RNA–Protein interactions for RNA: ENSMUST00000085017.4

Ccdc90b-202, Transcript of Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

TSL 1 (best) BASIC

Gene Ccdc90b, Length 1,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90b-202ENSMUST00000085017 Mapk8ip2Q9ERE9 830 aa26.54■■□□□ 1.84
Ccdc90b-202ENSMUST00000085017 Chic1Q8CBW7 227 aa26.44■■□□□ 1.82
Ccdc90b-202ENSMUST00000085017 Gm35339A0A140LHH9 1649 aa25.53■■□□□ 1.68
Ccdc90b-202ENSMUST00000085017 NischQ80TM9 1593 aa25.01■■□□□ 1.59
Ccdc90b-202ENSMUST00000085017 Abcc9P70170 1546 aa24.72■■□□□ 1.55
Ccdc90b-202ENSMUST00000085017 Abcc8B2RUS7 1588 aa24.39■■□□□ 1.5
Ccdc90b-202ENSMUST00000085017 ScribQ80U72 1612 aa23.96■■□□□ 1.43
Ccdc90b-202ENSMUST00000085017 Phf23Q8BSN5 401 aa23.76■■□□□ 1.39
Ccdc90b-202ENSMUST00000085017 Dnajc5bQ9CQ94 199 aa23.1■■□□□ 1.29
Ccdc90b-202ENSMUST00000085017 NacadQ5SWP3 1504 aa23.03■■□□□ 1.28
Ccdc90b-202ENSMUST00000085017 Kdm5dQ62240 1548 aa22.98■■□□□ 1.27
Ccdc90b-202ENSMUST00000085017 Sycp2Q9CUU3 1500 aa22.64■■□□□ 1.22
Ccdc90b-202ENSMUST00000085017 Gab3Q8BSM5 595 aa22.5■■□□□ 1.19
Ccdc90b-202ENSMUST00000085017 BicraF8VPZ9 1578 aa22.5■■□□□ 1.19
Ccdc90b-202ENSMUST00000085017 Plppr3Q7TPB0 716 aa22.34■■□□□ 1.17
Ccdc90b-202ENSMUST00000085017 Dcaf1Q80TR8 1506 aa22.22■■□□□ 1.15
Ccdc90b-202ENSMUST00000085017 Thoc2B1AZI6 1594 aaKnown RBP22.01■■□□□ 1.11
Ccdc90b-202ENSMUST00000085017 Pds5bQ4VA53 1446 aaKnown RBP21.9■■□□□ 1.1
Ccdc90b-202ENSMUST00000085017 Rb1cc1Q9ESK9 1588 aa21.73■■□□□ 1.07
Ccdc90b-202ENSMUST00000085017 Cc2d2aQ8CFW7 1633 aa21.67■■□□□ 1.06
Ccdc90b-202ENSMUST00000085017 Atad2bE9Q166 1460 aaKnown RBP21.58■■□□□ 1.05
Ccdc90b-202ENSMUST00000085017 Senp3Q9EP97 568 aaKnown RBP21.51■■□□□ 1.03
Ccdc90b-202ENSMUST00000085017 Ercc6F8VPZ5 1481 aa21.42■■□□□ 1.02
Ccdc90b-202ENSMUST00000085017 Dnajc5P60904 198 aa21.4■■□□□ 1.02
Ccdc90b-202ENSMUST00000085017 Fam135aQ6NS59 1506 aa21.35■■□□□ 1.01
Ccdc90b-202ENSMUST00000085017 Baz1aO88379 1555 aa21.34■■□□□ 1.01
Ccdc90b-202ENSMUST00000085017 Crybg2B7ZCC2 1516 aa21.28■■□□□ 1
Ccdc90b-202ENSMUST00000085017 Smarca2Q6DIC0 1577 aa21.28■■□□□ 1
Ccdc90b-202ENSMUST00000085017 Zcchc6Q5BLK4 1491 aaKnown RBP21.26■□□□□ 0.99
Ccdc90b-202ENSMUST00000085017 Trim41Q5NCC3 630 aa21.15■□□□□ 0.98
Ccdc90b-202ENSMUST00000085017 Iqgap2Q3UQ44 1575 aa21.15■□□□□ 0.98
Ccdc90b-202ENSMUST00000085017 Smarca4Q3TKT4 1613 aaKnown RBP21.13■□□□□ 0.97
Ccdc90b-202ENSMUST00000085017 Frmpd1A2AKB4 1549 aa21.09■□□□□ 0.97
Ccdc90b-202ENSMUST00000085017 Phldb1Q6PDH0 1371 aaKnown RBP21.08■□□□□ 0.97
Ccdc90b-202ENSMUST00000085017 Rhox8Q6VSS7 320 aa21.07■□□□□ 0.96
Ccdc90b-202ENSMUST00000085017 Wdr62Q3U3T8 1523 aa21.07■□□□□ 0.96
Ccdc90b-202ENSMUST00000085017 Ccdc180J3QNE4 1664 aa21.04■□□□□ 0.96
Ccdc90b-202ENSMUST00000085017 Cecr2E9Q2Z1 1453 aa21.03■□□□□ 0.96
Ccdc90b-202ENSMUST00000085017 Ubl4bQ9CQ84 188 aa21.01■□□□□ 0.95
Ccdc90b-202ENSMUST00000085017 Mrc2Q64449 1479 aa20.88■□□□□ 0.93
Ccdc90b-202ENSMUST00000085017 Baz1bQ9Z277 1479 aa20.88■□□□□ 0.93
Ccdc90b-202ENSMUST00000085017 Unc13aQ4KUS2 1712 aa20.72■□□□□ 0.91
Ccdc90b-202ENSMUST00000085017 Lrriq1Q0P5X1 1673 aa20.48■□□□□ 0.87
Ccdc90b-202ENSMUST00000085017 Rsf1E9PWW9 1441 aaKnown RBP20.38■□□□□ 0.85
Ccdc90b-202ENSMUST00000085017 CftrP26361 1476 aa20.33■□□□□ 0.85
Ccdc90b-202ENSMUST00000085017 Shroom2A2ALU4 1481 aa20.28■□□□□ 0.84
Ccdc90b-202ENSMUST00000085017 Cux2P70298 1426 aa20.26■□□□□ 0.83
Ccdc90b-202ENSMUST00000085017 Synj1Q8CHC4 1574 aa20.24■□□□□ 0.83
Ccdc90b-202ENSMUST00000085017 Cttnbp2B9EJA2 1648 aa20.23■□□□□ 0.83
Ccdc90b-202ENSMUST00000085017 Kif21aQ9QXL2 1672 aa20.23■□□□□ 0.83
Ccdc90b-202ENSMUST00000085017 Col17a1Q07563 1470 aa20.22■□□□□ 0.83
Ccdc90b-202ENSMUST00000085017 Eif4g3Q80XI3 1579 aaKnown RBP20.13■□□□□ 0.81
Ccdc90b-202ENSMUST00000085017 Kif15Q6P9L6 1387 aa20.13■□□□□ 0.81
Ccdc90b-202ENSMUST00000085017 Pabpn1Q8CCS6 302 aaKnown RBP20.03■□□□□ 0.8
Ccdc90b-202ENSMUST00000085017 Brd4Q9ESU6 1400 aaKnown RBP20.01■□□□□ 0.79
Ccdc90b-202ENSMUST00000085017 Npm1Q61937 292 aaKnown RBP19.99■□□□□ 0.79
Ccdc90b-202ENSMUST00000085017 Esf1Q3V1V3 845 aaKnown RBP19.98■□□□□ 0.79
Ccdc90b-202ENSMUST00000085017 Fam163aQ8CAA5 168 aa19.95■□□□□ 0.78
Ccdc90b-202ENSMUST00000085017 Kcna4Q61423 654 aa19.94■□□□□ 0.78
Ccdc90b-202ENSMUST00000085017 Urb2E9Q7L1 1524 aaKnown RBP19.92■□□□□ 0.78
Ccdc90b-202ENSMUST00000085017 Top2bQ64511 1612 aa19.92■□□□□ 0.78
Ccdc90b-202ENSMUST00000085017 Ccdc136Q3TVA9 1136 aa19.91■□□□□ 0.78
Ccdc90b-202ENSMUST00000085017 Pelp1Q9DBD5 1123 aaKnown RBP19.91■□□□□ 0.78
Ccdc90b-202ENSMUST00000085017 Plb1Q3TTY0 1478 aa19.88■□□□□ 0.77
Ccdc90b-202ENSMUST00000085017 Pcdh10E9PXQ7 1057 aa19.85■□□□□ 0.77
Ccdc90b-202ENSMUST00000085017 Lamc3Q9R0B6 1581 aa19.84■□□□□ 0.77
Ccdc90b-202ENSMUST00000085017 Cep164Q5DU05 1446 aa19.81■□□□□ 0.76
Ccdc90b-202ENSMUST00000085017 Dhx29Q6PGC1 1365 aaKnown RBP19.78■□□□□ 0.76
Ccdc90b-202ENSMUST00000085017 Il27Q8K3I6 234 aa19.73■□□□□ 0.75
Ccdc90b-202ENSMUST00000085017 Zcchc11B2RX14 1644 aaKnown RBP19.69■□□□□ 0.74
Ccdc90b-202ENSMUST00000085017 Rusc2Q80U22 1514 aa19.64■□□□□ 0.74
Ccdc90b-202ENSMUST00000085017 Crocc2F6XLV1 1638 aa19.61■□□□□ 0.73
Ccdc90b-202ENSMUST00000085017 LrpprcQ6PB66 1392 aaKnown RBP19.61■□□□□ 0.73
Ccdc90b-202ENSMUST00000085017 Rtl1Q7M732 1744 aa19.59■□□□□ 0.73
Ccdc90b-202ENSMUST00000085017 Ift140E9PY46 1464 aa19.55■□□□□ 0.72
Ccdc90b-202ENSMUST00000085017 Arhgef5E9Q7D5 1581 aa19.53■□□□□ 0.72
Ccdc90b-202ENSMUST00000085017 Ccdc18Q640L5 1455 aa19.52■□□□□ 0.72
Ccdc90b-202ENSMUST00000085017 Ttbk1Q6PCN3 1308 aa19.51■□□□□ 0.71
Ccdc90b-202ENSMUST00000085017 Adgrl3Q80TS3 1537 aa19.5■□□□□ 0.71
Ccdc90b-202ENSMUST00000085017 Camsap1A2AHC3 1581 aa19.43■□□□□ 0.7
Ccdc90b-202ENSMUST00000085017 PogzQ8BZH4 1409 aaKnown RBP19.43■□□□□ 0.7
Ccdc90b-202ENSMUST00000085017 TnnQ80Z71 1560 aa19.41■□□□□ 0.7
Ccdc90b-202ENSMUST00000085017 Disp1Q3TDN0 1521 aa19.4■□□□□ 0.7
Ccdc90b-202ENSMUST00000085017 Gm156Q58A37 223 aa19.4■□□□□ 0.7
Ccdc90b-202ENSMUST00000085017 PtprkP35822 1457 aa19.37■□□□□ 0.69
Ccdc90b-202ENSMUST00000085017 PtprtQ99M80 1454 aa19.36■□□□□ 0.69
Ccdc90b-202ENSMUST00000085017 Cep170Q6A065 1588 aa19.33■□□□□ 0.69
Ccdc90b-202ENSMUST00000085017 Duox2A2AQ99 1517 aa19.33■□□□□ 0.69
Ccdc90b-202ENSMUST00000085017 Gapvd1Q6PAR5 1458 aa19.3■□□□□ 0.68
Ccdc90b-202ENSMUST00000085017 Nup160Q9Z0W3 1402 aaKnown RBP19.28■□□□□ 0.68
Ccdc90b-202ENSMUST00000085017 Golga3P55937 1487 aa19.26■□□□□ 0.67
Ccdc90b-202ENSMUST00000085017 Cc2d2bA0A286YDU8 1405 aa19.25■□□□□ 0.67
Ccdc90b-202ENSMUST00000085017 Setd1bQ8CFT2 1985 aa19.24■□□□□ 0.67
Ccdc90b-202ENSMUST00000085017 Fgd6Q69ZL1 1399 aa19.2■□□□□ 0.66
Ccdc90b-202ENSMUST00000085017 Samd9lQ69Z37 1561 aa19.19■□□□□ 0.66
Ccdc90b-202ENSMUST00000085017 Pprc1Q6NZN1 1644 aa19.17■□□□□ 0.66
Ccdc90b-202ENSMUST00000085017 Cngb1E1AZ71 1325 aa19.16■□□□□ 0.66
Ccdc90b-202ENSMUST00000085017 Hoxd11P23813 323 aa19.16■□□□□ 0.66
Ccdc90b-202ENSMUST00000085017 Rad54l2Q99NG0 1466 aa19.14■□□□□ 0.66
Ccdc90b-202ENSMUST00000085017 Grin2bQ01097 1482 aa19.12■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms