RNA–Protein interactions for RNA: ENSMUST00000043359.8

Smarca5-201, Transcript of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smarca5, Length 6,113 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca5-201ENSMUST00000043359 Rhox8Q6VSS7 320 aa26.67■■□□□ 1.86
Smarca5-201ENSMUST00000043359 Esf1Q3V1V3 845 aaKnown RBP23.81■■□□□ 1.4
Smarca5-201ENSMUST00000043359 Ehmt2Q9Z148 1263 aaKnown RBP23.76■■□□□ 1.39
Smarca5-201ENSMUST00000043359 Ube2uB1AUC4 352 aa23.64■■□□□ 1.38
Smarca5-201ENSMUST00000043359 Cngb1E1AZ71 1325 aa23.63■■□□□ 1.37
Smarca5-201ENSMUST00000043359 Zeb1Q64318 1117 aa23.62■■□□□ 1.37
Smarca5-201ENSMUST00000043359 Ccdc136Q3TVA9 1136 aa23.6■■□□□ 1.37
Smarca5-201ENSMUST00000043359 Gab3Q8BSM5 595 aa23.23■■□□□ 1.31
Smarca5-201ENSMUST00000043359 Npm2Q80W85 207 aa23.2■■□□□ 1.3
Smarca5-201ENSMUST00000043359 Myt1lP97500 1187 aa23.04■■□□□ 1.28
Smarca5-201ENSMUST00000043359 Wdr66E9Q743 1299 aa22.96■■□□□ 1.27
Smarca5-201ENSMUST00000043359 Las1lA2BE28 776 aaKnown RBP22.65■■□□□ 1.22
Smarca5-201ENSMUST00000043359 Il27Q8K3I6 234 aa22.55■■□□□ 1.2
Smarca5-201ENSMUST00000043359 Trim41Q5NCC3 630 aa22.53■■□□□ 1.2
Smarca5-201ENSMUST00000043359 Rpgrip1Q9EPQ2 1331 aa22.17■■□□□ 1.14
Smarca5-201ENSMUST00000043359 UbtfP25976 765 aaKnown RBP22.11■■□□□ 1.13
Smarca5-201ENSMUST00000043359 Slc24a1Q91WD8 1130 aa22.1■■□□□ 1.13
Smarca5-201ENSMUST00000043359 Ap3b1Q9Z1T1 1105 aa21.96■■□□□ 1.11
Smarca5-201ENSMUST00000043359 Pelp1Q9DBD5 1123 aaKnown RBP21.92■■□□□ 1.1
Smarca5-201ENSMUST00000043359 Ifnlr1Q8CGK5 535 aa21.89■■□□□ 1.09
Smarca5-201ENSMUST00000043359 Os9Q8K2C7 672 aa21.87■■□□□ 1.09
Smarca5-201ENSMUST00000043359 Plppr3Q7TPB0 716 aa21.84■■□□□ 1.09
Smarca5-201ENSMUST00000043359 Neurod1Q60867 357 aa21.83■■□□□ 1.08
Smarca5-201ENSMUST00000043359 NischQ80TM9 1593 aa21.74■■□□□ 1.07
Smarca5-201ENSMUST00000043359 Zbtb7cQ8VCZ7 619 aa21.74■■□□□ 1.07
Smarca5-201ENSMUST00000043359 Gm35339A0A140LHH9 1649 aa21.73■■□□□ 1.07
Smarca5-201ENSMUST00000043359 Abcc9P70170 1546 aa21.7■■□□□ 1.06
Smarca5-201ENSMUST00000043359 Fam50aQ9WV03 339 aaKnown RBP21.67■■□□□ 1.06
Smarca5-201ENSMUST00000043359 Gm13697A2AK42 830 aa21.63■■□□□ 1.05
Smarca5-201ENSMUST00000043359 HrcG5E8J6 738 aa21.61■■□□□ 1.05
Smarca5-201ENSMUST00000043359 Chic1Q8CBW7 227 aa21.52■■□□□ 1.04
Smarca5-201ENSMUST00000043359 Amer1Q7TS75 1132 aa21.4■■□□□ 1.02
Smarca5-201ENSMUST00000043359 Hnrnpul2Q00PI9 745 aaKnown RBP21.38■■□□□ 1.01
Smarca5-201ENSMUST00000043359 Ttbk1Q6PCN3 1308 aa21.36■■□□□ 1.01
Smarca5-201ENSMUST00000043359 Zcchc6Q5BLK4 1491 aaKnown RBP21.31■■□□□ 1
Smarca5-201ENSMUST00000043359 Atp1b4Q99ME6 356 aa21.27■□□□□ 0.99
Smarca5-201ENSMUST00000043359 Npm1Q61937 292 aaKnown RBP21.25■□□□□ 0.99
Smarca5-201ENSMUST00000043359 Fkbp15Q6P9Q6 1216 aaKnown RBP21.24■□□□□ 0.99
Smarca5-201ENSMUST00000043359 Ppargc1bQ8VHJ7 1014 aa21.23■□□□□ 0.99
Smarca5-201ENSMUST00000043359 Zbtb4Q5F293 982 aa21.2■□□□□ 0.98
Smarca5-201ENSMUST00000043359 NclP09405 707 aaKnown RBP21.18■□□□□ 0.98
Smarca5-201ENSMUST00000043359 Lmod2Q3UHZ5 550 aa21.16■□□□□ 0.98
Smarca5-201ENSMUST00000043359 Erich6D3Z6S9 713 aa21.15■□□□□ 0.98
Smarca5-201ENSMUST00000043359 Gm13695A2AK44 830 aa21.15■□□□□ 0.98
Smarca5-201ENSMUST00000043359 Eif5bQ05D44 1216 aaKnown RBP21.15■□□□□ 0.98
Smarca5-201ENSMUST00000043359 Anp32bQ9EST5 272 aaKnown RBP21.15■□□□□ 0.98
Smarca5-201ENSMUST00000043359 Prdm10Q3UTQ7 1184 aa21.13■□□□□ 0.97
Smarca5-201ENSMUST00000043359 NrdcQ8BHG1 1161 aa21.12■□□□□ 0.97
Smarca5-201ENSMUST00000043359 Stra8P70278 393 aa21.08■□□□□ 0.97
Smarca5-201ENSMUST00000043359 NefmP08553 848 aa21.02■□□□□ 0.96
Smarca5-201ENSMUST00000043359 NeflP08551 543 aa20.86■□□□□ 0.93
Smarca5-201ENSMUST00000043359 Safb2Q80YR5 991 aaKnown RBP20.77■□□□□ 0.91
Smarca5-201ENSMUST00000043359 CenpbP27790 599 aa20.74■□□□□ 0.91
Smarca5-201ENSMUST00000043359 Plekhg3Q4VAC9 1341 aa20.71■□□□□ 0.91
Smarca5-201ENSMUST00000043359 DiexfQ8BTT6 772 aaKnown RBP20.67■□□□□ 0.9
Smarca5-201ENSMUST00000043359 Acin1Q9JIX8 1338 aaKnown RBP20.65■□□□□ 0.9
Smarca5-201ENSMUST00000043359 Polr3glQ8R0C0 218 aa20.63■□□□□ 0.89
Smarca5-201ENSMUST00000043359 4933416C03RikQ3V063 378 aa20.61■□□□□ 0.89
Smarca5-201ENSMUST00000043359 Ubl4bQ9CQ84 188 aa20.6■□□□□ 0.89
Smarca5-201ENSMUST00000043359 Rangap1P46061 589 aaKnown RBP20.57■□□□□ 0.88
Smarca5-201ENSMUST00000043359 Nlrp6Q91WS2 869 aa20.57■□□□□ 0.88
Smarca5-201ENSMUST00000043359 Cdk11bP24788 784 aaKnown RBP20.57■□□□□ 0.88
Smarca5-201ENSMUST00000043359 P3h3Q8CG70 732 aa20.48■□□□□ 0.87
Smarca5-201ENSMUST00000043359 TonslQ6NZL6 1363 aa20.47■□□□□ 0.87
Smarca5-201ENSMUST00000043359 Mapk8ip2Q9ERE9 830 aa20.44■□□□□ 0.86
Smarca5-201ENSMUST00000043359 4930567H17RikQ3V0K5 233 aa20.43■□□□□ 0.86
Smarca5-201ENSMUST00000043359 Nop58Q6DFW4 536 aaKnown RBP20.36■□□□□ 0.85
Smarca5-201ENSMUST00000043359 MyclP10166 368 aa20.33■□□□□ 0.85
Smarca5-201ENSMUST00000043359 ArxO35085 564 aa20.29■□□□□ 0.84
Smarca5-201ENSMUST00000043359 Eid3Q3V124 375 aa20.26■□□□□ 0.83
Smarca5-201ENSMUST00000043359 Mier1Q5UAK0 511 aa20.24■□□□□ 0.83
Smarca5-201ENSMUST00000043359 Irx6Q9ER75 438 aa20.23■□□□□ 0.83
Smarca5-201ENSMUST00000043359 Chic2Q9D9G3 165 aa20.19■□□□□ 0.82
Smarca5-201ENSMUST00000043359 Ccdc180J3QNE4 1664 aa20.16■□□□□ 0.82
Smarca5-201ENSMUST00000043359 Tnnt3Q9QZ47 272 aa20.08■□□□□ 0.8
Smarca5-201ENSMUST00000043359 Csrnp3P59055 597 aa20.03■□□□□ 0.8
Smarca5-201ENSMUST00000043359 NgefQ8CHT1 710 aa19.98■□□□□ 0.79
Smarca5-201ENSMUST00000043359 Hdac5Q9Z2V6 1113 aa19.98■□□□□ 0.79
Smarca5-201ENSMUST00000043359 Rad21Q61550 635 aaKnown RBP19.94■□□□□ 0.78
Smarca5-201ENSMUST00000043359 Rtn4Q99P72 1162 aaKnown RBP19.92■□□□□ 0.78
Smarca5-201ENSMUST00000043359 Clip1Q922J3 1391 aa19.91■□□□□ 0.78
Smarca5-201ENSMUST00000043359 Trim26Q99PN3 545 aa19.9■□□□□ 0.78
Smarca5-201ENSMUST00000043359 Supt5hO55201 1082 aaKnown RBP19.9■□□□□ 0.78
Smarca5-201ENSMUST00000043359 Pcgf6Q99NA9 353 aa19.88■□□□□ 0.77
Smarca5-201ENSMUST00000043359 Ythdc1E9Q5K9 736 aaKnown RBP19.88■□□□□ 0.77
Smarca5-201ENSMUST00000043359 Ggt6Q6PDE7 497 aa19.87■□□□□ 0.77
Smarca5-201ENSMUST00000043359 Ppp1r18Q8BQ30 594 aa19.87■□□□□ 0.77
Smarca5-201ENSMUST00000043359 Arhgap27A2AB59 869 aa19.84■□□□□ 0.77
Smarca5-201ENSMUST00000043359 MlecQ6ZQI3 291 aaKnown RBP19.8■□□□□ 0.76
Smarca5-201ENSMUST00000043359 Kdm2aP59997 1161 aa19.78■□□□□ 0.76
Smarca5-201ENSMUST00000043359 Fgd1P52734 960 aa19.76■□□□□ 0.75
Smarca5-201ENSMUST00000043359 DaxxO35613 739 aa19.72■□□□□ 0.75
Smarca5-201ENSMUST00000043359 Znf326O88291 580 aa19.71■□□□□ 0.75
Smarca5-201ENSMUST00000043359 Clstn1Q9EPL2 979 aa19.71■□□□□ 0.75
Smarca5-201ENSMUST00000043359 Brd4Q9ESU6 1400 aaKnown RBP19.69■□□□□ 0.74
Smarca5-201ENSMUST00000043359 Rgl3Q3UYI5 709 aa19.67■□□□□ 0.74
Smarca5-201ENSMUST00000043359 Clstn2Q9ER65 966 aa19.66■□□□□ 0.74
Smarca5-201ENSMUST00000043359 BlmO88700 1416 aa19.66■□□□□ 0.74
Smarca5-201ENSMUST00000043359 Q8BT18 775 aa19.65■□□□□ 0.74
Smarca5-201ENSMUST00000043359 Ubap1lG3UW59 384 aa19.63■□□□□ 0.73
Retrieved 100 of 22,080 RNA–protein pairs in 666 ms