RNA–Protein interactions for RNA: ENSMUST00000076372.4

Sf3b4-201, Transcript of Splicing factor 3B subunit 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b4-201ENSMUST00000076372 Cux1P53564 1515 aa24.19■■□□□ 1.46
Sf3b4-201ENSMUST00000076372 EprsQ8CGC7 1512 aaKnown RBP24.19■■□□□ 1.46
Sf3b4-201ENSMUST00000076372 Cc2d2bA0A286YDU8 1405 aa24.18■■□□□ 1.46
Sf3b4-201ENSMUST00000076372 Setd5Q5XJV7 1441 aa24.18■■□□□ 1.46
Sf3b4-201ENSMUST00000076372 Eea1Q8BL66 1411 aa24.17■■□□□ 1.46
Sf3b4-201ENSMUST00000076372 Rusc2Q80U22 1514 aa24.16■■□□□ 1.46
Sf3b4-201ENSMUST00000076372 Ankrd26Q811D2 1581 aa24.14■■□□□ 1.45
Sf3b4-201ENSMUST00000076372 Ap3b1Q9Z1T1 1105 aa24.13■■□□□ 1.45
Sf3b4-201ENSMUST00000076372 Polr1aO35134 1717 aaKnown RBP24.09■■□□□ 1.45
Sf3b4-201ENSMUST00000076372 Arap1Q4LDD4 1452 aa24.08■■□□□ 1.45
Sf3b4-201ENSMUST00000076372 Gpatch8A2A6A1 1505 aa24.07■■□□□ 1.44
Sf3b4-201ENSMUST00000076372 CadpsQ80TJ1 1355 aa24.07■■□□□ 1.44
Sf3b4-201ENSMUST00000076372 Fyco1Q8VDC1 1437 aa24.07■■□□□ 1.44
Sf3b4-201ENSMUST00000076372 Rpap1Q80TE0 1409 aa24.06■■□□□ 1.44
Sf3b4-201ENSMUST00000076372 WizO88286 1684 aaKnown RBP24.05■■□□□ 1.44
Sf3b4-201ENSMUST00000076372 Adamts12Q811B3 1600 aa24.04■■□□□ 1.44
Sf3b4-201ENSMUST00000076372 PxdnQ3UQ28 1475 aa24.03■■□□□ 1.44
Sf3b4-201ENSMUST00000076372 Gm7298A0A0N4SVU1 1476 aa24.02■■□□□ 1.44
Sf3b4-201ENSMUST00000076372 Erich3F6QRE9 1637 aa24■■□□□ 1.43
Sf3b4-201ENSMUST00000076372 TchhA0A0B4J1F9 1599 aa23.99■■□□□ 1.43
Sf3b4-201ENSMUST00000076372 Plekhg3Q4VAC9 1341 aa23.97■■□□□ 1.43
Sf3b4-201ENSMUST00000076372 Arhgap27A2AB59 869 aa23.97■■□□□ 1.43
Sf3b4-201ENSMUST00000076372 Abca16E9PWJ7 1678 aa23.96■■□□□ 1.43
Sf3b4-201ENSMUST00000076372 Arhgef5E9Q7D5 1581 aa23.95■■□□□ 1.42
Sf3b4-201ENSMUST00000076372 Aebp1Q640N1 1128 aa23.94■■□□□ 1.42
Sf3b4-201ENSMUST00000076372 Pcf11G3X9Z4 1553 aa23.92■■□□□ 1.42
Sf3b4-201ENSMUST00000076372 Soga1E1U8D0 1418 aa23.92■■□□□ 1.42
Sf3b4-201ENSMUST00000076372 Abca5Q8K448 1642 aa23.91■■□□□ 1.42
Sf3b4-201ENSMUST00000076372 Abcc2Q8VI47 1543 aa23.91■■□□□ 1.42
Sf3b4-201ENSMUST00000076372 Lmo7E9PYF4 1699 aaKnown RBP23.9■■□□□ 1.42
Sf3b4-201ENSMUST00000076372 Fgd6Q69ZL1 1399 aa23.82■■□□□ 1.4
Sf3b4-201ENSMUST00000076372 Naip1Q9QWK5 1403 aa23.82■■□□□ 1.4
Sf3b4-201ENSMUST00000076372 BlmO88700 1416 aa23.81■■□□□ 1.4
Sf3b4-201ENSMUST00000076372 CntlnA2AM05 1397 aa23.81■■□□□ 1.4
Sf3b4-201ENSMUST00000076372 WrnO09053 1401 aa23.81■■□□□ 1.4
Sf3b4-201ENSMUST00000076372 Tiam1Q60610 1591 aa23.8■■□□□ 1.4
Sf3b4-201ENSMUST00000076372 UbtfP25976 765 aaKnown RBP23.79■■□□□ 1.4
Sf3b4-201ENSMUST00000076372 Shroom2A2ALU4 1481 aa23.78■■□□□ 1.4
Sf3b4-201ENSMUST00000076372 AknaQ80VW7 1404 aa23.76■■□□□ 1.39
Sf3b4-201ENSMUST00000076372 Lmod2Q3UHZ5 550 aa23.76■■□□□ 1.39
Sf3b4-201ENSMUST00000076372 Slx4Q6P1D7 1565 aa23.75■■□□□ 1.39
Sf3b4-201ENSMUST00000076372 Map3k4O08648 1597 aa23.74■■□□□ 1.39
Sf3b4-201ENSMUST00000076372 Dnmt1P13864 1620 aaKnown RBP23.73■■□□□ 1.39
Sf3b4-201ENSMUST00000076372 Neo1P97798 1493 aa23.71■■□□□ 1.39
Sf3b4-201ENSMUST00000076372 Kif27Q7M6Z4 1394 aa23.71■■□□□ 1.39
Sf3b4-201ENSMUST00000076372 BC005561E9Q5E2 1589 aa23.69■■□□□ 1.38
Sf3b4-201ENSMUST00000076372 Gm1043A0A140LJC2 1431 aa23.65■■□□□ 1.38
Sf3b4-201ENSMUST00000076372 Peg3Q3URU2 1571 aa23.62■■□□□ 1.37
Sf3b4-201ENSMUST00000076372 Jph4Q80WT0 628 aa23.61■■□□□ 1.37
Sf3b4-201ENSMUST00000076372 Pelp1Q9DBD5 1123 aaKnown RBP23.6■■□□□ 1.37
Sf3b4-201ENSMUST00000076372 Acin1Q9JIX8 1338 aaKnown RBP23.56■■□□□ 1.36
Sf3b4-201ENSMUST00000076372 Arhgap31A6X8Z5 1425 aa23.56■■□□□ 1.36
Sf3b4-201ENSMUST00000076372 Abcc1O35379 1528 aa23.56■■□□□ 1.36
Sf3b4-201ENSMUST00000076372 Arhgef12Q8R4H2 1543 aaKnown RBP23.55■■□□□ 1.36
Sf3b4-201ENSMUST00000076372 Fkbp15Q6P9Q6 1216 aaKnown RBP23.54■■□□□ 1.36
Sf3b4-201ENSMUST00000076372 Zcchc11B2RX14 1644 aaKnown RBP23.53■■□□□ 1.36
Sf3b4-201ENSMUST00000076372 Gm14025A2AP89 1413 aa23.53■■□□□ 1.36
Sf3b4-201ENSMUST00000076372 Pabpn1Q8CCS6 302 aaKnown RBP23.53■■□□□ 1.36
Sf3b4-201ENSMUST00000076372 Rapgef6Q5NCJ1 1609 aa23.52■■□□□ 1.36
Sf3b4-201ENSMUST00000076372 Mier1Q5UAK0 511 aa23.49■■□□□ 1.35
Sf3b4-201ENSMUST00000076372 Ncoa3O09000 1398 aa23.49■■□□□ 1.35
Sf3b4-201ENSMUST00000076372 Ccdc141E9Q8Q6 1531 aa23.45■■□□□ 1.34
Sf3b4-201ENSMUST00000076372 Mug1P28665 1476 aa23.44■■□□□ 1.34
Sf3b4-201ENSMUST00000076372 Ncoa2Q61026 1462 aa23.42■■□□□ 1.34
Sf3b4-201ENSMUST00000076372 Chd1P40201 1711 aa23.42■■□□□ 1.34
Sf3b4-201ENSMUST00000076372 Arhgef11Q68FM7 1552 aa23.41■■□□□ 1.34
Sf3b4-201ENSMUST00000076372 NexmifQ5DTT1 1515 aa23.4■■□□□ 1.34
Sf3b4-201ENSMUST00000076372 Rrbp1Q99PL5 1605 aaKnown RBP23.4■■□□□ 1.34
Sf3b4-201ENSMUST00000076372 Ccnb3Q810T2 1396 aa23.39■■□□□ 1.34
Sf3b4-201ENSMUST00000076372 Ythdc2B2RR83 1445 aaKnown RBP23.38■■□□□ 1.33
Sf3b4-201ENSMUST00000076372 Mroh2aD3Z750 1679 aa23.38■■□□□ 1.33
Sf3b4-201ENSMUST00000076372 Lmtk2Q3TYD6 1471 aa23.37■■□□□ 1.33
Sf3b4-201ENSMUST00000076372 Magi1Q6RHR9 1471 aa23.37■■□□□ 1.33
Sf3b4-201ENSMUST00000076372 Ncapd3Q6ZQK0 1506 aa23.37■■□□□ 1.33
Sf3b4-201ENSMUST00000076372 3425401B19RikD3Z1D3 1412 aa23.34■■□□□ 1.33
Sf3b4-201ENSMUST00000076372 Gapvd1Q6PAR5 1458 aa23.34■■□□□ 1.33
Sf3b4-201ENSMUST00000076372 Fam163aQ8CAA5 168 aa23.31■■□□□ 1.32
Sf3b4-201ENSMUST00000076372 PtprtQ99M80 1454 aa23.3■■□□□ 1.32
Sf3b4-201ENSMUST00000076372 Kiaa1551Q5DTW7 1521 aa23.29■■□□□ 1.32
Sf3b4-201ENSMUST00000076372 Dhx57Q6P5D3 1388 aaKnown RBP23.29■■□□□ 1.32
Sf3b4-201ENSMUST00000076372 Kdm5bQ80Y84 1544 aa23.29■■□□□ 1.32
Sf3b4-201ENSMUST00000076372 Prex2Q3LAC4 1598 aa23.27■■□□□ 1.32
Sf3b4-201ENSMUST00000076372 Fancd2Q80V62 1450 aa23.26■■□□□ 1.31
Sf3b4-201ENSMUST00000076372 Cdc42bpaQ3UU96 1719 aa23.25■■□□□ 1.31
Sf3b4-201ENSMUST00000076372 Ifnlr1Q8CGK5 535 aa23.25■■□□□ 1.31
Sf3b4-201ENSMUST00000076372 Rpgrip1Q9EPQ2 1331 aa23.24■■□□□ 1.31
Sf3b4-201ENSMUST00000076372 Mapkbp1Q6NS57 1503 aa23.23■■□□□ 1.31
Sf3b4-201ENSMUST00000076372 Cep170Q6A065 1588 aa23.22■■□□□ 1.31
Sf3b4-201ENSMUST00000076372 Fam50aQ9WV03 339 aaKnown RBP23.21■■□□□ 1.31
Sf3b4-201ENSMUST00000076372 Gcc2Q8CHG3 1679 aa23.2■■□□□ 1.3
Sf3b4-201ENSMUST00000076372 A2mQ6GQT1 1474 aa23.16■■□□□ 1.3
Sf3b4-201ENSMUST00000076372 Cul7Q8VE73 1689 aa23.16■■□□□ 1.3
Sf3b4-201ENSMUST00000076372 Arhgef40Q3UPH7 1517 aa23.16■■□□□ 1.3
Sf3b4-201ENSMUST00000076372 NhsB1AV60 1647 aa23.16■■□□□ 1.3
Sf3b4-201ENSMUST00000076372 Gm156Q58A37 223 aa23.16■■□□□ 1.3
Sf3b4-201ENSMUST00000076372 Igf1rQ60751 1373 aa23.15■■□□□ 1.3
Sf3b4-201ENSMUST00000076372 Adcy10Q8C0T9 1614 aa23.12■■□□□ 1.29
Sf3b4-201ENSMUST00000076372 Znf608Q56A10 1511 aa23.11■■□□□ 1.29
Sf3b4-201ENSMUST00000076372 Atp10dQ8K2X1 1416 aa23.11■■□□□ 1.29
Sf3b4-201ENSMUST00000076372 AI481877A2ALV5 1481 aa23.11■■□□□ 1.29
Retrieved 100 of 22,080 RNA–protein pairs in 143.5 ms