RNA–Protein interactions for RNA: ENSMUST00000210774.1

Ebf3-208, Transcript of Transcription factor COE3, mousemouse

TSL 1 (best) BASIC

Gene Ebf3, Length 2,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-208ENSMUST00000210774 Gm35339A0A140LHH9 1649 aa27.07■■□□□ 1.92
Ebf3-208ENSMUST00000210774 NischQ80TM9 1593 aa26.5■■□□□ 1.83
Ebf3-208ENSMUST00000210774 Abcc9P70170 1546 aa25.9■■□□□ 1.74
Ebf3-208ENSMUST00000210774 Abcc8B2RUS7 1588 aa25.53■■□□□ 1.68
Ebf3-208ENSMUST00000210774 Rpgrip1Q9EPQ2 1331 aa25.26■■□□□ 1.63
Ebf3-208ENSMUST00000210774 Rhox8Q6VSS7 320 aa24.78■■□□□ 1.56
Ebf3-208ENSMUST00000210774 Ehmt2Q9Z148 1263 aaKnown RBP24.61■■□□□ 1.53
Ebf3-208ENSMUST00000210774 Acin1Q9JIX8 1338 aaKnown RBP24.61■■□□□ 1.53
Ebf3-208ENSMUST00000210774 Pcgf6Q99NA9 353 aa24.59■■□□□ 1.53
Ebf3-208ENSMUST00000210774 ScribQ80U72 1612 aa24.17■■□□□ 1.46
Ebf3-208ENSMUST00000210774 Dcaf1Q80TR8 1506 aa24.09■■□□□ 1.45
Ebf3-208ENSMUST00000210774 Ccdc180J3QNE4 1664 aa24.03■■□□□ 1.44
Ebf3-208ENSMUST00000210774 Rtl1Q7M732 1744 aa23.94■■□□□ 1.42
Ebf3-208ENSMUST00000210774 Supt5hO55201 1082 aaKnown RBP23.89■■□□□ 1.41
Ebf3-208ENSMUST00000210774 Neurod1Q60867 357 aa23.85■■□□□ 1.41
Ebf3-208ENSMUST00000210774 NacadQ5SWP3 1504 aa23.54■■□□□ 1.36
Ebf3-208ENSMUST00000210774 Trim41Q5NCC3 630 aa23.49■■□□□ 1.35
Ebf3-208ENSMUST00000210774 Kdm5dQ62240 1548 aa23.47■■□□□ 1.35
Ebf3-208ENSMUST00000210774 Las1lA2BE28 776 aaKnown RBP23.38■■□□□ 1.33
Ebf3-208ENSMUST00000210774 1700123L14RikQ3V2K7 440 aa23.32■■□□□ 1.32
Ebf3-208ENSMUST00000210774 Zeb1Q64318 1117 aa23.19■■□□□ 1.3
Ebf3-208ENSMUST00000210774 Csrnp3P59055 597 aa23.16■■□□□ 1.3
Ebf3-208ENSMUST00000210774 Rb1cc1Q9ESK9 1588 aa23.14■■□□□ 1.3
Ebf3-208ENSMUST00000210774 Zcchc6Q5BLK4 1491 aaKnown RBP23.14■■□□□ 1.29
Ebf3-208ENSMUST00000210774 Crybg2B7ZCC2 1516 aa23.12■■□□□ 1.29
Ebf3-208ENSMUST00000210774 Ccdc136Q3TVA9 1136 aa23.07■■□□□ 1.28
Ebf3-208ENSMUST00000210774 Sycp2Q9CUU3 1500 aa23.04■■□□□ 1.28
Ebf3-208ENSMUST00000210774 CenpbP27790 599 aa23.01■■□□□ 1.27
Ebf3-208ENSMUST00000210774 Baz1aO88379 1555 aa23■■□□□ 1.27
Ebf3-208ENSMUST00000210774 HrcG5E8J6 738 aa22.95■■□□□ 1.27
Ebf3-208ENSMUST00000210774 Cngb1E1AZ71 1325 aa22.95■■□□□ 1.26
Ebf3-208ENSMUST00000210774 Sall2Q9QX96 1004 aa22.84■■□□□ 1.25
Ebf3-208ENSMUST00000210774 Anks4bQ8K3X6 423 aa22.8■■□□□ 1.24
Ebf3-208ENSMUST00000210774 DiexfQ8BTT6 772 aaKnown RBP22.79■■□□□ 1.24
Ebf3-208ENSMUST00000210774 Gm38655A0A286YDK6 273 aa22.77■■□□□ 1.23
Ebf3-208ENSMUST00000210774 Myt1Q8CFC2 1127 aa22.7■■□□□ 1.22
Ebf3-208ENSMUST00000210774 BicraF8VPZ9 1578 aa22.54■■□□□ 1.2
Ebf3-208ENSMUST00000210774 Aplp2Q06335 707 aa22.5■■□□□ 1.19
Ebf3-208ENSMUST00000210774 Bcl11aQ9QYE3 773 aa22.5■■□□□ 1.19
Ebf3-208ENSMUST00000210774 Smarca2Q6DIC0 1577 aa22.44■■□□□ 1.18
Ebf3-208ENSMUST00000210774 Ppargc1bQ8VHJ7 1014 aa22.41■■□□□ 1.18
Ebf3-208ENSMUST00000210774 Wdr66E9Q743 1299 aa22.37■■□□□ 1.17
Ebf3-208ENSMUST00000210774 NefmP08553 848 aa22.35■■□□□ 1.17
Ebf3-208ENSMUST00000210774 Mier1Q5UAK0 511 aa22.34■■□□□ 1.17
Ebf3-208ENSMUST00000210774 Cdk11bP24788 784 aaKnown RBP22.32■■□□□ 1.16
Ebf3-208ENSMUST00000210774 Nop58Q6DFW4 536 aaKnown RBP22.25■■□□□ 1.15
Ebf3-208ENSMUST00000210774 Aebp2Q9Z248 504 aaKnown RBP22.22■■□□□ 1.15
Ebf3-208ENSMUST00000210774 PrkcshO08795 521 aa22.11■■□□□ 1.13
Ebf3-208ENSMUST00000210774 Fam71e1A1L3C1 212 aa22.1■■□□□ 1.13
Ebf3-208ENSMUST00000210774 Gab3Q8BSM5 595 aa22.06■■□□□ 1.12
Ebf3-208ENSMUST00000210774 Mapk8ip2Q9ERE9 830 aa22.05■■□□□ 1.12
Ebf3-208ENSMUST00000210774 Ifnlr1Q8CGK5 535 aa22.03■■□□□ 1.12
Ebf3-208ENSMUST00000210774 SafbD3YXK2 937 aaKnown RBP21.93■■□□□ 1.1
Ebf3-208ENSMUST00000210774 Cep164Q5DU05 1446 aa21.9■■□□□ 1.1
Ebf3-208ENSMUST00000210774 Smarca4Q3TKT4 1613 aaKnown RBP21.85■■□□□ 1.09
Ebf3-208ENSMUST00000210774 ClspnQ80YR7 1315 aa21.85■■□□□ 1.09
Ebf3-208ENSMUST00000210774 Pds5bQ4VA53 1446 aaKnown RBP21.78■■□□□ 1.08
Ebf3-208ENSMUST00000210774 Hnrnpul2Q00PI9 745 aaKnown RBP21.75■■□□□ 1.07
Ebf3-208ENSMUST00000210774 Atad2bE9Q166 1460 aaKnown RBP21.73■■□□□ 1.07
Ebf3-208ENSMUST00000210774 Cecr2E9Q2Z1 1453 aa21.7■■□□□ 1.06
Ebf3-208ENSMUST00000210774 Brd4Q9ESU6 1400 aaKnown RBP21.69■■□□□ 1.06
Ebf3-208ENSMUST00000210774 UbtfP25976 765 aaKnown RBP21.69■■□□□ 1.06
Ebf3-208ENSMUST00000210774 Chic1Q8CBW7 227 aa21.69■■□□□ 1.06
Ebf3-208ENSMUST00000210774 Cttnbp2B9EJA2 1648 aa21.66■■□□□ 1.06
Ebf3-208ENSMUST00000210774 Esf1Q3V1V3 845 aaKnown RBP21.66■■□□□ 1.06
Ebf3-208ENSMUST00000210774 Ap3b1Q9Z1T1 1105 aa21.57■■□□□ 1.04
Ebf3-208ENSMUST00000210774 Iqgap2Q3UQ44 1575 aa21.56■■□□□ 1.04
Ebf3-208ENSMUST00000210774 CftrP26361 1476 aa21.53■■□□□ 1.04
Ebf3-208ENSMUST00000210774 Synj1Q8CHC4 1574 aa21.51■■□□□ 1.03
Ebf3-208ENSMUST00000210774 Thoc2B1AZI6 1594 aaKnown RBP21.46■■□□□ 1.03
Ebf3-208ENSMUST00000210774 Amer1Q7TS75 1132 aa21.44■■□□□ 1.02
Ebf3-208ENSMUST00000210774 Rsf1E9PWW9 1441 aaKnown RBP21.4■■□□□ 1.02
Ebf3-208ENSMUST00000210774 TonslQ6NZL6 1363 aa21.4■■□□□ 1.02
Ebf3-208ENSMUST00000210774 Baz1bQ9Z277 1479 aa21.37■■□□□ 1.01
Ebf3-208ENSMUST00000210774 Wdr62Q3U3T8 1523 aa21.34■■□□□ 1.01
Ebf3-208ENSMUST00000210774 Tnnt3Q9QZ47 272 aa21.32■■□□□ 1
Ebf3-208ENSMUST00000210774 Ttbk1Q6PCN3 1308 aa21.31■■□□□ 1
Ebf3-208ENSMUST00000210774 Ccdc88bQ4QRL3 1481 aa21.3■■□□□ 1
Ebf3-208ENSMUST00000210774 Anp32aO35381 247 aa21.29■■□□□ 1
Ebf3-208ENSMUST00000210774 Top2bQ64511 1612 aa21.26■□□□□ 0.99
Ebf3-208ENSMUST00000210774 Ercc6F8VPZ5 1481 aa21.23■□□□□ 0.99
Ebf3-208ENSMUST00000210774 Nolc1E9Q5C9 702 aaKnown RBP21.21■□□□□ 0.99
Ebf3-208ENSMUST00000210774 Frmpd1A2AKB4 1549 aa21.18■□□□□ 0.98
Ebf3-208ENSMUST00000210774 Hdac5Q9Z2V6 1113 aa21.16■□□□□ 0.98
Ebf3-208ENSMUST00000210774 Fam135aQ6NS59 1506 aa21.14■□□□□ 0.97
Ebf3-208ENSMUST00000210774 Golga3P55937 1487 aa21.13■□□□□ 0.97
Ebf3-208ENSMUST00000210774 Unc13aQ4KUS2 1712 aa21.08■□□□□ 0.97
Ebf3-208ENSMUST00000210774 Myt1lP97500 1187 aa21.06■□□□□ 0.96
Ebf3-208ENSMUST00000210774 Rtl5Q5DTT4 599 aa21■□□□□ 0.95
Ebf3-208ENSMUST00000210774 TnnQ80Z71 1560 aa20.99■□□□□ 0.95
Ebf3-208ENSMUST00000210774 Eid3Q3V124 375 aa20.99■□□□□ 0.95
Ebf3-208ENSMUST00000210774 Supt16hQ920B9 1047 aa20.98■□□□□ 0.95
Ebf3-208ENSMUST00000210774 Znf710Q3U288 666 aa20.97■□□□□ 0.95
Ebf3-208ENSMUST00000210774 Pelp1Q9DBD5 1123 aaKnown RBP20.97■□□□□ 0.95
Ebf3-208ENSMUST00000210774 Calr4Q3TQS0 420 aa20.94■□□□□ 0.94
Ebf3-208ENSMUST00000210774 Il27Q8K3I6 234 aa20.93■□□□□ 0.94
Ebf3-208ENSMUST00000210774 Lamc3Q9R0B6 1581 aa20.92■□□□□ 0.94
Ebf3-208ENSMUST00000210774 Phldb1Q6PDH0 1371 aaKnown RBP20.9■□□□□ 0.94
Ebf3-208ENSMUST00000210774 Cc2d2aQ8CFW7 1633 aa20.89■□□□□ 0.94
Ebf3-208ENSMUST00000210774 Fmn1Q05860 1466 aa20.85■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 89.1 ms