RNA–Protein interactions for RNA: ENSMUST00000037117.5

Gtf3c4-201, Transcript of General transcription factor 3C polypeptide 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Gtf3c4, Length 6,941 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c4-201ENSMUST00000037117 Rhox8Q6VSS7 320 aa21.09■□□□□ 0.97
Gtf3c4-201ENSMUST00000037117 Ehmt2Q9Z148 1263 aaKnown RBP19.64■□□□□ 0.73
Gtf3c4-201ENSMUST00000037117 Ube2uB1AUC4 352 aa19.45■□□□□ 0.7
Gtf3c4-201ENSMUST00000037117 Wdr66E9Q743 1299 aa19■□□□□ 0.63
Gtf3c4-201ENSMUST00000037117 Zeb1Q64318 1117 aa18.95■□□□□ 0.62
Gtf3c4-201ENSMUST00000037117 Esf1Q3V1V3 845 aaKnown RBP18.79■□□□□ 0.6
Gtf3c4-201ENSMUST00000037117 Cngb1E1AZ71 1325 aa18.77■□□□□ 0.6
Gtf3c4-201ENSMUST00000037117 Amer1Q7TS75 1132 aa18.75■□□□□ 0.59
Gtf3c4-201ENSMUST00000037117 Gab3Q8BSM5 595 aa18.57■□□□□ 0.56
Gtf3c4-201ENSMUST00000037117 Ccdc136Q3TVA9 1136 aa18.51■□□□□ 0.55
Gtf3c4-201ENSMUST00000037117 Slc24a1Q91WD8 1130 aa18.48■□□□□ 0.55
Gtf3c4-201ENSMUST00000037117 Myt1lP97500 1187 aa18.48■□□□□ 0.55
Gtf3c4-201ENSMUST00000037117 Pelp1Q9DBD5 1123 aaKnown RBP18.48■□□□□ 0.55
Gtf3c4-201ENSMUST00000037117 Npm2Q80W85 207 aa18.47■□□□□ 0.55
Gtf3c4-201ENSMUST00000037117 Las1lA2BE28 776 aaKnown RBP18.42■□□□□ 0.54
Gtf3c4-201ENSMUST00000037117 Rpgrip1Q9EPQ2 1331 aa18.24■□□□□ 0.51
Gtf3c4-201ENSMUST00000037117 Ttbk1Q6PCN3 1308 aa18.15■□□□□ 0.5
Gtf3c4-201ENSMUST00000037117 Plppr3Q7TPB0 716 aa17.95■□□□□ 0.46
Gtf3c4-201ENSMUST00000037117 Chic1Q8CBW7 227 aa17.89■□□□□ 0.45
Gtf3c4-201ENSMUST00000037117 Neurod1Q60867 357 aa17.84■□□□□ 0.45
Gtf3c4-201ENSMUST00000037117 Os9Q8K2C7 672 aa17.84■□□□□ 0.45
Gtf3c4-201ENSMUST00000037117 Il27Q8K3I6 234 aa17.78■□□□□ 0.44
Gtf3c4-201ENSMUST00000037117 NischQ80TM9 1593 aa17.77■□□□□ 0.43
Gtf3c4-201ENSMUST00000037117 HrcG5E8J6 738 aa17.77■□□□□ 0.43
Gtf3c4-201ENSMUST00000037117 UbtfP25976 765 aaKnown RBP17.75■□□□□ 0.43
Gtf3c4-201ENSMUST00000037117 4930567H17RikQ3V0K5 233 aa17.73■□□□□ 0.43
Gtf3c4-201ENSMUST00000037117 Zbtb7cQ8VCZ7 619 aa17.72■□□□□ 0.43
Gtf3c4-201ENSMUST00000037117 Ifnlr1Q8CGK5 535 aa17.68■□□□□ 0.42
Gtf3c4-201ENSMUST00000037117 Ap3b1Q9Z1T1 1105 aa17.61■□□□□ 0.41
Gtf3c4-201ENSMUST00000037117 Eif5bQ05D44 1216 aaKnown RBP17.58■□□□□ 0.41
Gtf3c4-201ENSMUST00000037117 Ppargc1bQ8VHJ7 1014 aa17.55■□□□□ 0.4
Gtf3c4-201ENSMUST00000037117 4933416C03RikQ3V063 378 aa17.54■□□□□ 0.4
Gtf3c4-201ENSMUST00000037117 Gm13697A2AK42 830 aa17.49■□□□□ 0.39
Gtf3c4-201ENSMUST00000037117 Prdm10Q3UTQ7 1184 aa17.45■□□□□ 0.38
Gtf3c4-201ENSMUST00000037117 Zbtb4Q5F293 982 aa17.41■□□□□ 0.38
Gtf3c4-201ENSMUST00000037117 CenpbP27790 599 aa17.38■□□□□ 0.37
Gtf3c4-201ENSMUST00000037117 Fam50aQ9WV03 339 aaKnown RBP17.33■□□□□ 0.36
Gtf3c4-201ENSMUST00000037117 Trim41Q5NCC3 630 aa17.31■□□□□ 0.36
Gtf3c4-201ENSMUST00000037117 Atp1b4Q99ME6 356 aa17.29■□□□□ 0.36
Gtf3c4-201ENSMUST00000037117 Hnrnpul2Q00PI9 745 aaKnown RBP17.19■□□□□ 0.34
Gtf3c4-201ENSMUST00000037117 Rangap1P46061 589 aaKnown RBP17.19■□□□□ 0.34
Gtf3c4-201ENSMUST00000037117 NrdcQ8BHG1 1161 aa17.14■□□□□ 0.33
Gtf3c4-201ENSMUST00000037117 ArxO35085 564 aa17.13■□□□□ 0.33
Gtf3c4-201ENSMUST00000037117 NeflP08551 543 aa17.11■□□□□ 0.33
Gtf3c4-201ENSMUST00000037117 Gm13695A2AK44 830 aa17.09■□□□□ 0.33
Gtf3c4-201ENSMUST00000037117 DiexfQ8BTT6 772 aaKnown RBP17.08■□□□□ 0.32
Gtf3c4-201ENSMUST00000037117 Erich6D3Z6S9 713 aa17.07■□□□□ 0.32
Gtf3c4-201ENSMUST00000037117 Polr3glQ8R0C0 218 aa17.06■□□□□ 0.32
Gtf3c4-201ENSMUST00000037117 NclP09405 707 aaKnown RBP17.04■□□□□ 0.32
Gtf3c4-201ENSMUST00000037117 Anp32bQ9EST5 272 aaKnown RBP17■□□□□ 0.31
Gtf3c4-201ENSMUST00000037117 Myt1Q8CFC2 1127 aa16.99■□□□□ 0.31
Gtf3c4-201ENSMUST00000037117 Stra8P70278 393 aa16.98■□□□□ 0.31
Gtf3c4-201ENSMUST00000037117 Cdk11bP24788 784 aaKnown RBP16.91■□□□□ 0.3
Gtf3c4-201ENSMUST00000037117 Ythdc1E9Q5K9 736 aaKnown RBP16.9■□□□□ 0.3
Gtf3c4-201ENSMUST00000037117 Fkbp15Q6P9Q6 1216 aaKnown RBP16.87■□□□□ 0.29
Gtf3c4-201ENSMUST00000037117 Abcc9P70170 1546 aa16.82■□□□□ 0.28
Gtf3c4-201ENSMUST00000037117 Acin1Q9JIX8 1338 aaKnown RBP16.76■□□□□ 0.27
Gtf3c4-201ENSMUST00000037117 Lmod2Q3UHZ5 550 aa16.75■□□□□ 0.27
Gtf3c4-201ENSMUST00000037117 Irx6Q9ER75 438 aa16.73■□□□□ 0.27
Gtf3c4-201ENSMUST00000037117 CatipB9EKE5 520 aa16.71■□□□□ 0.27
Gtf3c4-201ENSMUST00000037117 Mapk8ip2Q9ERE9 830 aa16.69■□□□□ 0.26
Gtf3c4-201ENSMUST00000037117 Nlrp6Q91WS2 869 aa16.68■□□□□ 0.26
Gtf3c4-201ENSMUST00000037117 Lmod3E9QA62 571 aa16.6■□□□□ 0.25
Gtf3c4-201ENSMUST00000037117 Gm35339A0A140LHH9 1649 aa16.59■□□□□ 0.25
Gtf3c4-201ENSMUST00000037117 Csrnp3P59055 597 aa16.59■□□□□ 0.25
Gtf3c4-201ENSMUST00000037117 Safb2Q80YR5 991 aaKnown RBP16.58■□□□□ 0.25
Gtf3c4-201ENSMUST00000037117 Vsig10D3YX43 558 aa16.56■□□□□ 0.24
Gtf3c4-201ENSMUST00000037117 Clstn1Q9EPL2 979 aa16.56■□□□□ 0.24
Gtf3c4-201ENSMUST00000037117 DaxxO35613 739 aa16.55■□□□□ 0.24
Gtf3c4-201ENSMUST00000037117 Rtn4Q99P72 1162 aaKnown RBP16.53■□□□□ 0.24
Gtf3c4-201ENSMUST00000037117 Hdac5Q9Z2V6 1113 aa16.51■□□□□ 0.23
Gtf3c4-201ENSMUST00000037117 P3h3Q8CG70 732 aa16.5■□□□□ 0.23
Gtf3c4-201ENSMUST00000037117 NefmP08553 848 aa16.48■□□□□ 0.23
Gtf3c4-201ENSMUST00000037117 Zcchc6Q5BLK4 1491 aaKnown RBP16.45■□□□□ 0.22
Gtf3c4-201ENSMUST00000037117 Nop58Q6DFW4 536 aaKnown RBP16.41■□□□□ 0.22
Gtf3c4-201ENSMUST00000037117 Znf326O88291 580 aa16.39■□□□□ 0.21
Gtf3c4-201ENSMUST00000037117 Trim26Q99PN3 545 aa16.34■□□□□ 0.21
Gtf3c4-201ENSMUST00000037117 Pcgf6Q99NA9 353 aa16.33■□□□□ 0.2
Gtf3c4-201ENSMUST00000037117 Abcc8B2RUS7 1588 aa16.33■□□□□ 0.2
Gtf3c4-201ENSMUST00000037117 Gm38655A0A286YDK6 273 aa16.33■□□□□ 0.2
Gtf3c4-201ENSMUST00000037117 Hsp90aa1P07901 733 aaKnown RBP16.33■□□□□ 0.2
Gtf3c4-201ENSMUST00000037117 MyclP10166 368 aa16.31■□□□□ 0.2
Gtf3c4-201ENSMUST00000037117 Ubap1lG3UW59 384 aa16.29■□□□□ 0.2
Gtf3c4-201ENSMUST00000037117 Plekhg3Q4VAC9 1341 aa16.25■□□□□ 0.19
Gtf3c4-201ENSMUST00000037117 Npm1Q61937 292 aaKnown RBP16.24■□□□□ 0.19
Gtf3c4-201ENSMUST00000037117 Rad21Q61550 635 aaKnown RBP16.23■□□□□ 0.19
Gtf3c4-201ENSMUST00000037117 Arid4bA2CG63 1314 aaKnown RBP16.22■□□□□ 0.19
Gtf3c4-201ENSMUST00000037117 Prm3Q62100 101 aa16.21■□□□□ 0.19
Gtf3c4-201ENSMUST00000037117 Slc4a1apE9PX68 744 aa16.21■□□□□ 0.19
Gtf3c4-201ENSMUST00000037117 NgefQ8CHT1 710 aa16.18■□□□□ 0.18
Gtf3c4-201ENSMUST00000037117 TonslQ6NZL6 1363 aa16.18■□□□□ 0.18
Gtf3c4-201ENSMUST00000037117 Ecm2Q5FW85 670 aa16.18■□□□□ 0.18
Gtf3c4-201ENSMUST00000037117 Q8BT18 775 aa16.17■□□□□ 0.18
Gtf3c4-201ENSMUST00000037117 DekQ7TNV0 380 aaKnown RBP16.15■□□□□ 0.18
Gtf3c4-201ENSMUST00000037117 Upf2A2AT37 1269 aaKnown RBP16.12■□□□□ 0.17
Gtf3c4-201ENSMUST00000037117 Supt5hO55201 1082 aaKnown RBP16.11■□□□□ 0.17
Gtf3c4-201ENSMUST00000037117 Ggt6Q6PDE7 497 aa16.11■□□□□ 0.17
Gtf3c4-201ENSMUST00000037117 Tnnt3Q9QZ47 272 aa16.1■□□□□ 0.17
Gtf3c4-201ENSMUST00000037117 Fgd1P52734 960 aa16.08■□□□□ 0.17
Gtf3c4-201ENSMUST00000037117 Ccdc180J3QNE4 1664 aa16.08■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms