RNA–Protein interactions for RNA: ENSMUST00000034245.15

Usb1-201, Transcript of U6 snRNA phosphodiesterase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usb1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1-201ENSMUST00000034245 Polr1aO35134 1717 aaKnown RBP26.12■■□□□ 1.77
Usb1-201ENSMUST00000034245 Rpap1Q80TE0 1409 aa26.11■■□□□ 1.77
Usb1-201ENSMUST00000034245 EprsQ8CGC7 1512 aaKnown RBP26.09■■□□□ 1.77
Usb1-201ENSMUST00000034245 Gpatch8A2A6A1 1505 aa26.09■■□□□ 1.77
Usb1-201ENSMUST00000034245 Rusc2Q80U22 1514 aa26.09■■□□□ 1.77
Usb1-201ENSMUST00000034245 Setd5Q5XJV7 1441 aa26.08■■□□□ 1.77
Usb1-201ENSMUST00000034245 Ehmt2Q9Z148 1263 aaKnown RBP26.05■■□□□ 1.76
Usb1-201ENSMUST00000034245 Fyco1Q8VDC1 1437 aa26.03■■□□□ 1.76
Usb1-201ENSMUST00000034245 Cux1P53564 1515 aa26.02■■□□□ 1.76
Usb1-201ENSMUST00000034245 Ankrd26Q811D2 1581 aa26■■□□□ 1.75
Usb1-201ENSMUST00000034245 Setd1bQ8CFT2 1985 aa26■■□□□ 1.75
Usb1-201ENSMUST00000034245 Adamts12Q811B3 1600 aa25.95■■□□□ 1.74
Usb1-201ENSMUST00000034245 CadpsQ80TJ1 1355 aa25.94■■□□□ 1.74
Usb1-201ENSMUST00000034245 Erich3F6QRE9 1637 aa25.93■■□□□ 1.74
Usb1-201ENSMUST00000034245 TchhA0A0B4J1F9 1599 aa25.92■■□□□ 1.74
Usb1-201ENSMUST00000034245 Gm7298A0A0N4SVU1 1476 aa25.91■■□□□ 1.74
Usb1-201ENSMUST00000034245 WizO88286 1684 aaKnown RBP25.9■■□□□ 1.74
Usb1-201ENSMUST00000034245 Arap1Q4LDD4 1452 aa25.9■■□□□ 1.74
Usb1-201ENSMUST00000034245 Ap3b1Q9Z1T1 1105 aa25.87■■□□□ 1.73
Usb1-201ENSMUST00000034245 Soga1E1U8D0 1418 aa25.84■■□□□ 1.73
Usb1-201ENSMUST00000034245 PxdnQ3UQ28 1475 aa25.84■■□□□ 1.73
Usb1-201ENSMUST00000034245 Arhgef5E9Q7D5 1581 aa25.83■■□□□ 1.73
Usb1-201ENSMUST00000034245 Abca16E9PWJ7 1678 aa25.81■■□□□ 1.72
Usb1-201ENSMUST00000034245 Abca5Q8K448 1642 aa25.81■■□□□ 1.72
Usb1-201ENSMUST00000034245 Arhgap27A2AB59 869 aa25.81■■□□□ 1.72
Usb1-201ENSMUST00000034245 Aebp1Q640N1 1128 aa25.79■■□□□ 1.72
Usb1-201ENSMUST00000034245 Lmo7E9PYF4 1699 aaKnown RBP25.77■■□□□ 1.72
Usb1-201ENSMUST00000034245 Pcf11G3X9Z4 1553 aa25.77■■□□□ 1.72
Usb1-201ENSMUST00000034245 CntlnA2AM05 1397 aa25.76■■□□□ 1.71
Usb1-201ENSMUST00000034245 Fgd6Q69ZL1 1399 aa25.75■■□□□ 1.71
Usb1-201ENSMUST00000034245 Abcc2Q8VI47 1543 aa25.73■■□□□ 1.71
Usb1-201ENSMUST00000034245 Plekhg3Q4VAC9 1341 aa25.72■■□□□ 1.71
Usb1-201ENSMUST00000034245 BlmO88700 1416 aa25.69■■□□□ 1.7
Usb1-201ENSMUST00000034245 Tiam1Q60610 1591 aa25.68■■□□□ 1.7
Usb1-201ENSMUST00000034245 Naip1Q9QWK5 1403 aa25.66■■□□□ 1.7
Usb1-201ENSMUST00000034245 WrnO09053 1401 aa25.65■■□□□ 1.7
Usb1-201ENSMUST00000034245 Map3k4O08648 1597 aa25.64■■□□□ 1.69
Usb1-201ENSMUST00000034245 Shroom2A2ALU4 1481 aa25.64■■□□□ 1.69
Usb1-201ENSMUST00000034245 Dnmt1P13864 1620 aaKnown RBP25.6■■□□□ 1.69
Usb1-201ENSMUST00000034245 AknaQ80VW7 1404 aa25.59■■□□□ 1.69
Usb1-201ENSMUST00000034245 Kif27Q7M6Z4 1394 aa25.59■■□□□ 1.69
Usb1-201ENSMUST00000034245 Peg3Q3URU2 1571 aa25.57■■□□□ 1.68
Usb1-201ENSMUST00000034245 UbtfP25976 765 aaKnown RBP25.56■■□□□ 1.68
Usb1-201ENSMUST00000034245 Slx4Q6P1D7 1565 aa25.56■■□□□ 1.68
Usb1-201ENSMUST00000034245 Rpgrip1Q9EPQ2 1331 aa25.55■■□□□ 1.68
Usb1-201ENSMUST00000034245 Neo1P97798 1493 aa25.54■■□□□ 1.68
Usb1-201ENSMUST00000034245 Lmod2Q3UHZ5 550 aa25.5■■□□□ 1.67
Usb1-201ENSMUST00000034245 BC005561E9Q5E2 1589 aa25.49■■□□□ 1.67
Usb1-201ENSMUST00000034245 Jph4Q80WT0 628 aa25.47■■□□□ 1.67
Usb1-201ENSMUST00000034245 Gm1043A0A140LJC2 1431 aa25.46■■□□□ 1.67
Usb1-201ENSMUST00000034245 Gm14025A2AP89 1413 aa25.42■■□□□ 1.66
Usb1-201ENSMUST00000034245 Acin1Q9JIX8 1338 aaKnown RBP25.42■■□□□ 1.66
Usb1-201ENSMUST00000034245 Pabpn1Q8CCS6 302 aaKnown RBP25.41■■□□□ 1.66
Usb1-201ENSMUST00000034245 Abcc1O35379 1528 aa25.41■■□□□ 1.66
Usb1-201ENSMUST00000034245 Arhgap31A6X8Z5 1425 aa25.41■■□□□ 1.66
Usb1-201ENSMUST00000034245 Arhgef12Q8R4H2 1543 aaKnown RBP25.4■■□□□ 1.66
Usb1-201ENSMUST00000034245 Rapgef6Q5NCJ1 1609 aa25.4■■□□□ 1.66
Usb1-201ENSMUST00000034245 Pelp1Q9DBD5 1123 aaKnown RBP25.39■■□□□ 1.66
Usb1-201ENSMUST00000034245 Ncoa2Q61026 1462 aa25.37■■□□□ 1.65
Usb1-201ENSMUST00000034245 Ccdc141E9Q8Q6 1531 aa25.34■■□□□ 1.65
Usb1-201ENSMUST00000034245 Rrbp1Q99PL5 1605 aaKnown RBP25.34■■□□□ 1.65
Usb1-201ENSMUST00000034245 Mug1P28665 1476 aa25.28■■□□□ 1.64
Usb1-201ENSMUST00000034245 Dhx57Q6P5D3 1388 aaKnown RBP25.27■■□□□ 1.64
Usb1-201ENSMUST00000034245 Zcchc11B2RX14 1644 aaKnown RBP25.27■■□□□ 1.64
Usb1-201ENSMUST00000034245 Ncoa3O09000 1398 aa25.26■■□□□ 1.63
Usb1-201ENSMUST00000034245 Fkbp15Q6P9Q6 1216 aaKnown RBP25.26■■□□□ 1.63
Usb1-201ENSMUST00000034245 Arhgef11Q68FM7 1552 aa25.24■■□□□ 1.63
Usb1-201ENSMUST00000034245 Mier1Q5UAK0 511 aa25.24■■□□□ 1.63
Usb1-201ENSMUST00000034245 Chd1P40201 1711 aa25.24■■□□□ 1.63
Usb1-201ENSMUST00000034245 Lmtk2Q3TYD6 1471 aa25.23■■□□□ 1.63
Usb1-201ENSMUST00000034245 Magi1Q6RHR9 1471 aa25.23■■□□□ 1.63
Usb1-201ENSMUST00000034245 Fam163aQ8CAA5 168 aa25.22■■□□□ 1.63
Usb1-201ENSMUST00000034245 NexmifQ5DTT1 1515 aa25.21■■□□□ 1.63
Usb1-201ENSMUST00000034245 Ccnb3Q810T2 1396 aa25.21■■□□□ 1.63
Usb1-201ENSMUST00000034245 Ythdc2B2RR83 1445 aaKnown RBP25.19■■□□□ 1.62
Usb1-201ENSMUST00000034245 Gapvd1Q6PAR5 1458 aa25.18■■□□□ 1.62
Usb1-201ENSMUST00000034245 Ncapd3Q6ZQK0 1506 aa25.17■■□□□ 1.62
Usb1-201ENSMUST00000034245 Kdm5bQ80Y84 1544 aa25.16■■□□□ 1.62
Usb1-201ENSMUST00000034245 Mroh2aD3Z750 1679 aa25.15■■□□□ 1.62
Usb1-201ENSMUST00000034245 Kiaa1551Q5DTW7 1521 aa25.14■■□□□ 1.61
Usb1-201ENSMUST00000034245 Fancd2Q80V62 1450 aa25.13■■□□□ 1.61
Usb1-201ENSMUST00000034245 Mapkbp1Q6NS57 1503 aa25.1■■□□□ 1.61
Usb1-201ENSMUST00000034245 Igf1rQ60751 1373 aa25.09■■□□□ 1.61
Usb1-201ENSMUST00000034245 3425401B19RikD3Z1D3 1412 aa25.08■■□□□ 1.61
Usb1-201ENSMUST00000034245 Gcc2Q8CHG3 1679 aa25.08■■□□□ 1.61
Usb1-201ENSMUST00000034245 Cdc42bpaQ3UU96 1719 aa25.06■■□□□ 1.6
Usb1-201ENSMUST00000034245 PtprtQ99M80 1454 aa25.05■■□□□ 1.6
Usb1-201ENSMUST00000034245 Prex2Q3LAC4 1598 aa25.05■■□□□ 1.6
Usb1-201ENSMUST00000034245 Cep170Q6A065 1588 aa25.04■■□□□ 1.6
Usb1-201ENSMUST00000034245 NhsB1AV60 1647 aa25■■□□□ 1.59
Usb1-201ENSMUST00000034245 Wdr7Q920I9 1489 aa24.99■■□□□ 1.59
Usb1-201ENSMUST00000034245 Kiaa1210E9Q0C6 1637 aa24.99■■□□□ 1.59
Usb1-201ENSMUST00000034245 Fam50aQ9WV03 339 aaKnown RBP24.98■■□□□ 1.59
Usb1-201ENSMUST00000034245 AI481877A2ALV5 1481 aa24.97■■□□□ 1.59
Usb1-201ENSMUST00000034245 Cdk11bP24788 784 aaKnown RBP24.95■■□□□ 1.59
Usb1-201ENSMUST00000034245 Mlh3A0A1Y7VMP7 1443 aa24.95■■□□□ 1.58
Usb1-201ENSMUST00000034245 Cul7Q8VE73 1689 aa24.94■■□□□ 1.58
Usb1-201ENSMUST00000034245 A2mQ6GQT1 1474 aa24.94■■□□□ 1.58
Usb1-201ENSMUST00000034245 Gm156Q58A37 223 aa24.93■■□□□ 1.58
Usb1-201ENSMUST00000034245 Atp10dQ8K2X1 1416 aa24.93■■□□□ 1.58
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms