210774 PtprkP35822 1457 aa20.23■□□□□ 0.83
Ebf3-208ENSMUST00000210774 Dnajc5bQ9CQ94 199 aa20.22■□□□□ 0.83
Ebf3-208ENSMUST00000210774 Ipo4Q8VI75 1082 aa20.21■□□□□ 0.83
Ebf3-208ENSMUST00000210774 Ipo9Q91YE6 1041 aa20.21■□□□□ 0.83
Ebf3-208ENSMUST00000210774 Ccdc9Q8VC31 543 aaKnown RBP20.2■□□□□ 0.82
Ebf3-208ENSMUST00000210774 Shroom4Q1W617 1475 aa20.16■□□□□ 0.82
Ebf3-208ENSMUST00000210774 Kif21aQ9QXL2 1672 aa20.15■□□□□ 0.82
Ebf3-208ENSMUST00000210774 Fam50aQ9WV03 339 aaKnown RBP20.15■□□□□ 0.82
Ebf3-208ENSMUST00000210774 PogzQ8BZH4 1409 aaKnown RBP20.14■□□□□ 0.82
Ebf3-208ENSMUST00000210774 Arhgap27A2AB59 869 aa20.14■□□□□ 0.82
Ebf3-208ENSMUST00000210774 Kcnh8P59111 1102 aa20.14■□□□□ 0.81
Ebf3-208ENSMUST00000210774 Efcab5A0JP43 1406 aa20.14■□□□□ 0.81
Ebf3-208ENSMUST00000210774 Hspa5P20029 655 aaKnown RBP20.13■□□□□ 0.81
Ebf3-208ENSMUST00000210774 Lmod2Q3UHZ5 550 aa20.13■□□□□ 0.81
Ebf3-208ENSMUST00000210774 ChgaP26339 463 aaKnown RBP20.12■□□□□ 0.81
Ebf3-208ENSMUST00000210774 LrpprcQ6PB66 1392 aaKnown RBP20.11■□□□□ 0.81
Ebf3-208ENSMUST00000210774 Smg6P61406 1418 aaKnown RBP20.11■□□□□ 0.81
Ebf3-208ENSMUST00000210774 Kdm5bQ80Y84 1544 aa20.11■□□□□ 0.81
Ebf3-208ENSMUST00000210774 Map3k1P53349 1493 aa20.1■□□□□ 0.81
Ebf3-208ENSMUST00000210774 Iqcf3Q9D498 203 aa20.1■□□□□ 0.81
Ebf3-208ENSMUST00000210774 Mrs2Q5NCE8 434 aa20.09■□□□□ 0.81
Ebf3-208ENSMUST00000210774 Gm13697A2AK42 830 aa20.07■□□□□ 0.8
Ebf3-208ENSMUST00000210774 Npm1Q61937 292 aaKnown RBP20.07■□□□□ 0.8
Ebf3-208ENSMUST00000210774 Crocc2F6XLV1 1638 aa20.05■□□□□ 0.8
Ebf3-208ENSMUST00000210774 Pbrm1Q8BSQ9 1634 aaKnown RBP20.04■□□□□ 0.8
Ebf3-208ENSMUST00000210774 Znf692Q3U381 531 aa20.04■□□□□ 0.8
Ebf3-208ENSMUST00000210774 Rtn4Q99P72 1162 aaKnown RBP20.04■□□□□ 0.8
Ebf3-208ENSMUST00000210774 Kcnn1Q9EQR3 537 aa20.04■□□□□ 0.8
Ebf3-208ENSMUST00000210774 AqrQ8CFQ3 1481 aaKnown RBP20.02■□□□□ 0.79
Ebf3-208ENSMUST00000210774 Taok2Q6ZQ29 1240 aa20■□□□□ 0.79
Ebf3-208ENSMUST00000210774 Arhgap35Q91YM2 1499 aa20■□□□□ 0.79
Ebf3-208ENSMUST00000210774 Wwc2Q6NXJ0 1187 aa19.99■□□□□ 0.79
Ebf3-208ENSMUST00000210774 Duox2A2AQ99 1517 aa19.99■□□□□ 0.79
Ebf3-208ENSMUST00000210774 Setd5Q5XJV7 1441 aa19.99■□□□□ 0.79
Ebf3-208ENSMUST00000210774 Zbtb4Q5F293 982 aa19.98■□□□□ 0.79
Ebf3-208ENSMUST00000210774 Slc4a2P13808 1237 aaKnown RBP19.95■□□□□ 0.78
Ebf3-208ENSMUST00000210774 Dhx29Q6PGC1 1365 aaKnown RBP19.95■□□□□ 0.78
Ebf3-208ENSMUST00000210774 Lrriq1Q0P5X1 1673 aa19.94■□□□□ 0.78
Ebf3-208ENSMUST00000210774 Zfp777B9EKF4 885 aa19.93■□□□□ 0.78
Ebf3-208ENSMUST00000210774 Tcerg1Q8CGF7 1100 aaKnown RBP19.92■□□□□ 0.78
Ebf3-208ENSMUST00000210774 Mroh2bQ7M6Y6 1581 aa19.91■□□□□ 0.78
Ebf3-208ENSMUST00000210774 Zbtb7cQ8VCZ7 619 aa19.89■□□□□ 0.77
Ebf3-208ENSMUST00000210774 Samd9lQ69Z37 1561 aa19.88■□□□□ 0.77
Ebf3-208ENSMUST00000210774 Eea1Q8BL66 1411 aa19.87■□□□□ 0.77
Ebf3-208ENSMUST00000210774 Arap1Q4LDD4 1452 aa19.87■□□□□ 0.77
Ebf3-208ENSMUST00000210774 SynmQ70IV5 1561 aa19.87■□□□□ 0.77
Ebf3-208ENSMUST00000210774 Ift140E9PY46 1464 aa19.86■□□□□ 0.77
Ebf3-208ENSMUST00000210774 Exoc6Q8R313 802 aa19.84■□□□□ 0.77
Ebf3-208ENSMUST00000210774 BlmO88700 1416 aa19.83■□□□□ 0.76
Ebf3-208ENSMUST00000210774 Urb2E9Q7L1 1524 aaKnown RBP19.82■□□□□ 0.76
Ebf3-208ENSMUST00000210774 Eif4g3Q80XI3 1579 aaKnown RBP19.82■□□□□ 0.76
Ebf3-208ENSMUST00000210774 AampJ3QN89 436 aa19.82■□□□□ 0.76
Ebf3-208ENSMUST00000210774 UacaQ8CGB3 1411 aa19.82■□□□□ 0.76
Ebf3-208ENSMUST00000210774 Ube2uB1AUC4 352 aa19.81■□□□□ 0.76
Ebf3-208ENSMUST00000210774 Polr1aO35134 1717 aaKnown RBP19.77■□□□□ 0.76
Ebf3-208ENSMUST00000210774 Ofd1Q80Z25 1017 aa19.77■□□□□ 0.75
Ebf3-208ENSMUST00000210774 EprsQ8CGC7 1512 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms