Protein–RNA interactions for Protein: Q8CH20

Cypt1, Cysteine-rich perinuclear theca protein 1, mousemouse

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cypt1Q8CH20 Gm25239-201ENSMUST00000174915 86 ntBASIC55.28■■■■■ 6.44
Cypt1Q8CH20 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC52.42■■■■■ 5.98
Cypt1Q8CH20 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC51.33■■■■■ 5.81
Cypt1Q8CH20 Gm24109-201ENSMUST00000175489 103 ntBASIC49.47■■■■■ 5.51
Cypt1Q8CH20 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC47.72■■■■■ 5.23
Cypt1Q8CH20 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC47.61■■■■■ 5.21
Cypt1Q8CH20 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC47.42■■■■■ 5.18
Cypt1Q8CH20 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC47.08■■■■■ 5.13
Cypt1Q8CH20 AC153911.1-202ENSMUST00000218534 1034 ntBASIC46.99■■■■■ 5.11
Cypt1Q8CH20 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC46.92■■■■■ 5.1
Cypt1Q8CH20 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC46.76■■■■■ 5.08
Cypt1Q8CH20 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC45.91■■■■■ 4.94
Cypt1Q8CH20 Gm23366-201ENSMUST00000175022 89 ntBASIC45.78■■■■■ 4.92
Cypt1Q8CH20 Gm15042-201ENSMUST00000120212 883 ntBASIC45.6■■■■■ 4.89
Cypt1Q8CH20 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC45.44■■■■■ 4.86
Cypt1Q8CH20 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC45.33■■■■■ 4.85
Cypt1Q8CH20 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC44.84■■■■■ 4.77
Cypt1Q8CH20 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC44.81■■■■■ 4.76
Cypt1Q8CH20 Gm25238-201ENSMUST00000174914 89 ntBASIC44.55■■■■■ 4.72
Cypt1Q8CH20 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC44.19■■■■■ 4.66
Cypt1Q8CH20 Gm15045-201ENSMUST00000117359 883 ntBASIC44.16■■■■■ 4.66
Cypt1Q8CH20 Gm26115-201ENSMUST00000175605 87 ntBASIC44.11■■■■■ 4.65
Cypt1Q8CH20 Gm25262-201ENSMUST00000174934 133 ntBASIC44.04■■■■■ 4.64
Cypt1Q8CH20 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC43.96■■■■■ 4.63
Cypt1Q8CH20 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC43.94■■■■■ 4.62
Cypt1Q8CH20 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC43.87■■■■■ 4.61
Cypt1Q8CH20 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC43.76■■■■■ 4.6
Cypt1Q8CH20 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC43.69■■■■■ 4.58
Cypt1Q8CH20 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC43.52■■■■■ 4.56
Cypt1Q8CH20 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC43.51■■■■■ 4.56
Cypt1Q8CH20 Gm8109-201ENSMUST00000194076 746 ntBASIC43.45■■■■■ 4.55
Cypt1Q8CH20 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC43.29■■■■■ 4.52
Cypt1Q8CH20 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC43.19■■■■■ 4.5
Cypt1Q8CH20 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC42.92■■■■■ 4.46
Cypt1Q8CH20 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC42.8■■■■■ 4.44
Cypt1Q8CH20 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC42.75■■■■■ 4.43
Cypt1Q8CH20 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC42.71■■■■■ 4.43
Cypt1Q8CH20 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC42.7■■■■■ 4.43
Cypt1Q8CH20 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC42.66■■■■■ 4.42
Cypt1Q8CH20 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC42.18■■■■■ 4.34
Cypt1Q8CH20 Gm24804-201ENSMUST00000174982 85 ntBASIC41.73■■■■■ 4.27
Cypt1Q8CH20 Gm5987-201ENSMUST00000196433 1151 ntBASIC41.61■■■■■ 4.25
Cypt1Q8CH20 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC41.57■■■■■ 4.25
Cypt1Q8CH20 Zfp131-205ENSMUST00000223812 663 ntBASIC41.56■■■■■ 4.24
Cypt1Q8CH20 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC41.45■■■■■ 4.23
Cypt1Q8CH20 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC41.42■■■■■ 4.22
Cypt1Q8CH20 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC41.4■■■■■ 4.22
Cypt1Q8CH20 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC41.38■■■■■ 4.21
Cypt1Q8CH20 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC41.31■■■■■ 4.2
Cypt1Q8CH20 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC41.19■■■■■ 4.18
Cypt1Q8CH20 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC41.13■■■■■ 4.17
Cypt1Q8CH20 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC41.01■■■■■ 4.16
Cypt1Q8CH20 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC41■■■■■ 4.15
Cypt1Q8CH20 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC40.87■■■■■ 4.13
Cypt1Q8CH20 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC40.85■■■■■ 4.13
Cypt1Q8CH20 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC40.76■■■■■ 4.12
Cypt1Q8CH20 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC40.75■■■■■ 4.11
Cypt1Q8CH20 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC40.75■■■■■ 4.11
Cypt1Q8CH20 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC40.69■■■■■ 4.1
Cypt1Q8CH20 Rab21-202ENSMUST00000218831 843 ntBASIC40.69■■■■■ 4.1
Cypt1Q8CH20 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC40.64■■■■■ 4.1
Cypt1Q8CH20 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC40.59■■■■■ 4.09
Cypt1Q8CH20 Gm15039-201ENSMUST00000118914 875 ntBASIC40.55■■■■■ 4.08
Cypt1Q8CH20 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC40.45■■■■■ 4.07
Cypt1Q8CH20 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC40.4■■■■■ 4.06
Cypt1Q8CH20 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC40.3■■■■■ 4.04
Cypt1Q8CH20 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC40.11■■■■■ 4.01
Cypt1Q8CH20 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC40.1■■■■■ 4.01
Cypt1Q8CH20 Gm17082-201ENSMUST00000166043 1091 ntBASIC39.97■■■■□ 3.99
Cypt1Q8CH20 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC39.96■■■■□ 3.99
Cypt1Q8CH20 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC39.95■■■■□ 3.99
Cypt1Q8CH20 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC39.92■■■■□ 3.98
Cypt1Q8CH20 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC39.87■■■■□ 3.97
Cypt1Q8CH20 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC39.86■■■■□ 3.97
Cypt1Q8CH20 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC39.85■■■■□ 3.97
Cypt1Q8CH20 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC39.68■■■■□ 3.94
Cypt1Q8CH20 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
Cypt1Q8CH20 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC39.63■■■■□ 3.93
Cypt1Q8CH20 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC39.61■■■■□ 3.93
Cypt1Q8CH20 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC39.61■■■■□ 3.93
Cypt1Q8CH20 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC39.6■■■■□ 3.93
Cypt1Q8CH20 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC39.59■■■■□ 3.93
Cypt1Q8CH20 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC39.57■■■■□ 3.93
Cypt1Q8CH20 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC39.56■■■■□ 3.92
Cypt1Q8CH20 Gm27325-201ENSMUST00000175467 74 ntBASIC39.5■■■■□ 3.91
Cypt1Q8CH20 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC39.46■■■■□ 3.91
Cypt1Q8CH20 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC39.3■■■■□ 3.88
Cypt1Q8CH20 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC39.28■■■■□ 3.88
Cypt1Q8CH20 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.88
Cypt1Q8CH20 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC39.23■■■■□ 3.87
Cypt1Q8CH20 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC39.14■■■■□ 3.86
Cypt1Q8CH20 Gm27322-201ENSMUST00000184007 104 ntBASIC39.12■■■■□ 3.85
Cypt1Q8CH20 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC39.1■■■■□ 3.85
Cypt1Q8CH20 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
Cypt1Q8CH20 Tdp2-203ENSMUST00000223804 1136 ntBASIC38.99■■■■□ 3.83
Cypt1Q8CH20 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC38.95■■■■□ 3.83
Cypt1Q8CH20 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC38.91■■■■□ 3.82
Cypt1Q8CH20 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC38.89■■■■□ 3.82
Cypt1Q8CH20 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
Cypt1Q8CH20 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC38.84■■■■□ 3.81
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms