RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Gm35339A0A140LHH9 1649 aa42.35■■■■■ 4.37
Trim47-201ENSMUST00000021120 NischQ80TM9 1593 aa42.26■■■■■ 4.36
Trim47-201ENSMUST00000021120 Abcc9P70170 1546 aa40.99■■■■■ 4.15
Trim47-201ENSMUST00000021120 Abcc8B2RUS7 1588 aa40.52■■■■■ 4.08
Trim47-201ENSMUST00000021120 ScribQ80U72 1612 aa38.52■■■■□ 3.76
Trim47-201ENSMUST00000021120 Dcaf1Q80TR8 1506 aa37.58■■■■□ 3.61
Trim47-201ENSMUST00000021120 Rhox8Q6VSS7 320 aa37.55■■■■□ 3.6
Trim47-201ENSMUST00000021120 Kdm5dQ62240 1548 aa37.49■■■■□ 3.59
Trim47-201ENSMUST00000021120 NacadQ5SWP3 1504 aa37.41■■■■□ 3.58
Trim47-201ENSMUST00000021120 Rb1cc1Q9ESK9 1588 aa36.95■■■■□ 3.51
Trim47-201ENSMUST00000021120 Sycp2Q9CUU3 1500 aa36.62■■■■□ 3.45
Trim47-201ENSMUST00000021120 Ccdc180J3QNE4 1664 aa36.58■■■■□ 3.45
Trim47-201ENSMUST00000021120 Baz1aO88379 1555 aa36.47■■■■□ 3.43
Trim47-201ENSMUST00000021120 Crybg2B7ZCC2 1516 aa36.1■■■■□ 3.37
Trim47-201ENSMUST00000021120 BicraF8VPZ9 1578 aa35.97■■■■□ 3.35
Trim47-201ENSMUST00000021120 Rtl1Q7M732 1744 aa35.93■■■■□ 3.34
Trim47-201ENSMUST00000021120 Zcchc6Q5BLK4 1491 aaKnown RBP35.8■■■■□ 3.32
Trim47-201ENSMUST00000021120 Smarca2Q6DIC0 1577 aa35.51■■■■□ 3.28
Trim47-201ENSMUST00000021120 Ccdc136Q3TVA9 1136 aa34.96■■■■□ 3.19
Trim47-201ENSMUST00000021120 Cecr2E9Q2Z1 1453 aa34.95■■■■□ 3.19
Trim47-201ENSMUST00000021120 Smarca4Q3TKT4 1613 aaKnown RBP34.77■■■■□ 3.16
Trim47-201ENSMUST00000021120 Pds5bQ4VA53 1446 aaKnown RBP34.74■■■■□ 3.15
Trim47-201ENSMUST00000021120 Atad2bE9Q166 1460 aaKnown RBP34.61■■■■□ 3.13
Trim47-201ENSMUST00000021120 Brd4Q9ESU6 1400 aaKnown RBP34.58■■■■□ 3.13
Trim47-201ENSMUST00000021120 Iqgap2Q3UQ44 1575 aa34.45■■■■□ 3.11
Trim47-201ENSMUST00000021120 Trim41Q5NCC3 630 aa34.44■■■■□ 3.1
Trim47-201ENSMUST00000021120 Synj1Q8CHC4 1574 aa34.42■■■■□ 3.1
Trim47-201ENSMUST00000021120 CftrP26361 1476 aa34.36■■■■□ 3.09
Trim47-201ENSMUST00000021120 Cttnbp2B9EJA2 1648 aa34.34■■■■□ 3.09
Trim47-201ENSMUST00000021120 Ercc6F8VPZ5 1481 aa34.09■■■■□ 3.05
Trim47-201ENSMUST00000021120 Thoc2B1AZI6 1594 aaKnown RBP34.08■■■■□ 3.05
Trim47-201ENSMUST00000021120 Wdr62Q3U3T8 1523 aa33.98■■■■□ 3.03
Trim47-201ENSMUST00000021120 Rpgrip1Q9EPQ2 1331 aa33.95■■■■□ 3.03
Trim47-201ENSMUST00000021120 Frmpd1A2AKB4 1549 aa33.91■■■■□ 3.02
Trim47-201ENSMUST00000021120 Esf1Q3V1V3 845 aaKnown RBP33.87■■■■□ 3.01
Trim47-201ENSMUST00000021120 Golga3P55937 1487 aa33.71■■■□□ 2.99
Trim47-201ENSMUST00000021120 Cc2d2aQ8CFW7 1633 aa33.62■■■□□ 2.97
Trim47-201ENSMUST00000021120 Cngb1E1AZ71 1325 aa33.61■■■□□ 2.97
Trim47-201ENSMUST00000021120 Top2bQ64511 1612 aa33.56■■■□□ 2.96
Trim47-201ENSMUST00000021120 Unc13aQ4KUS2 1712 aa33.56■■■□□ 2.96
Trim47-201ENSMUST00000021120 Fam135aQ6NS59 1506 aa33.51■■■□□ 2.96
Trim47-201ENSMUST00000021120 Phldb1Q6PDH0 1371 aaKnown RBP33.48■■■□□ 2.95
Trim47-201ENSMUST00000021120 Dnajc5bQ9CQ94 199 aa33.46■■■□□ 2.95
Trim47-201ENSMUST00000021120 HrcG5E8J6 738 aa33.33■■■□□ 2.93
Trim47-201ENSMUST00000021120 Rsf1E9PWW9 1441 aaKnown RBP33.2■■■□□ 2.91
Trim47-201ENSMUST00000021120 Fmn1Q05860 1466 aa33.13■■■□□ 2.89
Trim47-201ENSMUST00000021120 Ubl4bQ9CQ84 188 aa33.13■■■□□ 2.89
Trim47-201ENSMUST00000021120 Lamc3Q9R0B6 1581 aa33.12■■■□□ 2.89
Trim47-201ENSMUST00000021120 Baz1bQ9Z277 1479 aa33.09■■■□□ 2.89
Trim47-201ENSMUST00000021120 Ccdc88bQ4QRL3 1481 aa33.08■■■□□ 2.89
Trim47-201ENSMUST00000021120 Kif15Q6P9L6 1387 aa33.07■■■□□ 2.88
Trim47-201ENSMUST00000021120 TnnQ80Z71 1560 aa33.07■■■□□ 2.88
Trim47-201ENSMUST00000021120 Acin1Q9JIX8 1338 aaKnown RBP33.06■■■□□ 2.88
Trim47-201ENSMUST00000021120 Chic1Q8CBW7 227 aa32.94■■■□□ 2.86
Trim47-201ENSMUST00000021120 Cep164Q5DU05 1446 aa32.92■■■□□ 2.86
Trim47-201ENSMUST00000021120 Cux2P70298 1426 aa32.8■■■□□ 2.84
Trim47-201ENSMUST00000021120 Mrc2Q64449 1479 aa32.75■■■□□ 2.83
Trim47-201ENSMUST00000021120 Top2aQ01320 1528 aaKnown RBP32.72■■■□□ 2.83
Trim47-201ENSMUST00000021120 Camsap1A2AHC3 1581 aa32.68■■■□□ 2.82
Trim47-201ENSMUST00000021120 Ccdc18Q640L5 1455 aa32.67■■■□□ 2.82
Trim47-201ENSMUST00000021120 Il27Q8K3I6 234 aa32.56■■■□□ 2.8
Trim47-201ENSMUST00000021120 Npm1Q61937 292 aaKnown RBP32.53■■■□□ 2.8
Trim47-201ENSMUST00000021120 Gab3Q8BSM5 595 aa32.38■■■□□ 2.77
Trim47-201ENSMUST00000021120 Kif21aQ9QXL2 1672 aa32.37■■■□□ 2.77
Trim47-201ENSMUST00000021120 Grin2bQ01097 1482 aa32.31■■■□□ 2.76
Trim47-201ENSMUST00000021120 LrpprcQ6PB66 1392 aaKnown RBP32.3■■■□□ 2.76
Trim47-201ENSMUST00000021120 NrkQ9R0G8 1455 aa32.2■■■□□ 2.74
Trim47-201ENSMUST00000021120 Dhx29Q6PGC1 1365 aaKnown RBP32.19■■■□□ 2.74
Trim47-201ENSMUST00000021120 PogzQ8BZH4 1409 aaKnown RBP32.19■■■□□ 2.74
Trim47-201ENSMUST00000021120 Ehmt2Q9Z148 1263 aaKnown RBP32.16■■■□□ 2.74
Trim47-201ENSMUST00000021120 Rapgef2Q8CHG7 1496 aa32.12■■■□□ 2.73
Trim47-201ENSMUST00000021120 Shroom4Q1W617 1475 aa32.11■■■□□ 2.73
Trim47-201ENSMUST00000021120 Crocc2F6XLV1 1638 aa32.09■■■□□ 2.73
Trim47-201ENSMUST00000021120 PtprkP35822 1457 aa32.09■■■□□ 2.73
Trim47-201ENSMUST00000021120 Duox2A2AQ99 1517 aa32.08■■■□□ 2.73
Trim47-201ENSMUST00000021120 Npm2Q80W85 207 aa32.03■■■□□ 2.72
Trim47-201ENSMUST00000021120 Efcab5A0JP43 1406 aa32.01■■■□□ 2.72
Trim47-201ENSMUST00000021120 Lrriq1Q0P5X1 1673 aa32■■■□□ 2.71
Trim47-201ENSMUST00000021120 Pcgf6Q99NA9 353 aa32■■■□□ 2.71
Trim47-201ENSMUST00000021120 Cep162Q6ZQ06 1403 aa31.89■■■□□ 2.69
Trim47-201ENSMUST00000021120 Samd9lQ69Z37 1561 aa31.88■■■□□ 2.69
Trim47-201ENSMUST00000021120 Plb1Q3TTY0 1478 aa31.87■■■□□ 2.69
Trim47-201ENSMUST00000021120 Urb2E9Q7L1 1524 aaKnown RBP31.86■■■□□ 2.69
Trim47-201ENSMUST00000021120 Eif4g1Q6NZJ6 1600 aaKnown RBP31.84■■■□□ 2.69
Trim47-201ENSMUST00000021120 Arhgap35Q91YM2 1499 aa31.76■■■□□ 2.67
Trim47-201ENSMUST00000021120 Zeb1Q64318 1117 aa31.75■■■□□ 2.67
Trim47-201ENSMUST00000021120 Mroh2bQ7M6Y6 1581 aa31.72■■■□□ 2.67
Trim47-201ENSMUST00000021120 Map3k1P53349 1493 aa31.7■■■□□ 2.67
Trim47-201ENSMUST00000021120 SynmQ70IV5 1561 aa31.66■■■□□ 2.66
Trim47-201ENSMUST00000021120 Ift140E9PY46 1464 aa31.65■■■□□ 2.66
Trim47-201ENSMUST00000021120 Myt1lP97500 1187 aa31.64■■■□□ 2.66
Trim47-201ENSMUST00000021120 Rad54l2Q99NG0 1466 aa31.62■■■□□ 2.65
Trim47-201ENSMUST00000021120 Disp1Q3TDN0 1521 aa31.57■■■□□ 2.64
Trim47-201ENSMUST00000021120 Eif4g3Q80XI3 1579 aaKnown RBP31.54■■■□□ 2.64
Trim47-201ENSMUST00000021120 Pbrm1Q8BSQ9 1634 aaKnown RBP31.53■■■□□ 2.64
Trim47-201ENSMUST00000021120 AqrQ8CFQ3 1481 aaKnown RBP31.52■■■□□ 2.64
Trim47-201ENSMUST00000021120 Magi3Q9EQJ9 1476 aa31.49■■■□□ 2.63
Trim47-201ENSMUST00000021120 Grin2aP35436 1464 aa31.48■■■□□ 2.63
Trim47-201ENSMUST00000021120 Setd1bQ8CFT2 1985 aa31.47■■■□□ 2.63
Trim47-201ENSMUST00000021120 Clip1Q922J3 1391 aa31.46■■■□□ 2.63
Retrieved 100 of 22,080 RNA–protein pairs in 79.8 ms