RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Carmil1Q6EDY6 1374 aa31.44■■■□□ 2.62
Trim47-201ENSMUST00000021120 Pla2r1Q62028 1487 aa31.43■■■□□ 2.62
Trim47-201ENSMUST00000021120 Nup160Q9Z0W3 1402 aaKnown RBP31.41■■■□□ 2.62
Trim47-201ENSMUST00000021120 Rusc2Q80U22 1514 aa31.35■■■□□ 2.61
Trim47-201ENSMUST00000021120 Gpatch8A2A6A1 1505 aa31.32■■■□□ 2.6
Trim47-201ENSMUST00000021120 Cc2d2bA0A286YDU8 1405 aa31.3■■■□□ 2.6
Trim47-201ENSMUST00000021120 Polr1aO35134 1717 aaKnown RBP31.27■■■□□ 2.6
Trim47-201ENSMUST00000021120 EprsQ8CGC7 1512 aaKnown RBP31.24■■■□□ 2.59
Trim47-201ENSMUST00000021120 Supt5hO55201 1082 aaKnown RBP31.23■■■□□ 2.59
Trim47-201ENSMUST00000021120 Cux1P53564 1515 aa31.19■■■□□ 2.58
Trim47-201ENSMUST00000021120 Ankrd26Q811D2 1581 aa31.17■■■□□ 2.58
Trim47-201ENSMUST00000021120 Eea1Q8BL66 1411 aa31.17■■■□□ 2.58
Trim47-201ENSMUST00000021120 Adamts12Q811B3 1600 aa31.14■■■□□ 2.58
Trim47-201ENSMUST00000021120 WizO88286 1684 aaKnown RBP31.13■■■□□ 2.57
Trim47-201ENSMUST00000021120 Setd5Q5XJV7 1441 aa31.12■■■□□ 2.57
Trim47-201ENSMUST00000021120 Erich3F6QRE9 1637 aa31.11■■■□□ 2.57
Trim47-201ENSMUST00000021120 Rpap1Q80TE0 1409 aa31.1■■■□□ 2.57
Trim47-201ENSMUST00000021120 TchhA0A0B4J1F9 1599 aa31.1■■■□□ 2.57
Trim47-201ENSMUST00000021120 Fyco1Q8VDC1 1437 aa31.1■■■□□ 2.57
Trim47-201ENSMUST00000021120 Abca16E9PWJ7 1678 aa31.07■■■□□ 2.56
Trim47-201ENSMUST00000021120 CadpsQ80TJ1 1355 aa31.02■■■□□ 2.56
Trim47-201ENSMUST00000021120 Gm7298A0A0N4SVU1 1476 aa31■■■□□ 2.55
Trim47-201ENSMUST00000021120 Abca5Q8K448 1642 aa31■■■□□ 2.55
Trim47-201ENSMUST00000021120 Arap1Q4LDD4 1452 aa31■■■□□ 2.55
Trim47-201ENSMUST00000021120 PxdnQ3UQ28 1475 aa30.99■■■□□ 2.55
Trim47-201ENSMUST00000021120 Lmo7E9PYF4 1699 aaKnown RBP30.94■■■□□ 2.54
Trim47-201ENSMUST00000021120 Pcf11G3X9Z4 1553 aa30.92■■■□□ 2.54
Trim47-201ENSMUST00000021120 Soga1E1U8D0 1418 aa30.9■■■□□ 2.54
Trim47-201ENSMUST00000021120 Ap3b1Q9Z1T1 1105 aa30.89■■■□□ 2.54
Trim47-201ENSMUST00000021120 Arhgef5E9Q7D5 1581 aa30.89■■■□□ 2.54
Trim47-201ENSMUST00000021120 Abcc2Q8VI47 1543 aa30.88■■■□□ 2.53
Trim47-201ENSMUST00000021120 Arhgap27A2AB59 869 aa30.83■■■□□ 2.53
Trim47-201ENSMUST00000021120 Fgd6Q69ZL1 1399 aa30.8■■■□□ 2.52
Trim47-201ENSMUST00000021120 NefmP08553 848 aa30.77■■■□□ 2.52
Trim47-201ENSMUST00000021120 Map3k4O08648 1597 aa30.76■■■□□ 2.52
Trim47-201ENSMUST00000021120 Dnmt1P13864 1620 aaKnown RBP30.76■■■□□ 2.51
Trim47-201ENSMUST00000021120 Aebp1Q640N1 1128 aa30.75■■■□□ 2.51
Trim47-201ENSMUST00000021120 BlmO88700 1416 aa30.74■■■□□ 2.51
Trim47-201ENSMUST00000021120 Neurod1Q60867 357 aa30.73■■■□□ 2.51
Trim47-201ENSMUST00000021120 Tiam1Q60610 1591 aa30.73■■■□□ 2.51
Trim47-201ENSMUST00000021120 Shroom2A2ALU4 1481 aa30.71■■■□□ 2.51
Trim47-201ENSMUST00000021120 Plekhg3Q4VAC9 1341 aa30.7■■■□□ 2.51
Trim47-201ENSMUST00000021120 CntlnA2AM05 1397 aa30.69■■■□□ 2.5
Trim47-201ENSMUST00000021120 BC005561E9Q5E2 1589 aa30.69■■■□□ 2.5
Trim47-201ENSMUST00000021120 WrnO09053 1401 aa30.68■■■□□ 2.5
Trim47-201ENSMUST00000021120 AknaQ80VW7 1404 aa30.68■■■□□ 2.5
Trim47-201ENSMUST00000021120 Slx4Q6P1D7 1565 aa30.65■■■□□ 2.5
Trim47-201ENSMUST00000021120 Naip1Q9QWK5 1403 aa30.65■■■□□ 2.5
Trim47-201ENSMUST00000021120 Peg3Q3URU2 1571 aa30.63■■■□□ 2.49
Trim47-201ENSMUST00000021120 Neo1P97798 1493 aa30.63■■■□□ 2.49
Trim47-201ENSMUST00000021120 Las1lA2BE28 776 aaKnown RBP30.61■■■□□ 2.49
Trim47-201ENSMUST00000021120 Kif27Q7M6Z4 1394 aa30.57■■■□□ 2.48
Trim47-201ENSMUST00000021120 Mier1Q5UAK0 511 aa30.52■■■□□ 2.48
Trim47-201ENSMUST00000021120 Abcc1O35379 1528 aa30.49■■■□□ 2.47
Trim47-201ENSMUST00000021120 Zcchc11B2RX14 1644 aaKnown RBP30.46■■■□□ 2.47
Trim47-201ENSMUST00000021120 Rapgef6Q5NCJ1 1609 aa30.46■■■□□ 2.47
Trim47-201ENSMUST00000021120 Chd1P40201 1711 aa30.46■■■□□ 2.47
Trim47-201ENSMUST00000021120 Arhgef12Q8R4H2 1543 aaKnown RBP30.46■■■□□ 2.47
Trim47-201ENSMUST00000021120 Lmod2Q3UHZ5 550 aa30.45■■■□□ 2.47
Trim47-201ENSMUST00000021120 Gm1043A0A140LJC2 1431 aa30.45■■■□□ 2.46
Trim47-201ENSMUST00000021120 UbtfP25976 765 aaKnown RBP30.44■■■□□ 2.46
Trim47-201ENSMUST00000021120 Pelp1Q9DBD5 1123 aaKnown RBP30.43■■■□□ 2.46
Trim47-201ENSMUST00000021120 Gm14025A2AP89 1413 aa30.43■■■□□ 2.46
Trim47-201ENSMUST00000021120 Rrbp1Q99PL5 1605 aaKnown RBP30.41■■■□□ 2.46
Trim47-201ENSMUST00000021120 Jph4Q80WT0 628 aa30.41■■■□□ 2.46
Trim47-201ENSMUST00000021120 Pabpn1Q8CCS6 302 aaKnown RBP30.41■■■□□ 2.46
Trim47-201ENSMUST00000021120 Arhgap31A6X8Z5 1425 aa30.4■■■□□ 2.46
Trim47-201ENSMUST00000021120 Ccdc141E9Q8Q6 1531 aa30.37■■■□□ 2.45
Trim47-201ENSMUST00000021120 Myt1Q8CFC2 1127 aa30.35■■■□□ 2.45
Trim47-201ENSMUST00000021120 Ncoa2Q61026 1462 aa30.31■■■□□ 2.44
Trim47-201ENSMUST00000021120 Sall2Q9QX96 1004 aa30.31■■■□□ 2.44
Trim47-201ENSMUST00000021120 Arhgef11Q68FM7 1552 aa30.28■■■□□ 2.44
Trim47-201ENSMUST00000021120 Mroh2aD3Z750 1679 aa30.25■■■□□ 2.43
Trim47-201ENSMUST00000021120 Mug1P28665 1476 aa30.24■■■□□ 2.43
Trim47-201ENSMUST00000021120 NexmifQ5DTT1 1515 aa30.22■■■□□ 2.43
Trim47-201ENSMUST00000021120 Fkbp15Q6P9Q6 1216 aaKnown RBP30.22■■■□□ 2.43
Trim47-201ENSMUST00000021120 Gapvd1Q6PAR5 1458 aa30.21■■■□□ 2.43
Trim47-201ENSMUST00000021120 Ncoa3O09000 1398 aa30.2■■■□□ 2.43
Trim47-201ENSMUST00000021120 Ythdc2B2RR83 1445 aaKnown RBP30.18■■■□□ 2.42
Trim47-201ENSMUST00000021120 Magi1Q6RHR9 1471 aa30.18■■■□□ 2.42
Trim47-201ENSMUST00000021120 Lmtk2Q3TYD6 1471 aa30.17■■■□□ 2.42
Trim47-201ENSMUST00000021120 Cdc42bpaQ3UU96 1719 aa30.14■■■□□ 2.42
Trim47-201ENSMUST00000021120 Kdm5bQ80Y84 1544 aa30.14■■■□□ 2.42
Trim47-201ENSMUST00000021120 Dhx57Q6P5D3 1388 aaKnown RBP30.13■■■□□ 2.41
Trim47-201ENSMUST00000021120 Gcc2Q8CHG3 1679 aa30.13■■■□□ 2.41
Trim47-201ENSMUST00000021120 Cep170Q6A065 1588 aa30.12■■■□□ 2.41
Trim47-201ENSMUST00000021120 Ccnb3Q810T2 1396 aa30.11■■■□□ 2.41
Trim47-201ENSMUST00000021120 Kiaa1551Q5DTW7 1521 aa30.1■■■□□ 2.41
Trim47-201ENSMUST00000021120 Anks4bQ8K3X6 423 aa30.1■■■□□ 2.41
Trim47-201ENSMUST00000021120 PtprtQ99M80 1454 aa30.08■■■□□ 2.41
Trim47-201ENSMUST00000021120 Cul7Q8VE73 1689 aa30.08■■■□□ 2.41
Trim47-201ENSMUST00000021120 Prex2Q3LAC4 1598 aa30.07■■■□□ 2.4
Trim47-201ENSMUST00000021120 Fancd2Q80V62 1450 aa30.07■■■□□ 2.4
Trim47-201ENSMUST00000021120 Fam163aQ8CAA5 168 aa30.05■■■□□ 2.4
Trim47-201ENSMUST00000021120 Ncapd3Q6ZQK0 1506 aa30.03■■■□□ 2.4
Trim47-201ENSMUST00000021120 NhsB1AV60 1647 aa30.03■■■□□ 2.4
Trim47-201ENSMUST00000021120 Mapkbp1Q6NS57 1503 aa30.02■■■□□ 2.4
Trim47-201ENSMUST00000021120 3425401B19RikD3Z1D3 1412 aa29.98■■■□□ 2.39
Trim47-201ENSMUST00000021120 CenpbP27790 599 aa29.98■■■□□ 2.39
Trim47-201ENSMUST00000021120 Kiaa1210E9Q0C6 1637 aa29.96■■■□□ 2.39
Retrieved 100 of 22,080 RNA–protein pairs in 8.6 ms