RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Anp32aO35381 247 aa24.83■■□□□ 1.56
Scaf11-201ENSMUST00000047835 Eea1Q8BL66 1411 aa24.81■■□□□ 1.56
Scaf11-201ENSMUST00000047835 Mrs2Q5NCE8 434 aa24.77■■□□□ 1.56
Scaf11-201ENSMUST00000047835 Kdm2aP59997 1161 aa24.73■■□□□ 1.55
Scaf11-201ENSMUST00000047835 Grwd1Q810D6 446 aaKnown RBP24.71■■□□□ 1.55
Scaf11-201ENSMUST00000047835 Rrp7aQ9D1C9 280 aaKnown RBP24.68■■□□□ 1.54
Scaf11-201ENSMUST00000047835 Pds5bQ4VA53 1446 aaKnown RBP24.68■■□□□ 1.54
Scaf11-201ENSMUST00000047835 DiexfQ8BTT6 772 aaKnown RBP24.67■■□□□ 1.54
Scaf11-201ENSMUST00000047835 4930567H17RikQ3V0K5 233 aa24.65■■□□□ 1.54
Scaf11-201ENSMUST00000047835 Rtl5Q5DTT4 599 aa24.64■■□□□ 1.53
Scaf11-201ENSMUST00000047835 DaxxO35613 739 aa24.6■■□□□ 1.53
Scaf11-201ENSMUST00000047835 Trim26Q99PN3 545 aa24.59■■□□□ 1.53
Scaf11-201ENSMUST00000047835 Myt1Q8CFC2 1127 aa24.58■■□□□ 1.53
Scaf11-201ENSMUST00000047835 Mroh3A0A1D5RM54 893 aa24.58■■□□□ 1.52
Scaf11-201ENSMUST00000047835 Calr4Q3TQS0 420 aa24.56■■□□□ 1.52
Scaf11-201ENSMUST00000047835 Aebp2Q9Z248 504 aaKnown RBP24.55■■□□□ 1.52
Scaf11-201ENSMUST00000047835 Mtus2Q3UHD3 1353 aa24.55■■□□□ 1.52
Scaf11-201ENSMUST00000047835 Srpk2O54781 681 aaKnown RBP24.55■■□□□ 1.52
Scaf11-201ENSMUST00000047835 Ppp4r2Q0VGB7 417 aa24.53■■□□□ 1.52
Scaf11-201ENSMUST00000047835 IqubQ8CDK3 788 aa24.53■■□□□ 1.52
Scaf11-201ENSMUST00000047835 Stk24Q99KH8 431 aa24.52■■□□□ 1.52
Scaf11-201ENSMUST00000047835 Anks4bQ8K3X6 423 aa24.52■■□□□ 1.52
Scaf11-201ENSMUST00000047835 Ccdc88bQ4QRL3 1481 aa24.51■■□□□ 1.51
Scaf11-201ENSMUST00000047835 MyclP10166 368 aa24.5■■□□□ 1.51
Scaf11-201ENSMUST00000047835 Gm20521D3Z5F7 333 aa24.49■■□□□ 1.51
Scaf11-201ENSMUST00000047835 Irx6Q9ER75 438 aa24.48■■□□□ 1.51
Scaf11-201ENSMUST00000047835 Sycp2Q9CUU3 1500 aa24.47■■□□□ 1.51
Scaf11-201ENSMUST00000047835 Card11Q8CIS0 1159 aa24.47■■□□□ 1.51
Scaf11-201ENSMUST00000047835 Upf2A2AT37 1269 aaKnown RBP24.47■■□□□ 1.51
Scaf11-201ENSMUST00000047835 Ppp1r18Q8BQ30 594 aa24.41■■□□□ 1.5
Scaf11-201ENSMUST00000047835 Exosc9Q9JHI7 438 aaKnown RBP24.41■■□□□ 1.5
Scaf11-201ENSMUST00000047835 NgefQ8CHT1 710 aa24.39■■□□□ 1.5
Scaf11-201ENSMUST00000047835 AknaQ80VW7 1404 aa24.39■■□□□ 1.49
Scaf11-201ENSMUST00000047835 Kif27Q7M6Z4 1394 aa24.38■■□□□ 1.49
Scaf11-201ENSMUST00000047835 Arid3cA6PWV5 409 aa24.38■■□□□ 1.49
Scaf11-201ENSMUST00000047835 Fgd1P52734 960 aa24.38■■□□□ 1.49
Scaf11-201ENSMUST00000047835 Fmn1Q05860 1466 aa24.36■■□□□ 1.49
Scaf11-201ENSMUST00000047835 Rpap1Q80TE0 1409 aa24.33■■□□□ 1.49
Scaf11-201ENSMUST00000047835 Stag3O70576 1240 aa24.32■■□□□ 1.48
Scaf11-201ENSMUST00000047835 Cep162Q6ZQ06 1403 aa24.32■■□□□ 1.48
Scaf11-201ENSMUST00000047835 Aebp1Q640N1 1128 aa24.31■■□□□ 1.48
Scaf11-201ENSMUST00000047835 Cux2P70298 1426 aa24.29■■□□□ 1.48
Scaf11-201ENSMUST00000047835 Hspa5P20029 655 aaKnown RBP24.27■■□□□ 1.48
Scaf11-201ENSMUST00000047835 Cecr2E9Q2Z1 1453 aa24.26■■□□□ 1.47
Scaf11-201ENSMUST00000047835 Mia2Q91ZV0 1396 aa24.26■■□□□ 1.47
Scaf11-201ENSMUST00000047835 Cnga1P29974 684 aa24.26■■□□□ 1.47
Scaf11-201ENSMUST00000047835 Ofd1Q80Z25 1017 aa24.26■■□□□ 1.47
Scaf11-201ENSMUST00000047835 Wdr43Q6ZQL4 677 aaKnown RBP24.25■■□□□ 1.47
Scaf11-201ENSMUST00000047835 Neurod2Q62414 383 aa24.23■■□□□ 1.47
Scaf11-201ENSMUST00000047835 Apbb1Q9QXJ1 710 aa24.22■■□□□ 1.47
Scaf11-201ENSMUST00000047835 Cwc22Q8C5N3 908 aaKnown RBP24.22■■□□□ 1.47
Scaf11-201ENSMUST00000047835 Map4P27546 1125 aaKnown RBP24.21■■□□□ 1.47
Scaf11-201ENSMUST00000047835 CftrP26361 1476 aa24.19■■□□□ 1.46
Scaf11-201ENSMUST00000047835 Baz1bQ9Z277 1479 aa24.19■■□□□ 1.46
Scaf11-201ENSMUST00000047835 Pkd2O35245 966 aa24.12■■□□□ 1.45
Scaf11-201ENSMUST00000047835 Mapk8ip3Q9ESN9 1337 aa24.1■■□□□ 1.45
Scaf11-201ENSMUST00000047835 Phldb1Q6PDH0 1371 aaKnown RBP24.1■■□□□ 1.45
Scaf11-201ENSMUST00000047835 Cabp1Q9JLK7 227 aa24.1■■□□□ 1.45
Scaf11-201ENSMUST00000047835 Aplp2Q06335 707 aa24.09■■□□□ 1.45
Scaf11-201ENSMUST00000047835 Synj1Q8CHC4 1574 aa24.06■■□□□ 1.44
Scaf11-201ENSMUST00000047835 Trak1Q6PD31 939 aa24.05■■□□□ 1.44
Scaf11-201ENSMUST00000047835 Stk26Q99JT2 416 aa24.05■■□□□ 1.44
Scaf11-201ENSMUST00000047835 Lemd3Q9WU40 921 aa24.04■■□□□ 1.44
Scaf11-201ENSMUST00000047835 Ifit1bl1D3Z6F0 470 aa24.03■■□□□ 1.44
Scaf11-201ENSMUST00000047835 Rundc1Q0VDN7 615 aa24.03■■□□□ 1.44
Scaf11-201ENSMUST00000047835 Gm6268A2A3U9 297 aa24.02■■□□□ 1.44
Scaf11-201ENSMUST00000047835 Vsig10D3YX43 558 aa24.01■■□□□ 1.43
Scaf11-201ENSMUST00000047835 Trim30dE9PWL0 497 aa24.01■■□□□ 1.43
Scaf11-201ENSMUST00000047835 1700019A02RikA0A087WPV9 146 aa24■■□□□ 1.43
Scaf11-201ENSMUST00000047835 Fyco1Q8VDC1 1437 aa24■■□□□ 1.43
Scaf11-201ENSMUST00000047835 Crybg2B7ZCC2 1516 aa24■■□□□ 1.43
Scaf11-201ENSMUST00000047835 Atad2bE9Q166 1460 aaKnown RBP24■■□□□ 1.43
Scaf11-201ENSMUST00000047835 Ecm2Q5FW85 670 aa23.99■■□□□ 1.43
Scaf11-201ENSMUST00000047835 DekQ7TNV0 380 aaKnown RBP23.97■■□□□ 1.43
Scaf11-201ENSMUST00000047835 ScribQ80U72 1612 aa23.97■■□□□ 1.43
Scaf11-201ENSMUST00000047835 Rtn4Q99P72 1162 aaKnown RBP23.97■■□□□ 1.43
Scaf11-201ENSMUST00000047835 Wwc2Q6NXJ0 1187 aa23.97■■□□□ 1.43
Scaf11-201ENSMUST00000047835 Mphosph9A6H5Y1 991 aa23.96■■□□□ 1.43
Scaf11-201ENSMUST00000047835 CntlnA2AM05 1397 aa23.95■■□□□ 1.42
Scaf11-201ENSMUST00000047835 Sin3aQ60520 1274 aaKnown RBP23.94■■□□□ 1.42
Scaf11-201ENSMUST00000047835 Hsp90ab1P11499 724 aaKnown RBP23.94■■□□□ 1.42
Scaf11-201ENSMUST00000047835 Arid4bA2CG63 1314 aaKnown RBP23.93■■□□□ 1.42
Scaf11-201ENSMUST00000047835 Rapgef2Q8CHG7 1496 aa23.92■■□□□ 1.42
Scaf11-201ENSMUST00000047835 Smarca2Q6DIC0 1577 aa23.92■■□□□ 1.42
Scaf11-201ENSMUST00000047835 Smarca4Q3TKT4 1613 aaKnown RBP23.9■■□□□ 1.42
Scaf11-201ENSMUST00000047835 Arhgap35Q91YM2 1499 aa23.9■■□□□ 1.42
Scaf11-201ENSMUST00000047835 Gtf2e1Q9D0D5 440 aa23.89■■□□□ 1.42
Scaf11-201ENSMUST00000047835 Armcx1Q9CX83 456 aa23.89■■□□□ 1.42
Scaf11-201ENSMUST00000047835 Kif3bQ61771 747 aa23.89■■□□□ 1.41
Scaf11-201ENSMUST00000047835 MlecQ6ZQI3 291 aaKnown RBP23.89■■□□□ 1.41
Scaf11-201ENSMUST00000047835 Carmil1Q6EDY6 1374 aa23.87■■□□□ 1.41
Scaf11-201ENSMUST00000047835 Iqcf3Q9D498 203 aa23.87■■□□□ 1.41
Scaf11-201ENSMUST00000047835 Hsp90aa1P07901 733 aaKnown RBP23.86■■□□□ 1.41
Scaf11-201ENSMUST00000047835 Plin1Q8CGN5 517 aa23.86■■□□□ 1.41
Scaf11-201ENSMUST00000047835 Psme1P97371 249 aa23.85■■□□□ 1.41
Scaf11-201ENSMUST00000047835 CanxP35564 591 aaKnown RBP23.85■■□□□ 1.41
Scaf11-201ENSMUST00000047835 Dbr1Q923B1 550 aa23.83■■□□□ 1.41
Scaf11-201ENSMUST00000047835 LrpprcQ6PB66 1392 aaKnown RBP23.82■■□□□ 1.4
Scaf11-201ENSMUST00000047835 Txndc2Q6P902 515 aa23.82■■□□□ 1.4
Scaf11-201ENSMUST00000047835 Nup155Q99P88 1391 aaKnown RBP23.81■■□□□ 1.4
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms