RNA–Protein interactions for RNA: ENSMUST00000169486.8

Ebf3-204, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 4,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-204ENSMUST00000169486 Rhox8Q6VSS7 320 aa30.56■■■□□ 2.48
Ebf3-204ENSMUST00000169486 Rpgrip1Q9EPQ2 1331 aa28.48■■■□□ 2.15
Ebf3-204ENSMUST00000169486 Ehmt2Q9Z148 1263 aaKnown RBP28.14■■■□□ 2.1
Ebf3-204ENSMUST00000169486 Las1lA2BE28 776 aaKnown RBP27.32■■□□□ 1.96
Ebf3-204ENSMUST00000169486 Ccdc136Q3TVA9 1136 aa27.22■■□□□ 1.95
Ebf3-204ENSMUST00000169486 Cngb1E1AZ71 1325 aa27.1■■□□□ 1.93
Ebf3-204ENSMUST00000169486 Wdr66E9Q743 1299 aa27.07■■□□□ 1.92
Ebf3-204ENSMUST00000169486 Zeb1Q64318 1117 aa27.01■■□□□ 1.91
Ebf3-204ENSMUST00000169486 NischQ80TM9 1593 aa26.97■■□□□ 1.91
Ebf3-204ENSMUST00000169486 Gab3Q8BSM5 595 aa26.75■■□□□ 1.87
Ebf3-204ENSMUST00000169486 Esf1Q3V1V3 845 aaKnown RBP26.6■■□□□ 1.85
Ebf3-204ENSMUST00000169486 Trim41Q5NCC3 630 aa26.58■■□□□ 1.85
Ebf3-204ENSMUST00000169486 Acin1Q9JIX8 1338 aaKnown RBP26.56■■□□□ 1.84
Ebf3-204ENSMUST00000169486 Pelp1Q9DBD5 1123 aaKnown RBP26.38■■□□□ 1.81
Ebf3-204ENSMUST00000169486 Ube2uB1AUC4 352 aa26.31■■□□□ 1.8
Ebf3-204ENSMUST00000169486 Myt1lP97500 1187 aa26.15■■□□□ 1.78
Ebf3-204ENSMUST00000169486 Npm2Q80W85 207 aa26.14■■□□□ 1.78
Ebf3-204ENSMUST00000169486 CenpbP27790 599 aa26.13■■□□□ 1.77
Ebf3-204ENSMUST00000169486 NefmP08553 848 aa26.03■■□□□ 1.76
Ebf3-204ENSMUST00000169486 Pcgf6Q99NA9 353 aa25.93■■□□□ 1.74
Ebf3-204ENSMUST00000169486 UbtfP25976 765 aaKnown RBP25.9■■□□□ 1.74
Ebf3-204ENSMUST00000169486 HrcG5E8J6 738 aa25.66■■□□□ 1.7
Ebf3-204ENSMUST00000169486 Amer1Q7TS75 1132 aa25.61■■□□□ 1.69
Ebf3-204ENSMUST00000169486 Cdk11bP24788 784 aaKnown RBP25.58■■□□□ 1.69
Ebf3-204ENSMUST00000169486 Slc24a1Q91WD8 1130 aa25.57■■□□□ 1.68
Ebf3-204ENSMUST00000169486 Ccdc180J3QNE4 1664 aa25.55■■□□□ 1.68
Ebf3-204ENSMUST00000169486 Stra8P70278 393 aa25.52■■□□□ 1.68
Ebf3-204ENSMUST00000169486 Supt5hO55201 1082 aaKnown RBP25.41■■□□□ 1.66
Ebf3-204ENSMUST00000169486 Nop58Q6DFW4 536 aaKnown RBP25.32■■□□□ 1.64
Ebf3-204ENSMUST00000169486 Ppargc1bQ8VHJ7 1014 aa25.31■■□□□ 1.64
Ebf3-204ENSMUST00000169486 Abcc9P70170 1546 aa25.28■■□□□ 1.64
Ebf3-204ENSMUST00000169486 Myt1Q8CFC2 1127 aa25.17■■□□□ 1.62
Ebf3-204ENSMUST00000169486 Ttbk1Q6PCN3 1308 aa25.15■■□□□ 1.62
Ebf3-204ENSMUST00000169486 Tnnt3Q9QZ47 272 aa25.03■■□□□ 1.6
Ebf3-204ENSMUST00000169486 Rtl1Q7M732 1744 aa25.01■■□□□ 1.59
Ebf3-204ENSMUST00000169486 Il27Q8K3I6 234 aa24.98■■□□□ 1.59
Ebf3-204ENSMUST00000169486 NclP09405 707 aaKnown RBP24.93■■□□□ 1.58
Ebf3-204ENSMUST00000169486 Fam50aQ9WV03 339 aaKnown RBP24.92■■□□□ 1.58
Ebf3-204ENSMUST00000169486 Mier1Q5UAK0 511 aa24.88■■□□□ 1.57
Ebf3-204ENSMUST00000169486 Ap3b1Q9Z1T1 1105 aa24.87■■□□□ 1.57
Ebf3-204ENSMUST00000169486 NrdcQ8BHG1 1161 aa24.86■■□□□ 1.57
Ebf3-204ENSMUST00000169486 Eif5bQ05D44 1216 aaKnown RBP24.84■■□□□ 1.57
Ebf3-204ENSMUST00000169486 TonslQ6NZL6 1363 aa24.83■■□□□ 1.57
Ebf3-204ENSMUST00000169486 Neurod1Q60867 357 aa24.83■■□□□ 1.56
Ebf3-204ENSMUST00000169486 Abcc8B2RUS7 1588 aa24.82■■□□□ 1.56
Ebf3-204ENSMUST00000169486 4933416C03RikQ3V063 378 aa24.8■■□□□ 1.56
Ebf3-204ENSMUST00000169486 Zcchc6Q5BLK4 1491 aaKnown RBP24.78■■□□□ 1.56
Ebf3-204ENSMUST00000169486 Gm35339A0A140LHH9 1649 aa24.68■■□□□ 1.54
Ebf3-204ENSMUST00000169486 Anp32bQ9EST5 272 aaKnown RBP24.59■■□□□ 1.53
Ebf3-204ENSMUST00000169486 NeflP08551 543 aa24.58■■□□□ 1.53
Ebf3-204ENSMUST00000169486 ClspnQ80YR7 1315 aa24.51■■□□□ 1.51
Ebf3-204ENSMUST00000169486 Sall2Q9QX96 1004 aa24.41■■□□□ 1.5
Ebf3-204ENSMUST00000169486 Gm38655A0A286YDK6 273 aa24.4■■□□□ 1.5
Ebf3-204ENSMUST00000169486 Rtl5Q5DTT4 599 aa24.4■■□□□ 1.5
Ebf3-204ENSMUST00000169486 Plekhg3Q4VAC9 1341 aa24.34■■□□□ 1.49
Ebf3-204ENSMUST00000169486 4930567H17RikQ3V0K5 233 aa24.33■■□□□ 1.49
Ebf3-204ENSMUST00000169486 Csrnp3P59055 597 aa24.33■■□□□ 1.48
Ebf3-204ENSMUST00000169486 DiexfQ8BTT6 772 aaKnown RBP24.33■■□□□ 1.48
Ebf3-204ENSMUST00000169486 Anp32aO35381 247 aa24.28■■□□□ 1.48
Ebf3-204ENSMUST00000169486 Mapk8ip2Q9ERE9 830 aa24.27■■□□□ 1.48
Ebf3-204ENSMUST00000169486 Anks4bQ8K3X6 423 aa24.26■■□□□ 1.47
Ebf3-204ENSMUST00000169486 Os9Q8K2C7 672 aa24.22■■□□□ 1.47
Ebf3-204ENSMUST00000169486 Lmod2Q3UHZ5 550 aa24.2■■□□□ 1.46
Ebf3-204ENSMUST00000169486 Eid3Q3V124 375 aa24.16■■□□□ 1.46
Ebf3-204ENSMUST00000169486 Dcaf1Q80TR8 1506 aa24.1■■□□□ 1.45
Ebf3-204ENSMUST00000169486 DaxxO35613 739 aa24.04■■□□□ 1.44
Ebf3-204ENSMUST00000169486 Aplp2Q06335 707 aa24.04■■□□□ 1.44
Ebf3-204ENSMUST00000169486 Chic1Q8CBW7 227 aa23.95■■□□□ 1.42
Ebf3-204ENSMUST00000169486 Zbtb7cQ8VCZ7 619 aa23.95■■□□□ 1.42
Ebf3-204ENSMUST00000169486 Cep164Q5DU05 1446 aa23.87■■□□□ 1.41
Ebf3-204ENSMUST00000169486 Zbtb4Q5F293 982 aa23.85■■□□□ 1.41
Ebf3-204ENSMUST00000169486 Npm1Q61937 292 aaKnown RBP23.81■■□□□ 1.4
Ebf3-204ENSMUST00000169486 Clip1Q922J3 1391 aa23.79■■□□□ 1.4
Ebf3-204ENSMUST00000169486 Calr4Q3TQS0 420 aa23.75■■□□□ 1.39
Ebf3-204ENSMUST00000169486 Hnrnpul2Q00PI9 745 aaKnown RBP23.73■■□□□ 1.39
Ebf3-204ENSMUST00000169486 Ppp4r2Q0VGB7 417 aa23.71■■□□□ 1.39
Ebf3-204ENSMUST00000169486 Brd4Q9ESU6 1400 aaKnown RBP23.71■■□□□ 1.39
Ebf3-204ENSMUST00000169486 1700123L14RikQ3V2K7 440 aa23.7■■□□□ 1.39
Ebf3-204ENSMUST00000169486 Rb1cc1Q9ESK9 1588 aa23.68■■□□□ 1.38
Ebf3-204ENSMUST00000169486 ArxO35085 564 aa23.62■■□□□ 1.37
Ebf3-204ENSMUST00000169486 Prdm10Q3UTQ7 1184 aa23.57■■□□□ 1.36
Ebf3-204ENSMUST00000169486 Aebp2Q9Z248 504 aaKnown RBP23.56■■□□□ 1.36
Ebf3-204ENSMUST00000169486 Nlrp6Q91WS2 869 aa23.53■■□□□ 1.36
Ebf3-204ENSMUST00000169486 NacadQ5SWP3 1504 aa23.53■■□□□ 1.36
Ebf3-204ENSMUST00000169486 Polr3glQ8R0C0 218 aa23.53■■□□□ 1.36
Ebf3-204ENSMUST00000169486 Wdr43Q6ZQL4 677 aaKnown RBP23.52■■□□□ 1.36
Ebf3-204ENSMUST00000169486 Mrs2Q5NCE8 434 aa23.5■■□□□ 1.35
Ebf3-204ENSMUST00000169486 Ccer2J3QPU5 274 aa23.48■■□□□ 1.35
Ebf3-204ENSMUST00000169486 Erich6D3Z6S9 713 aa23.46■■□□□ 1.35
Ebf3-204ENSMUST00000169486 Fam71e1A1L3C1 212 aa23.41■■□□□ 1.34
Ebf3-204ENSMUST00000169486 Rad21Q61550 635 aaKnown RBP23.35■■□□□ 1.33
Ebf3-204ENSMUST00000169486 Chic2Q9D9G3 165 aa23.35■■□□□ 1.33
Ebf3-204ENSMUST00000169486 Ifnlr1Q8CGK5 535 aa23.31■■□□□ 1.32
Ebf3-204ENSMUST00000169486 Upf2A2AT37 1269 aaKnown RBP23.26■■□□□ 1.31
Ebf3-204ENSMUST00000169486 Ubl4bQ9CQ84 188 aa23.26■■□□□ 1.31
Ebf3-204ENSMUST00000169486 Fkbp15Q6P9Q6 1216 aaKnown RBP23.25■■□□□ 1.31
Ebf3-204ENSMUST00000169486 BlmO88700 1416 aa23.24■■□□□ 1.31
Ebf3-204ENSMUST00000169486 Atp1b4Q99ME6 356 aa23.23■■□□□ 1.31
Ebf3-204ENSMUST00000169486 Hsp90aa1P07901 733 aaKnown RBP23.2■■□□□ 1.3
Ebf3-204ENSMUST00000169486 Rangap1P46061 589 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms