RNA–Protein interactions for RNA: ENSMUST00000127430.1

Smchd1-201, Transcript of Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Smchd1, Length 7,052 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1-201ENSMUST00000127430 Pknox2Q8BG99 474 aa13.42□□□□□ -0.26
Smchd1-201ENSMUST00000127430 Ccdc27Q3V036 639 aa13.41□□□□□ -0.26
Smchd1-201ENSMUST00000127430 Ccer2J3QPU5 274 aa13.4□□□□□ -0.26
Smchd1-201ENSMUST00000127430 Rad21Q61550 635 aaKnown RBP13.39□□□□□ -0.27
Smchd1-201ENSMUST00000127430 PtmaP26350 111 aa13.37□□□□□ -0.27
Smchd1-201ENSMUST00000127430 Mrs2Q5NCE8 434 aa13.37□□□□□ -0.27
Smchd1-201ENSMUST00000127430 Cep164Q5DU05 1446 aa13.37□□□□□ -0.27
Smchd1-201ENSMUST00000127430 Q8BT18 775 aa13.37□□□□□ -0.27
Smchd1-201ENSMUST00000127430 P3h3Q8CG70 732 aa13.37□□□□□ -0.27
Smchd1-201ENSMUST00000127430 CanxP35564 591 aaKnown RBP13.36□□□□□ -0.27
Smchd1-201ENSMUST00000127430 Hnrnpul2Q00PI9 745 aaKnown RBP13.34□□□□□ -0.27
Smchd1-201ENSMUST00000127430 Clip1Q922J3 1391 aa13.34□□□□□ -0.27
Smchd1-201ENSMUST00000127430 SafbD3YXK2 937 aaKnown RBP13.32□□□□□ -0.28
Smchd1-201ENSMUST00000127430 Mex3cQ05A36 652 aaKnown RBP13.32□□□□□ -0.28
Smchd1-201ENSMUST00000127430 Trim26Q99PN3 545 aa13.32□□□□□ -0.28
Smchd1-201ENSMUST00000127430 Znf526Q8BI66 675 aa13.31□□□□□ -0.28
Smchd1-201ENSMUST00000127430 Ifnlr1Q8CGK5 535 aa13.3□□□□□ -0.28
Smchd1-201ENSMUST00000127430 Irx3P81067 507 aa13.3□□□□□ -0.28
Smchd1-201ENSMUST00000127430 Abcc9P70170 1546 aa13.29□□□□□ -0.28
Smchd1-201ENSMUST00000127430 Prm3Q62100 101 aa13.26□□□□□ -0.29
Smchd1-201ENSMUST00000127430 Plcb2A3KGF7 1181 aa13.26□□□□□ -0.29
Smchd1-201ENSMUST00000127430 Hsp90ab1P11499 724 aaKnown RBP13.25□□□□□ -0.29
Smchd1-201ENSMUST00000127430 Hdac5Q9Z2V6 1113 aa13.25□□□□□ -0.29
Smchd1-201ENSMUST00000127430 Aebp2Q9Z248 504 aaKnown RBP13.25□□□□□ -0.29
Smchd1-201ENSMUST00000127430 Htatsf1Q8BGC0 757 aa13.24□□□□□ -0.29
Smchd1-201ENSMUST00000127430 Slc4a3P16283 1227 aa13.22□□□□□ -0.29
Smchd1-201ENSMUST00000127430 Mical1Q8VDP3 1048 aa13.22□□□□□ -0.29
Smchd1-201ENSMUST00000127430 Dbr1Q923B1 550 aa13.22□□□□□ -0.29
Smchd1-201ENSMUST00000127430 Trim30dE9PWL0 497 aa13.21□□□□□ -0.29
Smchd1-201ENSMUST00000127430 Erich6D3Z6S9 713 aa13.21□□□□□ -0.29
Smchd1-201ENSMUST00000127430 Erich6bQ9D4S6 220 aa13.19□□□□□ -0.3
Smchd1-201ENSMUST00000127430 Clstn1Q9EPL2 979 aa13.19□□□□□ -0.3
Smchd1-201ENSMUST00000127430 Npm1Q61937 292 aaKnown RBP13.17□□□□□ -0.3
Smchd1-201ENSMUST00000127430 Gpatch11Q3UFS4 262 aa13.16□□□□□ -0.3
Smchd1-201ENSMUST00000127430 Ppm1gQ61074 542 aa13.16□□□□□ -0.3
Smchd1-201ENSMUST00000127430 Dnttip2Q8R2M2 758 aaKnown RBP13.16□□□□□ -0.3
Smchd1-201ENSMUST00000127430 Irx6Q9ER75 438 aa13.16□□□□□ -0.3
Smchd1-201ENSMUST00000127430 Armcx1Q9CX83 456 aa13.15□□□□□ -0.3
Smchd1-201ENSMUST00000127430 Ofd1Q80Z25 1017 aa13.14□□□□□ -0.31
Smchd1-201ENSMUST00000127430 TimelessQ9R1X4 1197 aa13.14□□□□□ -0.31
Smchd1-201ENSMUST00000127430 AU015836B2RUM3 263 aa13.13□□□□□ -0.31
Smchd1-201ENSMUST00000127430 Apbb1Q9QXJ1 710 aa13.12□□□□□ -0.31
Smchd1-201ENSMUST00000127430 Atp1b4Q99ME6 356 aa13.12□□□□□ -0.31
Smchd1-201ENSMUST00000127430 Ecm2Q5FW85 670 aa13.11□□□□□ -0.31
Smchd1-201ENSMUST00000127430 Plcd4Q8K3R3 807 aa13.11□□□□□ -0.31
Smchd1-201ENSMUST00000127430 Mak16Q8BGS0 296 aaKnown RBP13.11□□□□□ -0.31
Smchd1-201ENSMUST00000127430 Arid4aF8VPQ2 1261 aaKnown RBP13.1□□□□□ -0.31
Smchd1-201ENSMUST00000127430 AcrbpQ3V140 540 aa13.1□□□□□ -0.31
Smchd1-201ENSMUST00000127430 Gm13697A2AK42 830 aa13.09□□□□□ -0.31
Smchd1-201ENSMUST00000127430 Brd4Q9ESU6 1400 aaKnown RBP13.07□□□□□ -0.32
Smchd1-201ENSMUST00000127430 BbxQ8VBW5 907 aa13.05□□□□□ -0.32
Smchd1-201ENSMUST00000127430 B4galnt3Q6L8S8 986 aa13.04□□□□□ -0.32
Smchd1-201ENSMUST00000127430 Znf692Q3U381 531 aa13.03□□□□□ -0.32
Smchd1-201ENSMUST00000127430 Chic2Q9D9G3 165 aa13.03□□□□□ -0.32
Smchd1-201ENSMUST00000127430 Ncbp3Q8BZR9 615 aaKnown RBP13.03□□□□□ -0.32
Smchd1-201ENSMUST00000127430 Gm35339A0A140LHH9 1649 aa13.02□□□□□ -0.32
Smchd1-201ENSMUST00000127430 Fgd1P52734 960 aa13.02□□□□□ -0.32
Smchd1-201ENSMUST00000127430 Adam1bQ8R534 806 aa13.01□□□□□ -0.33
Smchd1-201ENSMUST00000127430 Gtf3c3Q3TMP1 882 aa13□□□□□ -0.33
Smchd1-201ENSMUST00000127430 BlmO88700 1416 aa13□□□□□ -0.33
Smchd1-201ENSMUST00000127430 Tcerg1Q8CGF7 1100 aaKnown RBP12.98□□□□□ -0.33
Smchd1-201ENSMUST00000127430 Pcmtd1P59913 357 aa12.97□□□□□ -0.33
Smchd1-201ENSMUST00000127430 Znf771Q8BJ90 317 aa12.97□□□□□ -0.33
Smchd1-201ENSMUST00000127430 Ipo4Q8VI75 1082 aa12.97□□□□□ -0.33
Smchd1-201ENSMUST00000127430 Plppr3Q7TPB0 716 aa12.96□□□□□ -0.33
Smchd1-201ENSMUST00000127430 Slc4a1apE9PX68 744 aa12.95□□□□□ -0.34
Smchd1-201ENSMUST00000127430 Tomm22Q9CPQ3 142 aa12.95□□□□□ -0.34
Smchd1-201ENSMUST00000127430 Supt16hQ920B9 1047 aa12.94□□□□□ -0.34
Smchd1-201ENSMUST00000127430 Clstn2Q9ER65 966 aa12.93□□□□□ -0.34
Smchd1-201ENSMUST00000127430 Gm13695A2AK44 830 aa12.92□□□□□ -0.34
Smchd1-201ENSMUST00000127430 Ipo9Q91YE6 1041 aa12.92□□□□□ -0.34
Smchd1-201ENSMUST00000127430 Fbxo2Q80UW2 297 aa12.92□□□□□ -0.34
Smchd1-201ENSMUST00000127430 Casc1Q6TDU8 730 aa12.92□□□□□ -0.34
Smchd1-201ENSMUST00000127430 Kiaa0754Q69ZZ9 979 aa12.91□□□□□ -0.34
Smchd1-201ENSMUST00000127430 Map7O88735 730 aa12.91□□□□□ -0.34
Smchd1-201ENSMUST00000127430 Mbd3Q9Z2D8 285 aaKnown RBP12.91□□□□□ -0.34
Smchd1-201ENSMUST00000127430 Rgl3Q3UYI5 709 aa12.9□□□□□ -0.35
Smchd1-201ENSMUST00000127430 Dnai1Q8C0M8 701 aa12.89□□□□□ -0.35
Smchd1-201ENSMUST00000127430 Cwc22Q8C5N3 908 aaKnown RBP12.89□□□□□ -0.35
Smchd1-201ENSMUST00000127430 Fam193aQ8CGI1 1231 aaKnown RBP12.88□□□□□ -0.35
Smchd1-201ENSMUST00000127430 MsnP26041 577 aaKnown RBP12.88□□□□□ -0.35
Smchd1-201ENSMUST00000127430 Abcc8B2RUS7 1588 aa12.88□□□□□ -0.35
Smchd1-201ENSMUST00000127430 Rsph6aQ8CDR2 708 aa12.87□□□□□ -0.35
Smchd1-201ENSMUST00000127430 Setd5Q5XJV7 1441 aa12.87□□□□□ -0.35
Smchd1-201ENSMUST00000127430 Rrp12Q6P5B0 1295 aaKnown RBP12.87□□□□□ -0.35
Smchd1-201ENSMUST00000127430 Plcd3Q8K2J0 785 aa12.86□□□□□ -0.35
Smchd1-201ENSMUST00000127430 Fkbp15Q6P9Q6 1216 aaKnown RBP12.86□□□□□ -0.35
Smchd1-201ENSMUST00000127430 Chmp4bQ9D8B3 224 aaKnown RBP12.83□□□□□ -0.36
Smchd1-201ENSMUST00000127430 Neurod2Q62414 383 aa12.82□□□□□ -0.36
Smchd1-201ENSMUST00000127430 Card11Q8CIS0 1159 aa12.81□□□□□ -0.36
Smchd1-201ENSMUST00000127430 Chmp5Q9D7S9 219 aa12.81□□□□□ -0.36
Smchd1-201ENSMUST00000127430 SlkO54988 1233 aa12.81□□□□□ -0.36
Smchd1-201ENSMUST00000127430 Aebp1Q640N1 1128 aa12.81□□□□□ -0.36
Smchd1-201ENSMUST00000127430 Vgll3P85442 326 aa12.8□□□□□ -0.36
Smchd1-201ENSMUST00000127430 Rwdd1Q9CQK7 243 aa12.8□□□□□ -0.36
Smchd1-201ENSMUST00000127430 Tnnt1O88346 262 aa12.79□□□□□ -0.36
Smchd1-201ENSMUST00000127430 KnstrnQ9D9Z1 312 aaKnown RBP12.79□□□□□ -0.36
Smchd1-201ENSMUST00000127430 SetQ9EQU5 289 aaKnown RBP12.79□□□□□ -0.36
Smchd1-201ENSMUST00000127430 Calcoco2A2A6M5 331 aa12.79□□□□□ -0.36
Smchd1-201ENSMUST00000127430 PtmsQ9D0J8 101 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 95.6 ms