RNA–Protein interactions for RNA: ENSMUST00000115274.1

Pdgfrb-202, Transcript of Platelet-derived growth factor receptor beta, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdgfrb, Length 5,423 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfrb-202ENSMUST00000115274 Sycp2Q9CUU3 1500 aa12.74□□□□□ -0.37
Pdgfrb-202ENSMUST00000115274 Hsp90aa1P07901 733 aaKnown RBP12.72□□□□□ -0.37
Pdgfrb-202ENSMUST00000115274 Chic2Q9D9G3 165 aa12.7□□□□□ -0.38
Pdgfrb-202ENSMUST00000115274 PrkcshO08795 521 aa12.7□□□□□ -0.38
Pdgfrb-202ENSMUST00000115274 Clstn2Q9ER65 966 aa12.69□□□□□ -0.38
Pdgfrb-202ENSMUST00000115274 Eea1Q8BL66 1411 aa12.68□□□□□ -0.38
Pdgfrb-202ENSMUST00000115274 Zbtb4Q5F293 982 aa12.68□□□□□ -0.38
Pdgfrb-202ENSMUST00000115274 Aebp2Q9Z248 504 aaKnown RBP12.67□□□□□ -0.38
Pdgfrb-202ENSMUST00000115274 Crybg2B7ZCC2 1516 aa12.67□□□□□ -0.38
Pdgfrb-202ENSMUST00000115274 Pds5bQ4VA53 1446 aaKnown RBP12.67□□□□□ -0.38
Pdgfrb-202ENSMUST00000115274 Atp1b4Q99ME6 356 aa12.67□□□□□ -0.38
Pdgfrb-202ENSMUST00000115274 Nlrp6Q91WS2 869 aa12.67□□□□□ -0.38
Pdgfrb-202ENSMUST00000115274 Upf2A2AT37 1269 aaKnown RBP12.62□□□□□ -0.39
Pdgfrb-202ENSMUST00000115274 ArxO35085 564 aa12.6□□□□□ -0.39
Pdgfrb-202ENSMUST00000115274 Gm13695A2AK44 830 aa12.58□□□□□ -0.4
Pdgfrb-202ENSMUST00000115274 Fmn1Q05860 1466 aa12.57□□□□□ -0.4
Pdgfrb-202ENSMUST00000115274 Mrs2Q5NCE8 434 aa12.57□□□□□ -0.4
Pdgfrb-202ENSMUST00000115274 Pknox2Q8BG99 474 aa12.56□□□□□ -0.4
Pdgfrb-202ENSMUST00000115274 Ccdc27Q3V036 639 aa12.55□□□□□ -0.4
Pdgfrb-202ENSMUST00000115274 Smarca2Q6DIC0 1577 aa12.54□□□□□ -0.4
Pdgfrb-202ENSMUST00000115274 Cecr2E9Q2Z1 1453 aa12.53□□□□□ -0.4
Pdgfrb-202ENSMUST00000115274 Ccdc88bQ4QRL3 1481 aa12.52□□□□□ -0.4
Pdgfrb-202ENSMUST00000115274 Arhgap27A2AB59 869 aa12.52□□□□□ -0.41
Pdgfrb-202ENSMUST00000115274 Prdm10Q3UTQ7 1184 aa12.52□□□□□ -0.41
Pdgfrb-202ENSMUST00000115274 Polr3glQ8R0C0 218 aa12.52□□□□□ -0.41
Pdgfrb-202ENSMUST00000115274 CftrP26361 1476 aa12.48□□□□□ -0.41
Pdgfrb-202ENSMUST00000115274 Cep162Q6ZQ06 1403 aa12.48□□□□□ -0.41
Pdgfrb-202ENSMUST00000115274 CanxP35564 591 aaKnown RBP12.46□□□□□ -0.41
Pdgfrb-202ENSMUST00000115274 CatipB9EKE5 520 aa12.46□□□□□ -0.41
Pdgfrb-202ENSMUST00000115274 Mia2Q91ZV0 1396 aa12.46□□□□□ -0.41
Pdgfrb-202ENSMUST00000115274 SafbD3YXK2 937 aaKnown RBP12.46□□□□□ -0.42
Pdgfrb-202ENSMUST00000115274 Rad21Q61550 635 aaKnown RBP12.45□□□□□ -0.42
Pdgfrb-202ENSMUST00000115274 Rgl3Q3UYI5 709 aa12.44□□□□□ -0.42
Pdgfrb-202ENSMUST00000115274 Synj1Q8CHC4 1574 aa12.44□□□□□ -0.42
Pdgfrb-202ENSMUST00000115274 Plppr3Q7TPB0 716 aa12.43□□□□□ -0.42
Pdgfrb-202ENSMUST00000115274 Mtus2Q3UHD3 1353 aa12.42□□□□□ -0.42
Pdgfrb-202ENSMUST00000115274 Ythdc1E9Q5K9 736 aaKnown RBP12.41□□□□□ -0.42
Pdgfrb-202ENSMUST00000115274 Irx3P81067 507 aa12.4□□□□□ -0.42
Pdgfrb-202ENSMUST00000115274 Trim44Q9QXA7 346 aa12.39□□□□□ -0.43
Pdgfrb-202ENSMUST00000115274 Atad2bE9Q166 1460 aaKnown RBP12.38□□□□□ -0.43
Pdgfrb-202ENSMUST00000115274 Ofd1Q80Z25 1017 aa12.38□□□□□ -0.43
Pdgfrb-202ENSMUST00000115274 Hsp90ab1P11499 724 aaKnown RBP12.37□□□□□ -0.43
Pdgfrb-202ENSMUST00000115274 Cwc22Q8C5N3 908 aaKnown RBP12.37□□□□□ -0.43
Pdgfrb-202ENSMUST00000115274 P3h3Q8CG70 732 aa12.36□□□□□ -0.43
Pdgfrb-202ENSMUST00000115274 DekQ7TNV0 380 aaKnown RBP12.36□□□□□ -0.43
Pdgfrb-202ENSMUST00000115274 Kif27Q7M6Z4 1394 aa12.36□□□□□ -0.43
Pdgfrb-202ENSMUST00000115274 Safb2Q80YR5 991 aaKnown RBP12.36□□□□□ -0.43
Pdgfrb-202ENSMUST00000115274 Phldb1Q6PDH0 1371 aaKnown RBP12.34□□□□□ -0.43
Pdgfrb-202ENSMUST00000115274 Aebp1Q640N1 1128 aa12.34□□□□□ -0.43
Pdgfrb-202ENSMUST00000115274 Rrp7aQ9D1C9 280 aaKnown RBP12.34□□□□□ -0.43
Pdgfrb-202ENSMUST00000115274 Smarca4Q3TKT4 1613 aaKnown RBP12.34□□□□□ -0.43
Pdgfrb-202ENSMUST00000115274 Cux2P70298 1426 aa12.33□□□□□ -0.44
Pdgfrb-202ENSMUST00000115274 Mroh3A0A1D5RM54 893 aa12.33□□□□□ -0.44
Pdgfrb-202ENSMUST00000115274 Card11Q8CIS0 1159 aa12.32□□□□□ -0.44
Pdgfrb-202ENSMUST00000115274 Trim30dE9PWL0 497 aa12.32□□□□□ -0.44
Pdgfrb-202ENSMUST00000115274 Htatsf1Q8BGC0 757 aa12.32□□□□□ -0.44
Pdgfrb-202ENSMUST00000115274 Grwd1Q810D6 446 aaKnown RBP12.31□□□□□ -0.44
Pdgfrb-202ENSMUST00000115274 Lmod3E9QA62 571 aa12.31□□□□□ -0.44
Pdgfrb-202ENSMUST00000115274 CntlnA2AM05 1397 aa12.31□□□□□ -0.44
Pdgfrb-202ENSMUST00000115274 IqubQ8CDK3 788 aa12.3□□□□□ -0.44
Pdgfrb-202ENSMUST00000115274 Fyco1Q8VDC1 1437 aa12.3□□□□□ -0.44
Pdgfrb-202ENSMUST00000115274 Ppm1gQ61074 542 aa12.29□□□□□ -0.44
Pdgfrb-202ENSMUST00000115274 Srpk2O54781 681 aaKnown RBP12.29□□□□□ -0.44
Pdgfrb-202ENSMUST00000115274 Baz1bQ9Z277 1479 aa12.28□□□□□ -0.44
Pdgfrb-202ENSMUST00000115274 Kdm2aP59997 1161 aa12.28□□□□□ -0.44
Pdgfrb-202ENSMUST00000115274 Vsig10D3YX43 558 aa12.28□□□□□ -0.44
Pdgfrb-202ENSMUST00000115274 BccipQ9CWI3 316 aa12.27□□□□□ -0.44
Pdgfrb-202ENSMUST00000115274 Cttnbp2B9EJA2 1648 aa12.27□□□□□ -0.44
Pdgfrb-202ENSMUST00000115274 Gm20521D3Z5F7 333 aa12.26□□□□□ -0.45
Pdgfrb-202ENSMUST00000115274 Carmil1Q6EDY6 1374 aa12.25□□□□□ -0.45
Pdgfrb-202ENSMUST00000115274 Rpap1Q80TE0 1409 aa12.25□□□□□ -0.45
Pdgfrb-202ENSMUST00000115274 Hspa5P20029 655 aaKnown RBP12.23□□□□□ -0.45
Pdgfrb-202ENSMUST00000115274 Gtf3c3Q3TMP1 882 aa12.23□□□□□ -0.45
Pdgfrb-202ENSMUST00000115274 Supt16hQ920B9 1047 aa12.23□□□□□ -0.45
Pdgfrb-202ENSMUST00000115274 Arhgap35Q91YM2 1499 aa12.23□□□□□ -0.45
Pdgfrb-202ENSMUST00000115274 Rangap1P46061 589 aaKnown RBP12.22□□□□□ -0.45
Pdgfrb-202ENSMUST00000115274 Rapgef2Q8CHG7 1496 aa12.22□□□□□ -0.45
Pdgfrb-202ENSMUST00000115274 Tcerg1Q8CGF7 1100 aaKnown RBP12.22□□□□□ -0.45
Pdgfrb-202ENSMUST00000115274 PtmaP26350 111 aa12.21□□□□□ -0.45
Pdgfrb-202ENSMUST00000115274 Map4P27546 1125 aaKnown RBP12.21□□□□□ -0.46
Pdgfrb-202ENSMUST00000115274 Iqgap2Q3UQ44 1575 aa12.21□□□□□ -0.46
Pdgfrb-202ENSMUST00000115274 Ipo9Q91YE6 1041 aa12.2□□□□□ -0.46
Pdgfrb-202ENSMUST00000115274 Pkd2O35245 966 aa12.2□□□□□ -0.46
Pdgfrb-202ENSMUST00000115274 Plcb2A3KGF7 1181 aa12.2□□□□□ -0.46
Pdgfrb-202ENSMUST00000115274 AU015836B2RUM3 263 aa12.2□□□□□ -0.46
Pdgfrb-202ENSMUST00000115274 Dhx57Q6P5D3 1388 aaKnown RBP12.19□□□□□ -0.46
Pdgfrb-202ENSMUST00000115274 LrpprcQ6PB66 1392 aaKnown RBP12.19□□□□□ -0.46
Pdgfrb-202ENSMUST00000115274 Exosc9Q9JHI7 438 aaKnown RBP12.18□□□□□ -0.46
Pdgfrb-202ENSMUST00000115274 AknaQ80VW7 1404 aa12.18□□□□□ -0.46
Pdgfrb-202ENSMUST00000115274 Stk24Q99KH8 431 aa12.17□□□□□ -0.46
Pdgfrb-202ENSMUST00000115274 Slc4a3P16283 1227 aa12.17□□□□□ -0.46
Pdgfrb-202ENSMUST00000115274 Fgd1P52734 960 aa12.16□□□□□ -0.46
Pdgfrb-202ENSMUST00000115274 Cabp1Q9JLK7 227 aa12.16□□□□□ -0.46
Pdgfrb-202ENSMUST00000115274 Mbd3Q9Z2D8 285 aaKnown RBP12.16□□□□□ -0.46
Pdgfrb-202ENSMUST00000115274 Mphosph9A6H5Y1 991 aa12.15□□□□□ -0.46
Pdgfrb-202ENSMUST00000115274 Dbr1Q923B1 550 aa12.14□□□□□ -0.47
Pdgfrb-202ENSMUST00000115274 Trim26Q99PN3 545 aa12.14□□□□□ -0.47
Pdgfrb-202ENSMUST00000115274 Znf316Q6PGE4 1016 aa12.13□□□□□ -0.47
Pdgfrb-202ENSMUST00000115274 Arid4bA2CG63 1314 aaKnown RBP12.13□□□□□ -0.47
Pdgfrb-202ENSMUST00000115274 Stag3O70576 1240 aa12.13□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 69.6 ms