RNA–Protein interactions for RNA: ENSMUST00000085017.4

Ccdc90b-202, Transcript of Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

TSL 1 (best) BASIC

Gene Ccdc90b, Length 1,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90b-202ENSMUST00000085017 Pbrm1Q8BSQ9 1634 aaKnown RBP19.11■□□□□ 0.65
Ccdc90b-202ENSMUST00000085017 Ythdc2B2RR83 1445 aaKnown RBP19.1■□□□□ 0.65
Ccdc90b-202ENSMUST00000085017 AknaQ80VW7 1404 aa19.1■□□□□ 0.65
Ccdc90b-202ENSMUST00000085017 AqrQ8CFQ3 1481 aaKnown RBP19.1■□□□□ 0.65
Ccdc90b-202ENSMUST00000085017 Rapgef2Q8CHG7 1496 aa19.08■□□□□ 0.64
Ccdc90b-202ENSMUST00000085017 Abcc1O35379 1528 aa19.07■□□□□ 0.64
Ccdc90b-202ENSMUST00000085017 Grin2aP35436 1464 aa19.05■□□□□ 0.64
Ccdc90b-202ENSMUST00000085017 Magi3Q9EQJ9 1476 aa19.05■□□□□ 0.64
Ccdc90b-202ENSMUST00000085017 Plekhg3Q4VAC9 1341 aa19.01■□□□□ 0.63
Ccdc90b-202ENSMUST00000085017 Fmn1Q05860 1466 aa19■□□□□ 0.63
Ccdc90b-202ENSMUST00000085017 Ppp1r18Q8BQ30 594 aa18.99■□□□□ 0.63
Ccdc90b-202ENSMUST00000085017 Efcab5A0JP43 1406 aa18.99■□□□□ 0.63
Ccdc90b-202ENSMUST00000085017 Setbp1Q9Z180 1582 aa18.94■□□□□ 0.62
Ccdc90b-202ENSMUST00000085017 Trap1aP19473 224 aa18.94■□□□□ 0.62
Ccdc90b-202ENSMUST00000085017 CadpsQ80TJ1 1355 aa18.92■□□□□ 0.62
Ccdc90b-202ENSMUST00000085017 Top2aQ01320 1528 aaKnown RBP18.92■□□□□ 0.62
Ccdc90b-202ENSMUST00000085017 Chd1P40201 1711 aa18.91■□□□□ 0.62
Ccdc90b-202ENSMUST00000085017 Soga1E1U8D0 1418 aa18.89■□□□□ 0.62
Ccdc90b-202ENSMUST00000085017 Pla2r1Q62028 1487 aa18.87■□□□□ 0.61
Ccdc90b-202ENSMUST00000085017 Ifnlr1Q8CGK5 535 aa18.84■□□□□ 0.61
Ccdc90b-202ENSMUST00000085017 Neo1P97798 1493 aa18.82■□□□□ 0.6
Ccdc90b-202ENSMUST00000085017 Arhgap27A2AB59 869 aa18.8■□□□□ 0.6
Ccdc90b-202ENSMUST00000085017 Dnmt1P13864 1620 aaKnown RBP18.79■□□□□ 0.6
Ccdc90b-202ENSMUST00000085017 Ak9G3UYQ4 1894 aa18.79■□□□□ 0.6
Ccdc90b-202ENSMUST00000085017 AI481877A2ALV5 1481 aa18.76■□□□□ 0.59
Ccdc90b-202ENSMUST00000085017 Gm14025A2AP89 1413 aa18.75■□□□□ 0.59
Ccdc90b-202ENSMUST00000085017 BC005561E9Q5E2 1589 aa18.75■□□□□ 0.59
Ccdc90b-202ENSMUST00000085017 Abcc2Q8VI47 1543 aa18.74■□□□□ 0.59
Ccdc90b-202ENSMUST00000085017 Gpatch8A2A6A1 1505 aa18.72■□□□□ 0.59
Ccdc90b-202ENSMUST00000085017 Ccdc88bQ4QRL3 1481 aa18.72■□□□□ 0.59
Ccdc90b-202ENSMUST00000085017 EprsQ8CGC7 1512 aaKnown RBP18.7■□□□□ 0.58
Ccdc90b-202ENSMUST00000085017 SynmQ70IV5 1561 aa18.69■□□□□ 0.58
Ccdc90b-202ENSMUST00000085017 PxdnQ3UQ28 1475 aa18.69■□□□□ 0.58
Ccdc90b-202ENSMUST00000085017 NrkQ9R0G8 1455 aa18.68■□□□□ 0.58
Ccdc90b-202ENSMUST00000085017 Map3k4O08648 1597 aa18.67■□□□□ 0.58
Ccdc90b-202ENSMUST00000085017 Abca16E9PWJ7 1678 aa18.65■□□□□ 0.58
Ccdc90b-202ENSMUST00000085017 Alpk3Q924C5 1678 aa18.65■□□□□ 0.58
Ccdc90b-202ENSMUST00000085017 Dnajc5gQ8C632 165 aa18.65■□□□□ 0.58
Ccdc90b-202ENSMUST00000085017 Clasp1Q80TV8 1535 aaKnown RBP18.63■□□□□ 0.57
Ccdc90b-202ENSMUST00000085017 Arid3cA6PWV5 409 aa18.63■□□□□ 0.57
Ccdc90b-202ENSMUST00000085017 Arhgef12Q8R4H2 1543 aaKnown RBP18.61■□□□□ 0.57
Ccdc90b-202ENSMUST00000085017 WizO88286 1684 aaKnown RBP18.61■□□□□ 0.57
Ccdc90b-202ENSMUST00000085017 Ttc37F8VPK0 1563 aa18.61■□□□□ 0.57
Ccdc90b-202ENSMUST00000085017 Shroom4Q1W617 1475 aa18.61■□□□□ 0.57
Ccdc90b-202ENSMUST00000085017 Mapkbp1Q6NS57 1503 aa18.6■□□□□ 0.57
Ccdc90b-202ENSMUST00000085017 Zeb1Q64318 1117 aa18.6■□□□□ 0.57
Ccdc90b-202ENSMUST00000085017 AdgbG3UZ78 1657 aa18.6■□□□□ 0.57
Ccdc90b-202ENSMUST00000085017 Fkbp15Q6P9Q6 1216 aaKnown RBP18.59■□□□□ 0.57
Ccdc90b-202ENSMUST00000085017 TchhA0A0B4J1F9 1599 aa18.59■□□□□ 0.57
Ccdc90b-202ENSMUST00000085017 Depdc5P61460 1591 aa18.57■□□□□ 0.56
Ccdc90b-202ENSMUST00000085017 Arhgef11Q68FM7 1552 aa18.55■□□□□ 0.56
Ccdc90b-202ENSMUST00000085017 Slx4Q6P1D7 1565 aa18.54■□□□□ 0.56
Ccdc90b-202ENSMUST00000085017 Eif4g1Q6NZJ6 1600 aaKnown RBP18.54■□□□□ 0.56
Ccdc90b-202ENSMUST00000085017 Jph4Q80WT0 628 aa18.54■□□□□ 0.56
Ccdc90b-202ENSMUST00000085017 Znf219Q6IQX8 726 aa18.53■□□□□ 0.56
Ccdc90b-202ENSMUST00000085017 MlecQ6ZQI3 291 aaKnown RBP18.51■□□□□ 0.55
Ccdc90b-202ENSMUST00000085017 Adamts12Q811B3 1600 aa18.5■□□□□ 0.55
Ccdc90b-202ENSMUST00000085017 Cyb5rlB1AS42 316 aa18.49■□□□□ 0.55
Ccdc90b-202ENSMUST00000085017 Fndc1E9Q043 1732 aa18.48■□□□□ 0.55
Ccdc90b-202ENSMUST00000085017 Znf608Q56A10 1511 aa18.47■□□□□ 0.55
Ccdc90b-202ENSMUST00000085017 Lrrc9Q8CDN9 1456 aa18.46■□□□□ 0.55
Ccdc90b-202ENSMUST00000085017 Rpap1Q80TE0 1409 aa18.45■□□□□ 0.54
Ccdc90b-202ENSMUST00000085017 Zfyve16Q80U44 1528 aa18.44■□□□□ 0.54
Ccdc90b-202ENSMUST00000085017 Igf1rQ60751 1373 aa18.37■□□□□ 0.53
Ccdc90b-202ENSMUST00000085017 Gm7298A0A0N4SVU1 1476 aa18.33■□□□□ 0.52
Ccdc90b-202ENSMUST00000085017 Mroh2bQ7M6Y6 1581 aa18.33■□□□□ 0.52
Ccdc90b-202ENSMUST00000085017 Ercc6l2Q9JIM3 1537 aa18.31■□□□□ 0.52
Ccdc90b-202ENSMUST00000085017 Kdm5bQ80Y84 1544 aa18.29■□□□□ 0.52
Ccdc90b-202ENSMUST00000085017 Wdr7Q920I9 1489 aa18.29■□□□□ 0.52
Ccdc90b-202ENSMUST00000085017 Abca5Q8K448 1642 aa18.29■□□□□ 0.52
Ccdc90b-202ENSMUST00000085017 Brwd3A2AHJ4 1799 aa18.28■□□□□ 0.52
Ccdc90b-202ENSMUST00000085017 WrnO09053 1401 aa18.28■□□□□ 0.52
Ccdc90b-202ENSMUST00000085017 Hecw2Q6I6G8 1578 aa18.26■□□□□ 0.51
Ccdc90b-202ENSMUST00000085017 ArsiQ32KI9 573 aa18.25■□□□□ 0.51
Ccdc90b-202ENSMUST00000085017 Npm2Q80W85 207 aa18.22■□□□□ 0.51
Ccdc90b-202ENSMUST00000085017 Kdm6bQ5NCY0 1641 aa18.2■□□□□ 0.5
Ccdc90b-202ENSMUST00000085017 AglF8VPN4 1532 aa18.2■□□□□ 0.5
Ccdc90b-202ENSMUST00000085017 Carmil1Q6EDY6 1374 aa18.2■□□□□ 0.5
Ccdc90b-202ENSMUST00000085017 Rrbp1Q99PL5 1605 aaKnown RBP18.18■□□□□ 0.5
Ccdc90b-202ENSMUST00000085017 Atp10dQ8K2X1 1416 aa18.18■□□□□ 0.5
Ccdc90b-202ENSMUST00000085017 Map3k1P53349 1493 aa18.16■□□□□ 0.5
Ccdc90b-202ENSMUST00000085017 Rnf17Q99MV7 1640 aa18.16■□□□□ 0.5
Ccdc90b-202ENSMUST00000085017 Fbxo41Q6NS60 873 aa18.15■□□□□ 0.5
Ccdc90b-202ENSMUST00000085017 NhsB1AV60 1647 aa18.14■□□□□ 0.49
Ccdc90b-202ENSMUST00000085017 Cul7Q8VE73 1689 aa18.12■□□□□ 0.49
Ccdc90b-202ENSMUST00000085017 Arhgap31A6X8Z5 1425 aa18.11■□□□□ 0.49
Ccdc90b-202ENSMUST00000085017 Naip2Q9QUK4 1447 aa18.1■□□□□ 0.49
Ccdc90b-202ENSMUST00000085017 A2mQ6GQT1 1474 aa18.04■□□□□ 0.48
Ccdc90b-202ENSMUST00000085017 Cux1P53564 1515 aa18.02■□□□□ 0.48
Ccdc90b-202ENSMUST00000085017 Chrna2Q91X60 512 aa18.02■□□□□ 0.48
Ccdc90b-202ENSMUST00000085017 Ccdc141E9Q8Q6 1531 aa18.01■□□□□ 0.47
Ccdc90b-202ENSMUST00000085017 Arhgap35Q91YM2 1499 aa18.01■□□□□ 0.47
Ccdc90b-202ENSMUST00000085017 Cypt1Q8CH20 168 aa17.99■□□□□ 0.47
Ccdc90b-202ENSMUST00000085017 Polr1aO35134 1717 aaKnown RBP17.99■□□□□ 0.47
Ccdc90b-202ENSMUST00000085017 PtprmP28828 1452 aa17.99■□□□□ 0.47
Ccdc90b-202ENSMUST00000085017 Mroh2aD3Z750 1679 aa17.96■□□□□ 0.47
Ccdc90b-202ENSMUST00000085017 MyclP10166 368 aa17.94■□□□□ 0.46
Ccdc90b-202ENSMUST00000085017 Rsph4aQ8BYM7 716 aa17.94■□□□□ 0.46
Ccdc90b-202ENSMUST00000085017 Abca8bQ8K440 1620 aa17.93■□□□□ 0.46
Ccdc90b-202ENSMUST00000085017 Qser1A2BIE1 1698 aa17.92■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms