RNA–Protein interactions for RNA: ENSMUST00000041418.12

Stag1-201, Transcript of Cohesin subunit SA-1, mousemouse

TSL 5 BASIC

Gene Stag1, Length 5,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1-201ENSMUST00000041418 Srpk2O54781 681 aaKnown RBP12.06□□□□□ -0.48
Stag1-201ENSMUST00000041418 Mtus2Q3UHD3 1353 aa12.06□□□□□ -0.48
Stag1-201ENSMUST00000041418 Rsph4aQ8BYM7 716 aa12.05□□□□□ -0.48
Stag1-201ENSMUST00000041418 MyclP10166 368 aa12.05□□□□□ -0.48
Stag1-201ENSMUST00000041418 Mroh3A0A1D5RM54 893 aa12.05□□□□□ -0.48
Stag1-201ENSMUST00000041418 Supt5hO55201 1082 aaKnown RBP12.04□□□□□ -0.48
Stag1-201ENSMUST00000041418 Myt1Q8CFC2 1127 aa12.04□□□□□ -0.48
Stag1-201ENSMUST00000041418 Rrp7aQ9D1C9 280 aaKnown RBP12.04□□□□□ -0.48
Stag1-201ENSMUST00000041418 Phldb1Q6PDH0 1371 aaKnown RBP12.02□□□□□ -0.49
Stag1-201ENSMUST00000041418 Rgl3Q3UYI5 709 aa12□□□□□ -0.49
Stag1-201ENSMUST00000041418 Gm20521D3Z5F7 333 aa11.99□□□□□ -0.49
Stag1-201ENSMUST00000041418 Exosc9Q9JHI7 438 aaKnown RBP11.98□□□□□ -0.49
Stag1-201ENSMUST00000041418 Cwc22Q8C5N3 908 aaKnown RBP11.97□□□□□ -0.49
Stag1-201ENSMUST00000041418 Lemd3Q9WU40 921 aa11.97□□□□□ -0.49
Stag1-201ENSMUST00000041418 Mia2Q91ZV0 1396 aa11.97□□□□□ -0.49
Stag1-201ENSMUST00000041418 Kif27Q7M6Z4 1394 aa11.96□□□□□ -0.49
Stag1-201ENSMUST00000041418 Sycp2Q9CUU3 1500 aa11.96□□□□□ -0.5
Stag1-201ENSMUST00000041418 Crybg2B7ZCC2 1516 aa11.95□□□□□ -0.5
Stag1-201ENSMUST00000041418 Kdm2aP59997 1161 aa11.95□□□□□ -0.5
Stag1-201ENSMUST00000041418 Fgd1P52734 960 aa11.95□□□□□ -0.5
Stag1-201ENSMUST00000041418 AknaQ80VW7 1404 aa11.95□□□□□ -0.5
Stag1-201ENSMUST00000041418 Fmn1Q05860 1466 aa11.93□□□□□ -0.5
Stag1-201ENSMUST00000041418 Anp32aO35381 247 aa11.93□□□□□ -0.5
Stag1-201ENSMUST00000041418 Mrs2Q5NCE8 434 aa11.93□□□□□ -0.5
Stag1-201ENSMUST00000041418 Iqcf3Q9D498 203 aa11.93□□□□□ -0.5
Stag1-201ENSMUST00000041418 Atad2bE9Q166 1460 aaKnown RBP11.93□□□□□ -0.5
Stag1-201ENSMUST00000041418 Cux2P70298 1426 aa11.92□□□□□ -0.5
Stag1-201ENSMUST00000041418 Dhx57Q6P5D3 1388 aaKnown RBP11.91□□□□□ -0.5
Stag1-201ENSMUST00000041418 Arid3cA6PWV5 409 aa11.9□□□□□ -0.5
Stag1-201ENSMUST00000041418 Mapk8ip2Q9ERE9 830 aa11.9□□□□□ -0.5
Stag1-201ENSMUST00000041418 Card11Q8CIS0 1159 aa11.88□□□□□ -0.51
Stag1-201ENSMUST00000041418 Stk24Q99KH8 431 aa11.88□□□□□ -0.51
Stag1-201ENSMUST00000041418 HdgfP51859 237 aaKnown RBP11.87□□□□□ -0.51
Stag1-201ENSMUST00000041418 Stag3O70576 1240 aa11.87□□□□□ -0.51
Stag1-201ENSMUST00000041418 Grwd1Q810D6 446 aaKnown RBP11.85□□□□□ -0.51
Stag1-201ENSMUST00000041418 Chmp4bQ9D8B3 224 aaKnown RBP11.85□□□□□ -0.51
Stag1-201ENSMUST00000041418 Rad21Q61550 635 aaKnown RBP11.85□□□□□ -0.51
Stag1-201ENSMUST00000041418 Mapk8ip3Q9ESN9 1337 aa11.85□□□□□ -0.51
Stag1-201ENSMUST00000041418 Aebp1Q640N1 1128 aa11.85□□□□□ -0.51
Stag1-201ENSMUST00000041418 Map4P27546 1125 aaKnown RBP11.84□□□□□ -0.51
Stag1-201ENSMUST00000041418 Pabpn1Q8CCS6 302 aaKnown RBP11.84□□□□□ -0.51
Stag1-201ENSMUST00000041418 Eif4g2Q62448 906 aaKnown RBP11.82□□□□□ -0.52
Stag1-201ENSMUST00000041418 Rpap1Q80TE0 1409 aa11.81□□□□□ -0.52
Stag1-201ENSMUST00000041418 NudcO35685 332 aaKnown RBP11.8□□□□□ -0.52
Stag1-201ENSMUST00000041418 Rangap1P46061 589 aaKnown RBP11.8□□□□□ -0.52
Stag1-201ENSMUST00000041418 CntlnA2AM05 1397 aa11.79□□□□□ -0.52
Stag1-201ENSMUST00000041418 Arid4bA2CG63 1314 aaKnown RBP11.79□□□□□ -0.52
Stag1-201ENSMUST00000041418 NgefQ8CHT1 710 aa11.78□□□□□ -0.52
Stag1-201ENSMUST00000041418 MlecQ6ZQI3 291 aaKnown RBP11.78□□□□□ -0.52
Stag1-201ENSMUST00000041418 Baz1bQ9Z277 1479 aa11.78□□□□□ -0.52
Stag1-201ENSMUST00000041418 Carmil1Q6EDY6 1374 aa11.77□□□□□ -0.52
Stag1-201ENSMUST00000041418 CftrP26361 1476 aa11.77□□□□□ -0.52
Stag1-201ENSMUST00000041418 Hsp90aa1P07901 733 aaKnown RBP11.77□□□□□ -0.53
Stag1-201ENSMUST00000041418 Fyco1Q8VDC1 1437 aa11.77□□□□□ -0.53
Stag1-201ENSMUST00000041418 Ggt6Q6PDE7 497 aa11.77□□□□□ -0.53
Stag1-201ENSMUST00000041418 LrpprcQ6PB66 1392 aaKnown RBP11.76□□□□□ -0.53
Stag1-201ENSMUST00000041418 Znf326O88291 580 aa11.76□□□□□ -0.53
Stag1-201ENSMUST00000041418 Cep162Q6ZQ06 1403 aa11.75□□□□□ -0.53
Stag1-201ENSMUST00000041418 Sall2Q9QX96 1004 aa11.75□□□□□ -0.53
Stag1-201ENSMUST00000041418 DaxxO35613 739 aa11.74□□□□□ -0.53
Stag1-201ENSMUST00000041418 Psme1P97371 249 aa11.74□□□□□ -0.53
Stag1-201ENSMUST00000041418 Calr4Q3TQS0 420 aa11.73□□□□□ -0.53
Stag1-201ENSMUST00000041418 Txndc2Q6P902 515 aa11.73□□□□□ -0.53
Stag1-201ENSMUST00000041418 Stard8Q8K031 1019 aa11.72□□□□□ -0.53
Stag1-201ENSMUST00000041418 Aplp2Q06335 707 aa11.72□□□□□ -0.53
Stag1-201ENSMUST00000041418 Gtf2e1Q9D0D5 440 aa11.72□□□□□ -0.53
Stag1-201ENSMUST00000041418 Irx6Q9ER75 438 aa11.71□□□□□ -0.53
Stag1-201ENSMUST00000041418 Csrnp3P59055 597 aa11.7□□□□□ -0.54
Stag1-201ENSMUST00000041418 Pkd2O35245 966 aa11.7□□□□□ -0.54
Stag1-201ENSMUST00000041418 Kif3bQ61771 747 aa11.69□□□□□ -0.54
Stag1-201ENSMUST00000041418 Trim26Q99PN3 545 aa11.69□□□□□ -0.54
Stag1-201ENSMUST00000041418 Dhx29Q6PGC1 1365 aaKnown RBP11.69□□□□□ -0.54
Stag1-201ENSMUST00000041418 Fhad1A6PWD2 1420 aa11.69□□□□□ -0.54
Stag1-201ENSMUST00000041418 WrnO09053 1401 aa11.68□□□□□ -0.54
Stag1-201ENSMUST00000041418 Ofd1Q80Z25 1017 aa11.67□□□□□ -0.54
Stag1-201ENSMUST00000041418 Gm6268A2A3U9 297 aa11.67□□□□□ -0.54
Stag1-201ENSMUST00000041418 Cabp1Q9JLK7 227 aa11.66□□□□□ -0.54
Stag1-201ENSMUST00000041418 Smarca4Q3TKT4 1613 aaKnown RBP11.66□□□□□ -0.54
Stag1-201ENSMUST00000041418 Rtf1A2AQ19 715 aaKnown RBP11.65□□□□□ -0.54
Stag1-201ENSMUST00000041418 Sart1Q9Z315 806 aaKnown RBP11.65□□□□□ -0.54
Stag1-201ENSMUST00000041418 Trak1Q6PD31 939 aa11.64□□□□□ -0.55
Stag1-201ENSMUST00000041418 ArxO35085 564 aa11.64□□□□□ -0.55
Stag1-201ENSMUST00000041418 Wdr43Q6ZQL4 677 aaKnown RBP11.64□□□□□ -0.55
Stag1-201ENSMUST00000041418 Anks4bQ8K3X6 423 aa11.63□□□□□ -0.55
Stag1-201ENSMUST00000041418 Soga1E1U8D0 1418 aa11.63□□□□□ -0.55
Stag1-201ENSMUST00000041418 Ccdc88bQ4QRL3 1481 aa11.63□□□□□ -0.55
Stag1-201ENSMUST00000041418 Ifit1bl1D3Z6F0 470 aa11.62□□□□□ -0.55
Stag1-201ENSMUST00000041418 Pde3bQ61409 1100 aa11.62□□□□□ -0.55
Stag1-201ENSMUST00000041418 Jph4Q80WT0 628 aa11.62□□□□□ -0.55
Stag1-201ENSMUST00000041418 Stk26Q99JT2 416 aa11.62□□□□□ -0.55
Stag1-201ENSMUST00000041418 Nup155Q99P88 1391 aaKnown RBP11.62□□□□□ -0.55
Stag1-201ENSMUST00000041418 Arhgap35Q91YM2 1499 aa11.61□□□□□ -0.55
Stag1-201ENSMUST00000041418 Ppp4r2Q0VGB7 417 aa11.61□□□□□ -0.55
Stag1-201ENSMUST00000041418 Plekhh2Q8C115 1491 aa11.61□□□□□ -0.55
Stag1-201ENSMUST00000041418 Tmf1B9EKI3 1091 aa11.6□□□□□ -0.55
Stag1-201ENSMUST00000041418 HnrnpuQ8VEK3 800 aaKnown RBP11.59□□□□□ -0.55
Stag1-201ENSMUST00000041418 Cecr2E9Q2Z1 1453 aa11.59□□□□□ -0.55
Stag1-201ENSMUST00000041418 Mphosph9A6H5Y1 991 aa11.59□□□□□ -0.55
Stag1-201ENSMUST00000041418 Map7O88735 730 aa11.59□□□□□ -0.55
Stag1-201ENSMUST00000041418 Cnga1P29974 684 aa11.59□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms