RNA–Protein interactions for RNA: ENSMUST00000037117.5

Gtf3c4-201, Transcript of General transcription factor 3C polypeptide 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Gtf3c4, Length 6,941 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c4-201ENSMUST00000037117 Eid3Q3V124 375 aa16.07■□□□□ 0.16
Gtf3c4-201ENSMUST00000037117 Rtl5Q5DTT4 599 aa16.05■□□□□ 0.16
Gtf3c4-201ENSMUST00000037117 Ppm1fQ8CGA0 452 aa16.01■□□□□ 0.15
Gtf3c4-201ENSMUST00000037117 Rtl1Q7M732 1744 aa15.89■□□□□ 0.13
Gtf3c4-201ENSMUST00000037117 Aplp2Q06335 707 aa15.88■□□□□ 0.13
Gtf3c4-201ENSMUST00000037117 Chic2Q9D9G3 165 aa15.86■□□□□ 0.13
Gtf3c4-201ENSMUST00000037117 Mier1Q5UAK0 511 aa15.85■□□□□ 0.13
Gtf3c4-201ENSMUST00000037117 1700019A02RikA0A087WPV9 146 aa15.83■□□□□ 0.12
Gtf3c4-201ENSMUST00000037117 Isy1Q69ZQ2 285 aaKnown RBP15.8■□□□□ 0.12
Gtf3c4-201ENSMUST00000037117 Ripply1Q2WG77 201 aa15.79■□□□□ 0.12
Gtf3c4-201ENSMUST00000037117 Noc3lQ8VI84 807 aaKnown RBP15.78■□□□□ 0.12
Gtf3c4-201ENSMUST00000037117 Apbb1Q9QXJ1 710 aa15.76■□□□□ 0.11
Gtf3c4-201ENSMUST00000037117 Ncbp3Q8BZR9 615 aaKnown RBP15.74■□□□□ 0.11
Gtf3c4-201ENSMUST00000037117 Plin1Q8CGN5 517 aa15.73■□□□□ 0.11
Gtf3c4-201ENSMUST00000037117 Chrna2Q91X60 512 aa15.72■□□□□ 0.11
Gtf3c4-201ENSMUST00000037117 Anp32aO35381 247 aa15.71■□□□□ 0.11
Gtf3c4-201ENSMUST00000037117 MlecQ6ZQI3 291 aaKnown RBP15.71■□□□□ 0.11
Gtf3c4-201ENSMUST00000037117 Kdm2aP59997 1161 aa15.71■□□□□ 0.11
Gtf3c4-201ENSMUST00000037117 Ppp4r2Q0VGB7 417 aa15.69■□□□□ 0.1
Gtf3c4-201ENSMUST00000037117 Armcx1Q9CX83 456 aa15.68■□□□□ 0.1
Gtf3c4-201ENSMUST00000037117 PnnO35691 725 aaKnown RBP15.67■□□□□ 0.1
Gtf3c4-201ENSMUST00000037117 Senp3Q9EP97 568 aaKnown RBP15.67■□□□□ 0.1
Gtf3c4-201ENSMUST00000037117 Znf316Q6PGE4 1016 aa15.64■□□□□ 0.09
Gtf3c4-201ENSMUST00000037117 Pes1Q9EQ61 584 aaKnown RBP15.64■□□□□ 0.09
Gtf3c4-201ENSMUST00000037117 BccipQ9CWI3 316 aa15.64■□□□□ 0.09
Gtf3c4-201ENSMUST00000037117 Mical1Q8VDP3 1048 aa15.62■□□□□ 0.09
Gtf3c4-201ENSMUST00000037117 PtmaP26350 111 aa15.61■□□□□ 0.09
Gtf3c4-201ENSMUST00000037117 Rb1cc1Q9ESK9 1588 aa15.61■□□□□ 0.09
Gtf3c4-201ENSMUST00000037117 Gm6268A2A3U9 297 aa15.6■□□□□ 0.09
Gtf3c4-201ENSMUST00000037117 Neurod2Q62414 383 aa15.59■□□□□ 0.09
Gtf3c4-201ENSMUST00000037117 Sh3bp5Q9Z131 463 aa15.58■□□□□ 0.08
Gtf3c4-201ENSMUST00000037117 Brd4Q9ESU6 1400 aaKnown RBP15.57■□□□□ 0.08
Gtf3c4-201ENSMUST00000037117 Spryd3E9Q9B3 442 aa15.56■□□□□ 0.08
Gtf3c4-201ENSMUST00000037117 Ubl4bQ9CQ84 188 aa15.55■□□□□ 0.08
Gtf3c4-201ENSMUST00000037117 Cnga1P29974 684 aa15.55■□□□□ 0.08
Gtf3c4-201ENSMUST00000037117 Exosc9Q9JHI7 438 aaKnown RBP15.54■□□□□ 0.08
Gtf3c4-201ENSMUST00000037117 Anapc15P60007 132 aa15.54■□□□□ 0.08
Gtf3c4-201ENSMUST00000037117 Trim30dE9PWL0 497 aa15.53■□□□□ 0.08
Gtf3c4-201ENSMUST00000037117 Plcb2A3KGF7 1181 aa15.52■□□□□ 0.07
Gtf3c4-201ENSMUST00000037117 Ciz1Q8VEH2 845 aa15.52■□□□□ 0.07
Gtf3c4-201ENSMUST00000037117 Vps53Q8CCB4 832 aa15.51■□□□□ 0.07
Gtf3c4-201ENSMUST00000037117 Tnnt1O88346 262 aa15.51■□□□□ 0.07
Gtf3c4-201ENSMUST00000037117 AcrbpQ3V140 540 aa15.51■□□□□ 0.07
Gtf3c4-201ENSMUST00000037117 Trim44Q9QXA7 346 aa15.5■□□□□ 0.07
Gtf3c4-201ENSMUST00000037117 Ppp1r18Q8BQ30 594 aa15.5■□□□□ 0.07
Gtf3c4-201ENSMUST00000037117 Stk24Q99KH8 431 aa15.5■□□□□ 0.07
Gtf3c4-201ENSMUST00000037117 Hsp90ab1P11499 724 aaKnown RBP15.49■□□□□ 0.07
Gtf3c4-201ENSMUST00000037117 Sox12Q04890 314 aa15.49■□□□□ 0.07
Gtf3c4-201ENSMUST00000037117 Dbr1Q923B1 550 aa15.49■□□□□ 0.07
Gtf3c4-201ENSMUST00000037117 NacadQ5SWP3 1504 aa15.49■□□□□ 0.07
Gtf3c4-201ENSMUST00000037117 Rgl3Q3UYI5 709 aa15.48■□□□□ 0.07
Gtf3c4-201ENSMUST00000037117 Grwd1Q810D6 446 aaKnown RBP15.46■□□□□ 0.07
Gtf3c4-201ENSMUST00000037117 Rassf8Q8CJ96 419 aa15.46■□□□□ 0.07
Gtf3c4-201ENSMUST00000037117 Paf1Q8K2T8 535 aa15.44■□□□□ 0.06
Gtf3c4-201ENSMUST00000037117 IqubQ8CDK3 788 aa15.42■□□□□ 0.06
Gtf3c4-201ENSMUST00000037117 Arid4aF8VPQ2 1261 aaKnown RBP15.4■□□□□ 0.06
Gtf3c4-201ENSMUST00000037117 Mrs2Q5NCE8 434 aa15.38■□□□□ 0.05
Gtf3c4-201ENSMUST00000037117 Dcaf1Q80TR8 1506 aa15.38■□□□□ 0.05
Gtf3c4-201ENSMUST00000037117 Tomm22Q9CPQ3 142 aa15.36■□□□□ 0.05
Gtf3c4-201ENSMUST00000037117 Hsp90b1P08113 802 aaKnown RBP15.36■□□□□ 0.05
Gtf3c4-201ENSMUST00000037117 Fnbp4Q6ZQ03 1031 aa15.36■□□□□ 0.05
Gtf3c4-201ENSMUST00000037117 Stag3O70576 1240 aa15.35■□□□□ 0.05
Gtf3c4-201ENSMUST00000037117 Pcmtd1P59913 357 aa15.34■□□□□ 0.05
Gtf3c4-201ENSMUST00000037117 Calr4Q3TQS0 420 aa15.34■□□□□ 0.05
Gtf3c4-201ENSMUST00000037117 U2surpQ6NV83 1029 aaKnown RBP15.34■□□□□ 0.05
Gtf3c4-201ENSMUST00000037117 Srpk2O54781 681 aaKnown RBP15.34■□□□□ 0.05
Gtf3c4-201ENSMUST00000037117 Bcl11bQ99PV8 884 aa15.33■□□□□ 0.04
Gtf3c4-201ENSMUST00000037117 Gm20521D3Z5F7 333 aa15.32■□□□□ 0.04
Gtf3c4-201ENSMUST00000037117 CanxP35564 591 aaKnown RBP15.32■□□□□ 0.04
Gtf3c4-201ENSMUST00000037117 Znf704Q9ERQ3 566 aa15.31■□□□□ 0.04
Gtf3c4-201ENSMUST00000037117 Klf15Q9EPW2 415 aa15.31■□□□□ 0.04
Gtf3c4-201ENSMUST00000037117 Stk26Q99JT2 416 aa15.31■□□□□ 0.04
Gtf3c4-201ENSMUST00000037117 Ccdc96Q9CR92 584 aa15.31■□□□□ 0.04
Gtf3c4-201ENSMUST00000037117 ClspnQ80YR7 1315 aa15.31■□□□□ 0.04
Gtf3c4-201ENSMUST00000037117 Podxl2Q8CAE9 603 aa15.3■□□□□ 0.04
Gtf3c4-201ENSMUST00000037117 Hdgfl1Q2VPR5 283 aa15.29■□□□□ 0.04
Gtf3c4-201ENSMUST00000037117 Mak16Q8BGS0 296 aaKnown RBP15.28■□□□□ 0.04
Gtf3c4-201ENSMUST00000037117 Mapk8ip3Q9ESN9 1337 aa15.26■□□□□ 0.03
Gtf3c4-201ENSMUST00000037117 IbspQ61711 324 aa15.26■□□□□ 0.03
Gtf3c4-201ENSMUST00000037117 Arhgap27A2AB59 869 aa15.25■□□□□ 0.03
Gtf3c4-201ENSMUST00000037117 Ppm1gQ61074 542 aa15.23■□□□□ 0.03
Gtf3c4-201ENSMUST00000037117 Clip1Q922J3 1391 aa15.23■□□□□ 0.03
Gtf3c4-201ENSMUST00000037117 Mroh3A0A1D5RM54 893 aa15.22■□□□□ 0.03
Gtf3c4-201ENSMUST00000037117 Baz1aO88379 1555 aa15.22■□□□□ 0.03
Gtf3c4-201ENSMUST00000037117 Nol10Q5RJG1 687 aaKnown RBP15.22■□□□□ 0.03
Gtf3c4-201ENSMUST00000037117 B4galnt3Q6L8S8 986 aa15.21■□□□□ 0.03
Gtf3c4-201ENSMUST00000037117 Cep164Q5DU05 1446 aa15.21■□□□□ 0.03
Gtf3c4-201ENSMUST00000037117 Pibf1E9Q6K3 756 aa15.21■□□□□ 0.03
Gtf3c4-201ENSMUST00000037117 Chmp3Q9CQ10 224 aa15.21■□□□□ 0.03
Gtf3c4-201ENSMUST00000037117 Kdm5dQ62240 1548 aa15.2■□□□□ 0.02
Gtf3c4-201ENSMUST00000037117 Casc1Q6TDU8 730 aa15.19■□□□□ 0.02
Gtf3c4-201ENSMUST00000037117 Pak3Q61036 559 aa15.18■□□□□ 0.02
Gtf3c4-201ENSMUST00000037117 Taok2Q6ZQ29 1240 aa15.18■□□□□ 0.02
Gtf3c4-201ENSMUST00000037117 CrebrfQ8CDG5 640 aaKnown RBP15.17■□□□□ 0.02
Gtf3c4-201ENSMUST00000037117 Rrp7aQ9D1C9 280 aaKnown RBP15.17■□□□□ 0.02
Gtf3c4-201ENSMUST00000037117 Sall2Q9QX96 1004 aa15.17■□□□□ 0.02
Gtf3c4-201ENSMUST00000037117 CgnP59242 1191 aa15.17■□□□□ 0.02
Gtf3c4-201ENSMUST00000037117 Rsph4aQ8BYM7 716 aa15.16■□□□□ 0.02
Gtf3c4-201ENSMUST00000037117 Samd1D3YXK1 519 aa15.16■□□□□ 0.02
Gtf3c4-201ENSMUST00000037117 Fam71e1A1L3C1 212 aa15.15■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms