RNA–Protein interactions for RNA: ENSMUST00000043359.8

Smarca5-201, Transcript of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smarca5, Length 6,113 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca5-201ENSMUST00000043359 Stk24Q99KH8 431 aa19.63■□□□□ 0.73
Smarca5-201ENSMUST00000043359 Rtl1Q7M732 1744 aa19.62■□□□□ 0.73
Smarca5-201ENSMUST00000043359 Aplp2Q06335 707 aa19.61■□□□□ 0.73
Smarca5-201ENSMUST00000043359 IqubQ8CDK3 788 aa19.6■□□□□ 0.73
Smarca5-201ENSMUST00000043359 Ecm2Q5FW85 670 aa19.59■□□□□ 0.73
Smarca5-201ENSMUST00000043359 Vsig10D3YX43 558 aa19.58■□□□□ 0.73
Smarca5-201ENSMUST00000043359 Exosc9Q9JHI7 438 aaKnown RBP19.58■□□□□ 0.72
Smarca5-201ENSMUST00000043359 Hsp90aa1P07901 733 aaKnown RBP19.58■□□□□ 0.72
Smarca5-201ENSMUST00000043359 Arid3cA6PWV5 409 aa19.57■□□□□ 0.72
Smarca5-201ENSMUST00000043359 Kif15Q6P9L6 1387 aa19.57■□□□□ 0.72
Smarca5-201ENSMUST00000043359 Abcc8B2RUS7 1588 aa19.56■□□□□ 0.72
Smarca5-201ENSMUST00000043359 Grwd1Q810D6 446 aaKnown RBP19.56■□□□□ 0.72
Smarca5-201ENSMUST00000043359 Gm38655A0A286YDK6 273 aa19.55■□□□□ 0.72
Smarca5-201ENSMUST00000043359 Rrp7aQ9D1C9 280 aaKnown RBP19.54■□□□□ 0.72
Smarca5-201ENSMUST00000043359 Srpk2O54781 681 aaKnown RBP19.54■□□□□ 0.72
Smarca5-201ENSMUST00000043359 ClspnQ80YR7 1315 aa19.53■□□□□ 0.72
Smarca5-201ENSMUST00000043359 Gm20521D3Z5F7 333 aa19.48■□□□□ 0.71
Smarca5-201ENSMUST00000043359 1700019A02RikA0A087WPV9 146 aa19.47■□□□□ 0.71
Smarca5-201ENSMUST00000043359 Mroh3A0A1D5RM54 893 aa19.47■□□□□ 0.71
Smarca5-201ENSMUST00000043359 Arid4bA2CG63 1314 aaKnown RBP19.47■□□□□ 0.71
Smarca5-201ENSMUST00000043359 Cnga1P29974 684 aa19.44■□□□□ 0.7
Smarca5-201ENSMUST00000043359 Ppm1fQ8CGA0 452 aa19.43■□□□□ 0.7
Smarca5-201ENSMUST00000043359 Stag3O70576 1240 aa19.42■□□□□ 0.7
Smarca5-201ENSMUST00000043359 Ercc6F8VPZ5 1481 aa19.42■□□□□ 0.7
Smarca5-201ENSMUST00000043359 Mrs2Q5NCE8 434 aa19.4■□□□□ 0.7
Smarca5-201ENSMUST00000043359 Setd5Q5XJV7 1441 aa19.38■□□□□ 0.69
Smarca5-201ENSMUST00000043359 Ccer2J3QPU5 274 aa19.37■□□□□ 0.69
Smarca5-201ENSMUST00000043359 DekQ7TNV0 380 aaKnown RBP19.36■□□□□ 0.69
Smarca5-201ENSMUST00000043359 Plin1Q8CGN5 517 aa19.35■□□□□ 0.69
Smarca5-201ENSMUST00000043359 CatipB9EKE5 520 aa19.35■□□□□ 0.69
Smarca5-201ENSMUST00000043359 Sox12Q04890 314 aa19.35■□□□□ 0.69
Smarca5-201ENSMUST00000043359 Apbb1Q9QXJ1 710 aa19.35■□□□□ 0.69
Smarca5-201ENSMUST00000043359 Rsf1E9PWW9 1441 aaKnown RBP19.32■□□□□ 0.68
Smarca5-201ENSMUST00000043359 Neurod2Q62414 383 aa19.31■□□□□ 0.68
Smarca5-201ENSMUST00000043359 Gm6268A2A3U9 297 aa19.31■□□□□ 0.68
Smarca5-201ENSMUST00000043359 Stk26Q99JT2 416 aa19.3■□□□□ 0.68
Smarca5-201ENSMUST00000043359 AknaQ80VW7 1404 aa19.3■□□□□ 0.68
Smarca5-201ENSMUST00000043359 Anp32aO35381 247 aa19.28■□□□□ 0.68
Smarca5-201ENSMUST00000043359 Upf2A2AT37 1269 aaKnown RBP19.28■□□□□ 0.68
Smarca5-201ENSMUST00000043359 Rb1cc1Q9ESK9 1588 aa19.25■□□□□ 0.67
Smarca5-201ENSMUST00000043359 Myt1Q8CFC2 1127 aa19.24■□□□□ 0.67
Smarca5-201ENSMUST00000043359 Ppp4r2Q0VGB7 417 aa19.24■□□□□ 0.67
Smarca5-201ENSMUST00000043359 Mapk8ip3Q9ESN9 1337 aa19.22■□□□□ 0.67
Smarca5-201ENSMUST00000043359 Ccdc18Q640L5 1455 aa19.19■□□□□ 0.66
Smarca5-201ENSMUST00000043359 Znf316Q6PGE4 1016 aa19.19■□□□□ 0.66
Smarca5-201ENSMUST00000043359 Psme1P97371 249 aa19.19■□□□□ 0.66
Smarca5-201ENSMUST00000043359 Cep164Q5DU05 1446 aa19.19■□□□□ 0.66
Smarca5-201ENSMUST00000043359 Txndc2Q6P902 515 aa19.18■□□□□ 0.66
Smarca5-201ENSMUST00000043359 Bcl11bQ99PV8 884 aa19.17■□□□□ 0.66
Smarca5-201ENSMUST00000043359 Lmod3E9QA62 571 aa19.16■□□□□ 0.66
Smarca5-201ENSMUST00000043359 Card11Q8CIS0 1159 aa19.16■□□□□ 0.66
Smarca5-201ENSMUST00000043359 Armcx1Q9CX83 456 aa19.13■□□□□ 0.65
Smarca5-201ENSMUST00000043359 Tnnt1O88346 262 aa19.12■□□□□ 0.65
Smarca5-201ENSMUST00000043359 Senp3Q9EP97 568 aaKnown RBP19.12■□□□□ 0.65
Smarca5-201ENSMUST00000043359 Sall2Q9QX96 1004 aa19.12■□□□□ 0.65
Smarca5-201ENSMUST00000043359 Chrna2Q91X60 512 aa19.11■□□□□ 0.65
Smarca5-201ENSMUST00000043359 Mtus2Q3UHD3 1353 aa19.11■□□□□ 0.65
Smarca5-201ENSMUST00000043359 Pes1Q9EQ61 584 aaKnown RBP19.1■□□□□ 0.65
Smarca5-201ENSMUST00000043359 Ciz1Q8VEH2 845 aa19.09■□□□□ 0.65
Smarca5-201ENSMUST00000043359 Trim30dE9PWL0 497 aa19.08■□□□□ 0.64
Smarca5-201ENSMUST00000043359 Calr4Q3TQS0 420 aa19.07■□□□□ 0.64
Smarca5-201ENSMUST00000043359 Rtl5Q5DTT4 599 aa19.07■□□□□ 0.64
Smarca5-201ENSMUST00000043359 Iqcf3Q9D498 203 aa19.05■□□□□ 0.64
Smarca5-201ENSMUST00000043359 U2surpQ6NV83 1029 aaKnown RBP19.04■□□□□ 0.64
Smarca5-201ENSMUST00000043359 Sh3bp5Q9Z131 463 aa19.02■□□□□ 0.63
Smarca5-201ENSMUST00000043359 Pip4k2bQ80XI4 416 aa19.01■□□□□ 0.63
Smarca5-201ENSMUST00000043359 Birc3O08863 600 aa19■□□□□ 0.63
Smarca5-201ENSMUST00000043359 Hsp90ab1P11499 724 aaKnown RBP18.99■□□□□ 0.63
Smarca5-201ENSMUST00000043359 Lemd3Q9WU40 921 aa18.98■□□□□ 0.63
Smarca5-201ENSMUST00000043359 Pak3Q61036 559 aa18.98■□□□□ 0.63
Smarca5-201ENSMUST00000043359 Rtf1A2AQ19 715 aaKnown RBP18.97■□□□□ 0.63
Smarca5-201ENSMUST00000043359 PnnO35691 725 aaKnown RBP18.97■□□□□ 0.63
Smarca5-201ENSMUST00000043359 HdgfP51859 237 aaKnown RBP18.96■□□□□ 0.63
Smarca5-201ENSMUST00000043359 Dcaf1Q80TR8 1506 aa18.96■□□□□ 0.63
Smarca5-201ENSMUST00000043359 Ofd1Q80Z25 1017 aa18.95■□□□□ 0.62
Smarca5-201ENSMUST00000043359 Eif4g2Q62448 906 aaKnown RBP18.94■□□□□ 0.62
Smarca5-201ENSMUST00000043359 NacadQ5SWP3 1504 aa18.93■□□□□ 0.62
Smarca5-201ENSMUST00000043359 Hsp90b1P08113 802 aaKnown RBP18.92■□□□□ 0.62
Smarca5-201ENSMUST00000043359 Rassf8Q8CJ96 419 aa18.92■□□□□ 0.62
Smarca5-201ENSMUST00000043359 Dbr1Q923B1 550 aa18.9■□□□□ 0.62
Smarca5-201ENSMUST00000043359 Nol10Q5RJG1 687 aaKnown RBP18.9■□□□□ 0.62
Smarca5-201ENSMUST00000043359 Map4P27546 1125 aaKnown RBP18.89■□□□□ 0.61
Smarca5-201ENSMUST00000043359 Ifit1bl1D3Z6F0 470 aa18.88■□□□□ 0.61
Smarca5-201ENSMUST00000043359 Rpap1Q80TE0 1409 aa18.87■□□□□ 0.61
Smarca5-201ENSMUST00000043359 Pibf1E9Q6K3 756 aa18.85■□□□□ 0.61
Smarca5-201ENSMUST00000043359 Kif3bQ61771 747 aa18.85■□□□□ 0.61
Smarca5-201ENSMUST00000043359 Anapc15P60007 132 aa18.84■□□□□ 0.61
Smarca5-201ENSMUST00000043359 Wdr43Q6ZQL4 677 aaKnown RBP18.84■□□□□ 0.61
Smarca5-201ENSMUST00000043359 Eea1Q8BL66 1411 aa18.83■□□□□ 0.6
Smarca5-201ENSMUST00000043359 Q3TQI7 289 aaKnown RBP18.82■□□□□ 0.6
Smarca5-201ENSMUST00000043359 PtmaP26350 111 aa18.82■□□□□ 0.6
Smarca5-201ENSMUST00000043359 Kif27Q7M6Z4 1394 aa18.81■□□□□ 0.6
Smarca5-201ENSMUST00000043359 CanxP35564 591 aaKnown RBP18.8■□□□□ 0.6
Smarca5-201ENSMUST00000043359 NudcO35685 332 aaKnown RBP18.8■□□□□ 0.6
Smarca5-201ENSMUST00000043359 Chmp3Q9CQ10 224 aa18.8■□□□□ 0.6
Smarca5-201ENSMUST00000043359 Gtf2e1Q9D0D5 440 aa18.78■□□□□ 0.6
Smarca5-201ENSMUST00000043359 Plcb2A3KGF7 1181 aa18.77■□□□□ 0.6
Smarca5-201ENSMUST00000043359 Pabpn1Q8CCS6 302 aaKnown RBP18.77■□□□□ 0.59
Smarca5-201ENSMUST00000043359 Zfp777B9EKF4 885 aa18.76■□□□□ 0.59
Smarca5-201ENSMUST00000043359 Tmco5bQ80X59 307 aa18.75■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms