RNA–Protein interactions for RNA: ENSMUST00000115274.1

Pdgfrb-202, Transcript of Platelet-derived growth factor receptor beta, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdgfrb, Length 5,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfrb-202ENSMUST00000115274 Rhox8Q6VSS7 320 aa16.6■□□□□ 0.25
Pdgfrb-202ENSMUST00000115274 Rpgrip1Q9EPQ2 1331 aa15.71■□□□□ 0.11
Pdgfrb-202ENSMUST00000115274 NischQ80TM9 1593 aa15.25■□□□□ 0.03
Pdgfrb-202ENSMUST00000115274 Las1lA2BE28 776 aaKnown RBP15.03■□□□□ -0
Pdgfrb-202ENSMUST00000115274 Ehmt2Q9Z148 1263 aaKnown RBP14.97□□□□□ -0.01
Pdgfrb-202ENSMUST00000115274 Cngb1E1AZ71 1325 aa14.84□□□□□ -0.03
Pdgfrb-202ENSMUST00000115274 Ccdc136Q3TVA9 1136 aa14.84□□□□□ -0.03
Pdgfrb-202ENSMUST00000115274 Esf1Q3V1V3 845 aaKnown RBP14.7□□□□□ -0.06
Pdgfrb-202ENSMUST00000115274 Trim41Q5NCC3 630 aa14.68□□□□□ -0.06
Pdgfrb-202ENSMUST00000115274 Wdr66E9Q743 1299 aa14.54□□□□□ -0.08
Pdgfrb-202ENSMUST00000115274 Acin1Q9JIX8 1338 aaKnown RBP14.53□□□□□ -0.08
Pdgfrb-202ENSMUST00000115274 Zeb1Q64318 1117 aa14.48□□□□□ -0.09
Pdgfrb-202ENSMUST00000115274 Pelp1Q9DBD5 1123 aaKnown RBP14.46□□□□□ -0.09
Pdgfrb-202ENSMUST00000115274 Abcc9P70170 1546 aa14.41□□□□□ -0.1
Pdgfrb-202ENSMUST00000115274 Myt1Q8CFC2 1127 aa14.38□□□□□ -0.11
Pdgfrb-202ENSMUST00000115274 Gab3Q8BSM5 595 aa14.38□□□□□ -0.11
Pdgfrb-202ENSMUST00000115274 CenpbP27790 599 aa14.3□□□□□ -0.12
Pdgfrb-202ENSMUST00000115274 Npm2Q80W85 207 aa14.3□□□□□ -0.12
Pdgfrb-202ENSMUST00000115274 Ccdc180J3QNE4 1664 aa14.18□□□□□ -0.14
Pdgfrb-202ENSMUST00000115274 Abcc8B2RUS7 1588 aa14.15□□□□□ -0.14
Pdgfrb-202ENSMUST00000115274 Myt1lP97500 1187 aa14.14□□□□□ -0.15
Pdgfrb-202ENSMUST00000115274 NefmP08553 848 aa14.13□□□□□ -0.15
Pdgfrb-202ENSMUST00000115274 Pcgf6Q99NA9 353 aa14.12□□□□□ -0.15
Pdgfrb-202ENSMUST00000115274 Rtl1Q7M732 1744 aa14.11□□□□□ -0.15
Pdgfrb-202ENSMUST00000115274 HrcG5E8J6 738 aa14.11□□□□□ -0.15
Pdgfrb-202ENSMUST00000115274 Ube2uB1AUC4 352 aa14.1□□□□□ -0.15
Pdgfrb-202ENSMUST00000115274 DiexfQ8BTT6 772 aaKnown RBP14.06□□□□□ -0.16
Pdgfrb-202ENSMUST00000115274 Gm35339A0A140LHH9 1649 aa14.04□□□□□ -0.16
Pdgfrb-202ENSMUST00000115274 Amer1Q7TS75 1132 aa14.02□□□□□ -0.16
Pdgfrb-202ENSMUST00000115274 Zcchc6Q5BLK4 1491 aaKnown RBP13.98□□□□□ -0.17
Pdgfrb-202ENSMUST00000115274 Stra8P70278 393 aa13.87□□□□□ -0.19
Pdgfrb-202ENSMUST00000115274 Cdk11bP24788 784 aaKnown RBP13.87□□□□□ -0.19
Pdgfrb-202ENSMUST00000115274 UbtfP25976 765 aaKnown RBP13.84□□□□□ -0.19
Pdgfrb-202ENSMUST00000115274 Il27Q8K3I6 234 aa13.79□□□□□ -0.2
Pdgfrb-202ENSMUST00000115274 Supt5hO55201 1082 aaKnown RBP13.77□□□□□ -0.21
Pdgfrb-202ENSMUST00000115274 Nop58Q6DFW4 536 aaKnown RBP13.69□□□□□ -0.22
Pdgfrb-202ENSMUST00000115274 Tnnt3Q9QZ47 272 aa13.69□□□□□ -0.22
Pdgfrb-202ENSMUST00000115274 Slc24a1Q91WD8 1130 aa13.61□□□□□ -0.23
Pdgfrb-202ENSMUST00000115274 Ttbk1Q6PCN3 1308 aa13.56□□□□□ -0.24
Pdgfrb-202ENSMUST00000115274 Rtl5Q5DTT4 599 aa13.49□□□□□ -0.25
Pdgfrb-202ENSMUST00000115274 Ap3b1Q9Z1T1 1105 aa13.48□□□□□ -0.25
Pdgfrb-202ENSMUST00000115274 4933416C03RikQ3V063 378 aa13.45□□□□□ -0.26
Pdgfrb-202ENSMUST00000115274 Fam50aQ9WV03 339 aaKnown RBP13.44□□□□□ -0.26
Pdgfrb-202ENSMUST00000115274 Brd4Q9ESU6 1400 aaKnown RBP13.44□□□□□ -0.26
Pdgfrb-202ENSMUST00000115274 Neurod1Q60867 357 aa13.42□□□□□ -0.26
Pdgfrb-202ENSMUST00000115274 Ppargc1bQ8VHJ7 1014 aa13.42□□□□□ -0.26
Pdgfrb-202ENSMUST00000115274 Rb1cc1Q9ESK9 1588 aa13.41□□□□□ -0.26
Pdgfrb-202ENSMUST00000115274 TonslQ6NZL6 1363 aa13.41□□□□□ -0.26
Pdgfrb-202ENSMUST00000115274 Npm1Q61937 292 aaKnown RBP13.41□□□□□ -0.26
Pdgfrb-202ENSMUST00000115274 Mier1Q5UAK0 511 aa13.4□□□□□ -0.26
Pdgfrb-202ENSMUST00000115274 NrdcQ8BHG1 1161 aa13.35□□□□□ -0.27
Pdgfrb-202ENSMUST00000115274 NclP09405 707 aaKnown RBP13.33□□□□□ -0.28
Pdgfrb-202ENSMUST00000115274 ClspnQ80YR7 1315 aa13.32□□□□□ -0.28
Pdgfrb-202ENSMUST00000115274 Eif5bQ05D44 1216 aaKnown RBP13.3□□□□□ -0.28
Pdgfrb-202ENSMUST00000115274 Anks4bQ8K3X6 423 aa13.3□□□□□ -0.28
Pdgfrb-202ENSMUST00000115274 Dcaf1Q80TR8 1506 aa13.29□□□□□ -0.28
Pdgfrb-202ENSMUST00000115274 Bcl11aQ9QYE3 773 aa13.29□□□□□ -0.28
Pdgfrb-202ENSMUST00000115274 NacadQ5SWP3 1504 aa13.28□□□□□ -0.28
Pdgfrb-202ENSMUST00000115274 Anp32aO35381 247 aa13.27□□□□□ -0.28
Pdgfrb-202ENSMUST00000115274 NeflP08551 543 aa13.26□□□□□ -0.29
Pdgfrb-202ENSMUST00000115274 4930567H17RikQ3V0K5 233 aa13.26□□□□□ -0.29
Pdgfrb-202ENSMUST00000115274 Cep164Q5DU05 1446 aa13.25□□□□□ -0.29
Pdgfrb-202ENSMUST00000115274 Csrnp3P59055 597 aa13.24□□□□□ -0.29
Pdgfrb-202ENSMUST00000115274 Anp32bQ9EST5 272 aaKnown RBP13.24□□□□□ -0.29
Pdgfrb-202ENSMUST00000115274 Aplp2Q06335 707 aa13.22□□□□□ -0.29
Pdgfrb-202ENSMUST00000115274 Sall2Q9QX96 1004 aa13.18□□□□□ -0.3
Pdgfrb-202ENSMUST00000115274 Plekhg3Q4VAC9 1341 aa13.17□□□□□ -0.3
Pdgfrb-202ENSMUST00000115274 Chic1Q8CBW7 227 aa13.16□□□□□ -0.3
Pdgfrb-202ENSMUST00000115274 Lmod2Q3UHZ5 550 aa13.16□□□□□ -0.3
Pdgfrb-202ENSMUST00000115274 Baz1aO88379 1555 aa13.13□□□□□ -0.31
Pdgfrb-202ENSMUST00000115274 Gm38655A0A286YDK6 273 aa13.13□□□□□ -0.31
Pdgfrb-202ENSMUST00000115274 Kdm5dQ62240 1548 aa13.13□□□□□ -0.31
Pdgfrb-202ENSMUST00000115274 Os9Q8K2C7 672 aa13.11□□□□□ -0.31
Pdgfrb-202ENSMUST00000115274 Clip1Q922J3 1391 aa13.09□□□□□ -0.31
Pdgfrb-202ENSMUST00000115274 Ubl4bQ9CQ84 188 aa13.06□□□□□ -0.32
Pdgfrb-202ENSMUST00000115274 1700123L14RikQ3V2K7 440 aa13.05□□□□□ -0.32
Pdgfrb-202ENSMUST00000115274 DaxxO35613 739 aa13□□□□□ -0.33
Pdgfrb-202ENSMUST00000115274 Golga3P55937 1487 aa12.95□□□□□ -0.34
Pdgfrb-202ENSMUST00000115274 Ccer2J3QPU5 274 aa12.95□□□□□ -0.34
Pdgfrb-202ENSMUST00000115274 Hnrnpul2Q00PI9 745 aaKnown RBP12.93□□□□□ -0.34
Pdgfrb-202ENSMUST00000115274 Zbtb7cQ8VCZ7 619 aa12.93□□□□□ -0.34
Pdgfrb-202ENSMUST00000115274 Hdac5Q9Z2V6 1113 aa12.9□□□□□ -0.35
Pdgfrb-202ENSMUST00000115274 ScribQ80U72 1612 aa12.89□□□□□ -0.35
Pdgfrb-202ENSMUST00000115274 Calr4Q3TQS0 420 aa12.88□□□□□ -0.35
Pdgfrb-202ENSMUST00000115274 Mapk8ip2Q9ERE9 830 aa12.87□□□□□ -0.35
Pdgfrb-202ENSMUST00000115274 Rsf1E9PWW9 1441 aaKnown RBP12.87□□□□□ -0.35
Pdgfrb-202ENSMUST00000115274 Eid3Q3V124 375 aa12.85□□□□□ -0.35
Pdgfrb-202ENSMUST00000115274 Ifnlr1Q8CGK5 535 aa12.85□□□□□ -0.35
Pdgfrb-202ENSMUST00000115274 Kif15Q6P9L6 1387 aa12.83□□□□□ -0.36
Pdgfrb-202ENSMUST00000115274 Fkbp15Q6P9Q6 1216 aaKnown RBP12.82□□□□□ -0.36
Pdgfrb-202ENSMUST00000115274 Ppp4r2Q0VGB7 417 aa12.81□□□□□ -0.36
Pdgfrb-202ENSMUST00000115274 Ercc6F8VPZ5 1481 aa12.81□□□□□ -0.36
Pdgfrb-202ENSMUST00000115274 BlmO88700 1416 aa12.81□□□□□ -0.36
Pdgfrb-202ENSMUST00000115274 Setd5Q5XJV7 1441 aa12.8□□□□□ -0.36
Pdgfrb-202ENSMUST00000115274 Gm13697A2AK42 830 aa12.78□□□□□ -0.36
Pdgfrb-202ENSMUST00000115274 Ccdc9Q8VC31 543 aaKnown RBP12.78□□□□□ -0.36
Pdgfrb-202ENSMUST00000115274 Erich6D3Z6S9 713 aa12.77□□□□□ -0.37
Pdgfrb-202ENSMUST00000115274 Fam71e1A1L3C1 212 aa12.76□□□□□ -0.37
Pdgfrb-202ENSMUST00000115274 Wdr43Q6ZQL4 677 aaKnown RBP12.75□□□□□ -0.37
Pdgfrb-202ENSMUST00000115274 Ccdc18Q640L5 1455 aa12.75□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms