RNA–Protein interactions for RNA: ENSMUST00000169486.8

Ebf3-204, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 4,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-204ENSMUST00000169486 Baz1aO88379 1555 aa23.19■■□□□ 1.3
Ebf3-204ENSMUST00000169486 Gm13697A2AK42 830 aa23.17■■□□□ 1.3
Ebf3-204ENSMUST00000169486 P3h3Q8CG70 732 aa23.17■■□□□ 1.3
Ebf3-204ENSMUST00000169486 Ccdc9Q8VC31 543 aaKnown RBP23.09■■□□□ 1.29
Ebf3-204ENSMUST00000169486 SafbD3YXK2 937 aaKnown RBP23.08■■□□□ 1.28
Ebf3-204ENSMUST00000169486 CanxP35564 591 aaKnown RBP23.07■■□□□ 1.28
Ebf3-204ENSMUST00000169486 Setd5Q5XJV7 1441 aa23.06■■□□□ 1.28
Ebf3-204ENSMUST00000169486 Hdac5Q9Z2V6 1113 aa23.04■■□□□ 1.28
Ebf3-204ENSMUST00000169486 Ofd1Q80Z25 1017 aa23.01■■□□□ 1.27
Ebf3-204ENSMUST00000169486 Kdm5dQ62240 1548 aa22.99■■□□□ 1.27
Ebf3-204ENSMUST00000169486 Rgl3Q3UYI5 709 aa22.95■■□□□ 1.26
Ebf3-204ENSMUST00000169486 Trim30dE9PWL0 497 aa22.94■■□□□ 1.26
Ebf3-204ENSMUST00000169486 Vsig10D3YX43 558 aa22.94■■□□□ 1.26
Ebf3-204ENSMUST00000169486 DekQ7TNV0 380 aaKnown RBP22.94■■□□□ 1.26
Ebf3-204ENSMUST00000169486 Ythdc1E9Q5K9 736 aaKnown RBP22.91■■□□□ 1.26
Ebf3-204ENSMUST00000169486 Ccdc27Q3V036 639 aa22.9■■□□□ 1.26
Ebf3-204ENSMUST00000169486 Bcl11aQ9QYE3 773 aa22.9■■□□□ 1.26
Ebf3-204ENSMUST00000169486 Hsp90ab1P11499 724 aaKnown RBP22.89■■□□□ 1.25
Ebf3-204ENSMUST00000169486 Gm13695A2AK44 830 aa22.87■■□□□ 1.25
Ebf3-204ENSMUST00000169486 Trim26Q99PN3 545 aa22.86■■□□□ 1.25
Ebf3-204ENSMUST00000169486 Golga3P55937 1487 aa22.85■■□□□ 1.25
Ebf3-204ENSMUST00000169486 Lmod3E9QA62 571 aa22.84■■□□□ 1.25
Ebf3-204ENSMUST00000169486 Rsf1E9PWW9 1441 aaKnown RBP22.81■■□□□ 1.24
Ebf3-204ENSMUST00000169486 Trim44Q9QXA7 346 aa22.8■■□□□ 1.24
Ebf3-204ENSMUST00000169486 Clstn2Q9ER65 966 aa22.79■■□□□ 1.24
Ebf3-204ENSMUST00000169486 Kif15Q6P9L6 1387 aa22.77■■□□□ 1.24
Ebf3-204ENSMUST00000169486 Apbb1Q9QXJ1 710 aa22.77■■□□□ 1.23
Ebf3-204ENSMUST00000169486 Grwd1Q810D6 446 aaKnown RBP22.76■■□□□ 1.23
Ebf3-204ENSMUST00000169486 Arid4bA2CG63 1314 aaKnown RBP22.74■■□□□ 1.23
Ebf3-204ENSMUST00000169486 Ercc6F8VPZ5 1481 aa22.73■■□□□ 1.23
Ebf3-204ENSMUST00000169486 Eea1Q8BL66 1411 aa22.73■■□□□ 1.23
Ebf3-204ENSMUST00000169486 CatipB9EKE5 520 aa22.72■■□□□ 1.23
Ebf3-204ENSMUST00000169486 Slc4a3P16283 1227 aa22.71■■□□□ 1.23
Ebf3-204ENSMUST00000169486 Wwc2Q6NXJ0 1187 aa22.66■■□□□ 1.22
Ebf3-204ENSMUST00000169486 Card11Q8CIS0 1159 aa22.66■■□□□ 1.22
Ebf3-204ENSMUST00000169486 Dbr1Q923B1 550 aa22.66■■□□□ 1.22
Ebf3-204ENSMUST00000169486 Hspa5P20029 655 aaKnown RBP22.65■■□□□ 1.22
Ebf3-204ENSMUST00000169486 Fgd1P52734 960 aa22.65■■□□□ 1.22
Ebf3-204ENSMUST00000169486 Htatsf1Q8BGC0 757 aa22.62■■□□□ 1.21
Ebf3-204ENSMUST00000169486 Neurod2Q62414 383 aa22.61■■□□□ 1.21
Ebf3-204ENSMUST00000169486 Plcb2A3KGF7 1181 aa22.61■■□□□ 1.21
Ebf3-204ENSMUST00000169486 Ppm1gQ61074 542 aa22.61■■□□□ 1.21
Ebf3-204ENSMUST00000169486 B4galnt3Q6L8S8 986 aa22.6■■□□□ 1.21
Ebf3-204ENSMUST00000169486 Cwc22Q8C5N3 908 aaKnown RBP22.6■■□□□ 1.21
Ebf3-204ENSMUST00000169486 Kdm2aP59997 1161 aa22.59■■□□□ 1.21
Ebf3-204ENSMUST00000169486 Irx3P81067 507 aa22.59■■□□□ 1.21
Ebf3-204ENSMUST00000169486 Ccdc18Q640L5 1455 aa22.56■■□□□ 1.2
Ebf3-204ENSMUST00000169486 Spryd3E9Q9B3 442 aa22.54■■□□□ 1.2
Ebf3-204ENSMUST00000169486 PtmaP26350 111 aa22.53■■□□□ 1.2
Ebf3-204ENSMUST00000169486 Supt16hQ920B9 1047 aa22.5■■□□□ 1.19
Ebf3-204ENSMUST00000169486 Pds5bQ4VA53 1446 aaKnown RBP22.5■■□□□ 1.19
Ebf3-204ENSMUST00000169486 Tcerg1Q8CGF7 1100 aaKnown RBP22.49■■□□□ 1.19
Ebf3-204ENSMUST00000169486 Plppr3Q7TPB0 716 aa22.49■■□□□ 1.19
Ebf3-204ENSMUST00000169486 Sin3aQ60520 1274 aaKnown RBP22.48■■□□□ 1.19
Ebf3-204ENSMUST00000169486 Armcx1Q9CX83 456 aa22.47■■□□□ 1.19
Ebf3-204ENSMUST00000169486 Mroh3A0A1D5RM54 893 aa22.46■■□□□ 1.19
Ebf3-204ENSMUST00000169486 Sycp2Q9CUU3 1500 aa22.46■■□□□ 1.19
Ebf3-204ENSMUST00000169486 Mia2Q91ZV0 1396 aa22.43■■□□□ 1.18
Ebf3-204ENSMUST00000169486 Ccdc88bQ4QRL3 1481 aa22.42■■□□□ 1.18
Ebf3-204ENSMUST00000169486 Exoc6Q8R313 802 aa22.4■■□□□ 1.18
Ebf3-204ENSMUST00000169486 Gm20521D3Z5F7 333 aa22.35■■□□□ 1.17
Ebf3-204ENSMUST00000169486 Chmp5Q9D7S9 219 aa22.35■■□□□ 1.17
Ebf3-204ENSMUST00000169486 Srpk2O54781 681 aaKnown RBP22.35■■□□□ 1.17
Ebf3-204ENSMUST00000169486 Irx6Q9ER75 438 aa22.35■■□□□ 1.17
Ebf3-204ENSMUST00000169486 Rwdd1Q9CQK7 243 aa22.33■■□□□ 1.17
Ebf3-204ENSMUST00000169486 Crybg2B7ZCC2 1516 aa22.33■■□□□ 1.17
Ebf3-204ENSMUST00000169486 Mtus2Q3UHD3 1353 aa22.32■■□□□ 1.16
Ebf3-204ENSMUST00000169486 Gm6268A2A3U9 297 aa22.31■■□□□ 1.16
Ebf3-204ENSMUST00000169486 Mapk8ip3Q9ESN9 1337 aa22.3■■□□□ 1.16
Ebf3-204ENSMUST00000169486 IqubQ8CDK3 788 aa22.29■■□□□ 1.16
Ebf3-204ENSMUST00000169486 Rrp7aQ9D1C9 280 aaKnown RBP22.29■■□□□ 1.16
Ebf3-204ENSMUST00000169486 Cep162Q6ZQ06 1403 aa22.29■■□□□ 1.16
Ebf3-204ENSMUST00000169486 AU015836B2RUM3 263 aa22.29■■□□□ 1.16
Ebf3-204ENSMUST00000169486 Dnai1Q8C0M8 701 aa22.28■■□□□ 1.16
Ebf3-204ENSMUST00000169486 Exosc9Q9JHI7 438 aaKnown RBP22.28■■□□□ 1.16
Ebf3-204ENSMUST00000169486 Pkd2O35245 966 aa22.28■■□□□ 1.16
Ebf3-204ENSMUST00000169486 Map7O88735 730 aa22.27■■□□□ 1.16
Ebf3-204ENSMUST00000169486 Mbd3Q9Z2D8 285 aaKnown RBP22.27■■□□□ 1.16
Ebf3-204ENSMUST00000169486 Nolc1E9Q5C9 702 aaKnown RBP22.26■■□□□ 1.15
Ebf3-204ENSMUST00000169486 Ipo9Q91YE6 1041 aa22.26■■□□□ 1.15
Ebf3-204ENSMUST00000169486 Arhgap27A2AB59 869 aa22.26■■□□□ 1.15
Ebf3-204ENSMUST00000169486 Dnttip2Q8R2M2 758 aaKnown RBP22.26■■□□□ 1.15
Ebf3-204ENSMUST00000169486 Rundc1Q0VDN7 615 aa22.25■■□□□ 1.15
Ebf3-204ENSMUST00000169486 Cnga1P29974 684 aa22.19■■□□□ 1.14
Ebf3-204ENSMUST00000169486 Zscan21Q07231 555 aa22.18■■□□□ 1.14
Ebf3-204ENSMUST00000169486 EspnQ9ET47 871 aa22.18■■□□□ 1.14
Ebf3-204ENSMUST00000169486 Speer4f1Q9D5Q6 258 aa22.18■■□□□ 1.14
Ebf3-204ENSMUST00000169486 Fmn1Q05860 1466 aa22.16■■□□□ 1.14
Ebf3-204ENSMUST00000169486 Stk24Q99KH8 431 aa22.16■■□□□ 1.14
Ebf3-204ENSMUST00000169486 Casc1Q6TDU8 730 aa22.16■■□□□ 1.14
Ebf3-204ENSMUST00000169486 1700019A02RikA0A087WPV9 146 aa22.15■■□□□ 1.14
Ebf3-204ENSMUST00000169486 ScribQ80U72 1612 aa22.14■■□□□ 1.14
Ebf3-204ENSMUST00000169486 Mak16Q8BGS0 296 aaKnown RBP22.14■■□□□ 1.14
Ebf3-204ENSMUST00000169486 Chmp4bQ9D8B3 224 aaKnown RBP22.12■■□□□ 1.13
Ebf3-204ENSMUST00000169486 KnstrnQ9D9Z1 312 aaKnown RBP22.11■■□□□ 1.13
Ebf3-204ENSMUST00000169486 NudcO35685 332 aaKnown RBP22.11■■□□□ 1.13
Ebf3-204ENSMUST00000169486 Stag3O70576 1240 aa22.11■■□□□ 1.13
Ebf3-204ENSMUST00000169486 Erich6bQ9D4S6 220 aa22.11■■□□□ 1.13
Ebf3-204ENSMUST00000169486 CftrP26361 1476 aa22.1■■□□□ 1.13
Ebf3-204ENSMUST00000169486 Mphosph9A6H5Y1 991 aa22.1■■□□□ 1.13
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms