RNA–Protein interactions for RNA: ENSMUST00000076372.4

Sf3b4-201, Transcript of Splicing factor 3B subunit 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b4-201ENSMUST00000076372 NischQ80TM9 1593 aa32.68■■■□□ 2.82
Sf3b4-201ENSMUST00000076372 Gm35339A0A140LHH9 1649 aa32.58■■■□□ 2.81
Sf3b4-201ENSMUST00000076372 Abcc9P70170 1546 aa31.67■■■□□ 2.66
Sf3b4-201ENSMUST00000076372 Abcc8B2RUS7 1588 aa31.35■■■□□ 2.61
Sf3b4-201ENSMUST00000076372 ScribQ80U72 1612 aa29.74■■■□□ 2.35
Sf3b4-201ENSMUST00000076372 Rhox8Q6VSS7 320 aa29.26■■■□□ 2.27
Sf3b4-201ENSMUST00000076372 Dcaf1Q80TR8 1506 aa28.99■■■□□ 2.23
Sf3b4-201ENSMUST00000076372 Kdm5dQ62240 1548 aa28.97■■■□□ 2.23
Sf3b4-201ENSMUST00000076372 NacadQ5SWP3 1504 aa28.88■■■□□ 2.21
Sf3b4-201ENSMUST00000076372 Rb1cc1Q9ESK9 1588 aa28.54■■■□□ 2.16
Sf3b4-201ENSMUST00000076372 Sycp2Q9CUU3 1500 aa28.3■■■□□ 2.12
Sf3b4-201ENSMUST00000076372 Baz1aO88379 1555 aa28.18■■■□□ 2.1
Sf3b4-201ENSMUST00000076372 Ccdc180J3QNE4 1664 aa28.08■■■□□ 2.09
Sf3b4-201ENSMUST00000076372 Crybg2B7ZCC2 1516 aa27.87■■■□□ 2.05
Sf3b4-201ENSMUST00000076372 BicraF8VPZ9 1578 aa27.8■■■□□ 2.04
Sf3b4-201ENSMUST00000076372 Zcchc6Q5BLK4 1491 aaKnown RBP27.74■■■□□ 2.03
Sf3b4-201ENSMUST00000076372 Rtl1Q7M732 1744 aa27.64■■■□□ 2.02
Sf3b4-201ENSMUST00000076372 Smarca2Q6DIC0 1577 aa27.44■■□□□ 1.98
Sf3b4-201ENSMUST00000076372 Ccdc136Q3TVA9 1136 aa27.28■■□□□ 1.96
Sf3b4-201ENSMUST00000076372 Cecr2E9Q2Z1 1453 aa27.14■■□□□ 1.94
Sf3b4-201ENSMUST00000076372 Smarca4Q3TKT4 1613 aaKnown RBP26.82■■□□□ 1.88
Sf3b4-201ENSMUST00000076372 Pds5bQ4VA53 1446 aaKnown RBP26.81■■□□□ 1.88
Sf3b4-201ENSMUST00000076372 Trim41Q5NCC3 630 aa26.75■■□□□ 1.87
Sf3b4-201ENSMUST00000076372 Brd4Q9ESU6 1400 aaKnown RBP26.74■■□□□ 1.87
Sf3b4-201ENSMUST00000076372 Atad2bE9Q166 1460 aaKnown RBP26.74■■□□□ 1.87
Sf3b4-201ENSMUST00000076372 Synj1Q8CHC4 1574 aa26.64■■□□□ 1.86
Sf3b4-201ENSMUST00000076372 CftrP26361 1476 aa26.61■■□□□ 1.85
Sf3b4-201ENSMUST00000076372 Iqgap2Q3UQ44 1575 aa26.58■■□□□ 1.85
Sf3b4-201ENSMUST00000076372 Cttnbp2B9EJA2 1648 aa26.46■■□□□ 1.83
Sf3b4-201ENSMUST00000076372 Esf1Q3V1V3 845 aaKnown RBP26.33■■□□□ 1.81
Sf3b4-201ENSMUST00000076372 Ercc6F8VPZ5 1481 aa26.27■■□□□ 1.8
Sf3b4-201ENSMUST00000076372 Thoc2B1AZI6 1594 aaKnown RBP26.24■■□□□ 1.79
Sf3b4-201ENSMUST00000076372 Frmpd1A2AKB4 1549 aa26.24■■□□□ 1.79
Sf3b4-201ENSMUST00000076372 Wdr62Q3U3T8 1523 aa26.22■■□□□ 1.79
Sf3b4-201ENSMUST00000076372 Cngb1E1AZ71 1325 aa26.17■■□□□ 1.78
Sf3b4-201ENSMUST00000076372 Golga3P55937 1487 aa26.12■■□□□ 1.77
Sf3b4-201ENSMUST00000076372 Dnajc5bQ9CQ94 199 aa26.03■■□□□ 1.76
Sf3b4-201ENSMUST00000076372 HrcG5E8J6 738 aa25.96■■□□□ 1.75
Sf3b4-201ENSMUST00000076372 Top2bQ64511 1612 aa25.93■■□□□ 1.74
Sf3b4-201ENSMUST00000076372 Cc2d2aQ8CFW7 1633 aa25.93■■□□□ 1.74
Sf3b4-201ENSMUST00000076372 Phldb1Q6PDH0 1371 aaKnown RBP25.88■■□□□ 1.73
Sf3b4-201ENSMUST00000076372 Unc13aQ4KUS2 1712 aa25.82■■□□□ 1.72
Sf3b4-201ENSMUST00000076372 Fam135aQ6NS59 1506 aa25.81■■□□□ 1.72
Sf3b4-201ENSMUST00000076372 Rsf1E9PWW9 1441 aaKnown RBP25.78■■□□□ 1.72
Sf3b4-201ENSMUST00000076372 Chic1Q8CBW7 227 aa25.74■■□□□ 1.71
Sf3b4-201ENSMUST00000076372 Ccdc88bQ4QRL3 1481 aa25.74■■□□□ 1.71
Sf3b4-201ENSMUST00000076372 Ubl4bQ9CQ84 188 aa25.72■■□□□ 1.71
Sf3b4-201ENSMUST00000076372 Fmn1Q05860 1466 aa25.63■■□□□ 1.69
Sf3b4-201ENSMUST00000076372 Kif15Q6P9L6 1387 aa25.62■■□□□ 1.69
Sf3b4-201ENSMUST00000076372 Lamc3Q9R0B6 1581 aa25.58■■□□□ 1.69
Sf3b4-201ENSMUST00000076372 Cep164Q5DU05 1446 aa25.55■■□□□ 1.68
Sf3b4-201ENSMUST00000076372 TnnQ80Z71 1560 aa25.52■■□□□ 1.68
Sf3b4-201ENSMUST00000076372 Cux2P70298 1426 aa25.41■■□□□ 1.66
Sf3b4-201ENSMUST00000076372 Baz1bQ9Z277 1479 aa25.36■■□□□ 1.65
Sf3b4-201ENSMUST00000076372 Il27Q8K3I6 234 aa25.35■■□□□ 1.65
Sf3b4-201ENSMUST00000076372 Top2aQ01320 1528 aaKnown RBP25.31■■□□□ 1.64
Sf3b4-201ENSMUST00000076372 Gab3Q8BSM5 595 aa25.3■■□□□ 1.64
Sf3b4-201ENSMUST00000076372 Mrc2Q64449 1479 aa25.27■■□□□ 1.64
Sf3b4-201ENSMUST00000076372 Camsap1A2AHC3 1581 aa25.24■■□□□ 1.63
Sf3b4-201ENSMUST00000076372 Npm1Q61937 292 aaKnown RBP25.24■■□□□ 1.63
Sf3b4-201ENSMUST00000076372 Ccdc18Q640L5 1455 aa25.23■■□□□ 1.63
Sf3b4-201ENSMUST00000076372 LrpprcQ6PB66 1392 aaKnown RBP25.02■■□□□ 1.6
Sf3b4-201ENSMUST00000076372 Grin2bQ01097 1482 aa25.01■■□□□ 1.59
Sf3b4-201ENSMUST00000076372 Kif21aQ9QXL2 1672 aa24.96■■□□□ 1.59
Sf3b4-201ENSMUST00000076372 PtprkP35822 1457 aa24.94■■□□□ 1.58
Sf3b4-201ENSMUST00000076372 Dhx29Q6PGC1 1365 aaKnown RBP24.93■■□□□ 1.58
Sf3b4-201ENSMUST00000076372 Rapgef2Q8CHG7 1496 aa24.93■■□□□ 1.58
Sf3b4-201ENSMUST00000076372 PogzQ8BZH4 1409 aaKnown RBP24.92■■□□□ 1.58
Sf3b4-201ENSMUST00000076372 NrkQ9R0G8 1455 aa24.91■■□□□ 1.58
Sf3b4-201ENSMUST00000076372 Npm2Q80W85 207 aa24.91■■□□□ 1.58
Sf3b4-201ENSMUST00000076372 Shroom4Q1W617 1475 aa24.85■■□□□ 1.57
Sf3b4-201ENSMUST00000076372 Duox2A2AQ99 1517 aa24.84■■□□□ 1.57
Sf3b4-201ENSMUST00000076372 Efcab5A0JP43 1406 aa24.78■■□□□ 1.56
Sf3b4-201ENSMUST00000076372 Cep162Q6ZQ06 1403 aa24.77■■□□□ 1.56
Sf3b4-201ENSMUST00000076372 Crocc2F6XLV1 1638 aa24.74■■□□□ 1.55
Sf3b4-201ENSMUST00000076372 Plb1Q3TTY0 1478 aa24.69■■□□□ 1.54
Sf3b4-201ENSMUST00000076372 Myt1lP97500 1187 aa24.68■■□□□ 1.54
Sf3b4-201ENSMUST00000076372 Zeb1Q64318 1117 aa24.66■■□□□ 1.54
Sf3b4-201ENSMUST00000076372 Arhgap35Q91YM2 1499 aa24.65■■□□□ 1.54
Sf3b4-201ENSMUST00000076372 Urb2E9Q7L1 1524 aaKnown RBP24.65■■□□□ 1.54
Sf3b4-201ENSMUST00000076372 Samd9lQ69Z37 1561 aa24.64■■□□□ 1.54
Sf3b4-201ENSMUST00000076372 Lrriq1Q0P5X1 1673 aa24.64■■□□□ 1.53
Sf3b4-201ENSMUST00000076372 Eif4g1Q6NZJ6 1600 aaKnown RBP24.63■■□□□ 1.53
Sf3b4-201ENSMUST00000076372 Mroh2bQ7M6Y6 1581 aa24.57■■□□□ 1.52
Sf3b4-201ENSMUST00000076372 Rad54l2Q99NG0 1466 aa24.54■■□□□ 1.52
Sf3b4-201ENSMUST00000076372 Map3k1P53349 1493 aa24.5■■□□□ 1.51
Sf3b4-201ENSMUST00000076372 Disp1Q3TDN0 1521 aa24.46■■□□□ 1.51
Sf3b4-201ENSMUST00000076372 SynmQ70IV5 1561 aa24.46■■□□□ 1.51
Sf3b4-201ENSMUST00000076372 Ift140E9PY46 1464 aa24.44■■□□□ 1.5
Sf3b4-201ENSMUST00000076372 Ehmt2Q9Z148 1263 aaKnown RBP24.43■■□□□ 1.5
Sf3b4-201ENSMUST00000076372 Clip1Q922J3 1391 aa24.41■■□□□ 1.5
Sf3b4-201ENSMUST00000076372 Magi3Q9EQJ9 1476 aa24.37■■□□□ 1.49
Sf3b4-201ENSMUST00000076372 Carmil1Q6EDY6 1374 aa24.36■■□□□ 1.49
Sf3b4-201ENSMUST00000076372 AqrQ8CFQ3 1481 aaKnown RBP24.36■■□□□ 1.49
Sf3b4-201ENSMUST00000076372 Grin2aP35436 1464 aa24.34■■□□□ 1.49
Sf3b4-201ENSMUST00000076372 Pla2r1Q62028 1487 aa24.33■■□□□ 1.48
Sf3b4-201ENSMUST00000076372 Nup160Q9Z0W3 1402 aaKnown RBP24.29■■□□□ 1.48
Sf3b4-201ENSMUST00000076372 Eif4g3Q80XI3 1579 aaKnown RBP24.25■■□□□ 1.47
Sf3b4-201ENSMUST00000076372 Setd1bQ8CFT2 1985 aa24.2■■□□□ 1.46
Sf3b4-201ENSMUST00000076372 Pbrm1Q8BSQ9 1634 aaKnown RBP24.2■■□□□ 1.46
Retrieved 100 of 22,080 RNA–protein pairs in 91.8 ms