RNA–Protein interactions for RNA: ENSMUST00000008004.9

Ddx49-201, Transcript of Probable ATP-dependent RNA helicase DDX49, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx49, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49-201ENSMUST00000008004 Cux1P53564 1515 aa24.23■■□□□ 1.47
Ddx49-201ENSMUST00000008004 EprsQ8CGC7 1512 aaKnown RBP24.2■■□□□ 1.47
Ddx49-201ENSMUST00000008004 Ankrd26Q811D2 1581 aa24.2■■□□□ 1.46
Ddx49-201ENSMUST00000008004 Rusc2Q80U22 1514 aa24.19■■□□□ 1.46
Ddx49-201ENSMUST00000008004 Gpatch8A2A6A1 1505 aa24.18■■□□□ 1.46
Ddx49-201ENSMUST00000008004 Cc2d2bA0A286YDU8 1405 aa24.17■■□□□ 1.46
Ddx49-201ENSMUST00000008004 Eea1Q8BL66 1411 aa24.17■■□□□ 1.46
Ddx49-201ENSMUST00000008004 Setd5Q5XJV7 1441 aa24.16■■□□□ 1.46
Ddx49-201ENSMUST00000008004 Polr1aO35134 1717 aaKnown RBP24.14■■□□□ 1.46
Ddx49-201ENSMUST00000008004 WizO88286 1684 aaKnown RBP24.12■■□□□ 1.45
Ddx49-201ENSMUST00000008004 Arap1Q4LDD4 1452 aa24.12■■□□□ 1.45
Ddx49-201ENSMUST00000008004 Erich3F6QRE9 1637 aa24.11■■□□□ 1.45
Ddx49-201ENSMUST00000008004 Adamts12Q811B3 1600 aa24.1■■□□□ 1.45
Ddx49-201ENSMUST00000008004 CadpsQ80TJ1 1355 aa24.07■■□□□ 1.44
Ddx49-201ENSMUST00000008004 Fyco1Q8VDC1 1437 aa24.07■■□□□ 1.44
Ddx49-201ENSMUST00000008004 Ap3b1Q9Z1T1 1105 aa24.07■■□□□ 1.44
Ddx49-201ENSMUST00000008004 Rpap1Q80TE0 1409 aa24.06■■□□□ 1.44
Ddx49-201ENSMUST00000008004 PxdnQ3UQ28 1475 aa24.05■■□□□ 1.44
Ddx49-201ENSMUST00000008004 Abca16E9PWJ7 1678 aa24.05■■□□□ 1.44
Ddx49-201ENSMUST00000008004 Gm7298A0A0N4SVU1 1476 aa24.03■■□□□ 1.44
Ddx49-201ENSMUST00000008004 TchhA0A0B4J1F9 1599 aa24.02■■□□□ 1.44
Ddx49-201ENSMUST00000008004 Lmo7E9PYF4 1699 aaKnown RBP24.01■■□□□ 1.43
Ddx49-201ENSMUST00000008004 Arhgef5E9Q7D5 1581 aa24■■□□□ 1.43
Ddx49-201ENSMUST00000008004 Abca5Q8K448 1642 aa24■■□□□ 1.43
Ddx49-201ENSMUST00000008004 Pcf11G3X9Z4 1553 aa23.98■■□□□ 1.43
Ddx49-201ENSMUST00000008004 Abcc2Q8VI47 1543 aa23.95■■□□□ 1.43
Ddx49-201ENSMUST00000008004 Soga1E1U8D0 1418 aa23.94■■□□□ 1.42
Ddx49-201ENSMUST00000008004 Plekhg3Q4VAC9 1341 aa23.93■■□□□ 1.42
Ddx49-201ENSMUST00000008004 Arhgap27A2AB59 869 aa23.91■■□□□ 1.42
Ddx49-201ENSMUST00000008004 Aebp1Q640N1 1128 aa23.91■■□□□ 1.42
Ddx49-201ENSMUST00000008004 Tiam1Q60610 1591 aa23.85■■□□□ 1.41
Ddx49-201ENSMUST00000008004 Naip1Q9QWK5 1403 aa23.84■■□□□ 1.41
Ddx49-201ENSMUST00000008004 BlmO88700 1416 aa23.83■■□□□ 1.4
Ddx49-201ENSMUST00000008004 Slx4Q6P1D7 1565 aa23.82■■□□□ 1.4
Ddx49-201ENSMUST00000008004 CntlnA2AM05 1397 aa23.81■■□□□ 1.4
Ddx49-201ENSMUST00000008004 Shroom2A2ALU4 1481 aa23.8■■□□□ 1.4
Ddx49-201ENSMUST00000008004 Dnmt1P13864 1620 aaKnown RBP23.8■■□□□ 1.4
Ddx49-201ENSMUST00000008004 Fgd6Q69ZL1 1399 aa23.8■■□□□ 1.4
Ddx49-201ENSMUST00000008004 WrnO09053 1401 aa23.79■■□□□ 1.4
Ddx49-201ENSMUST00000008004 Map3k4O08648 1597 aa23.79■■□□□ 1.4
Ddx49-201ENSMUST00000008004 BC005561E9Q5E2 1589 aa23.76■■□□□ 1.39
Ddx49-201ENSMUST00000008004 UbtfP25976 765 aaKnown RBP23.74■■□□□ 1.39
Ddx49-201ENSMUST00000008004 AknaQ80VW7 1404 aa23.72■■□□□ 1.39
Ddx49-201ENSMUST00000008004 Peg3Q3URU2 1571 aa23.71■■□□□ 1.39
Ddx49-201ENSMUST00000008004 Neo1P97798 1493 aa23.7■■□□□ 1.38
Ddx49-201ENSMUST00000008004 Lmod2Q3UHZ5 550 aa23.7■■□□□ 1.38
Ddx49-201ENSMUST00000008004 Kif27Q7M6Z4 1394 aa23.69■■□□□ 1.38
Ddx49-201ENSMUST00000008004 Gm1043A0A140LJC2 1431 aa23.67■■□□□ 1.38
Ddx49-201ENSMUST00000008004 Zcchc11B2RX14 1644 aaKnown RBP23.65■■□□□ 1.38
Ddx49-201ENSMUST00000008004 Jph4Q80WT0 628 aa23.58■■□□□ 1.37
Ddx49-201ENSMUST00000008004 Rapgef6Q5NCJ1 1609 aa23.58■■□□□ 1.36
Ddx49-201ENSMUST00000008004 Acin1Q9JIX8 1338 aaKnown RBP23.57■■□□□ 1.36
Ddx49-201ENSMUST00000008004 Abcc1O35379 1528 aa23.57■■□□□ 1.36
Ddx49-201ENSMUST00000008004 Arhgef12Q8R4H2 1543 aaKnown RBP23.56■■□□□ 1.36
Ddx49-201ENSMUST00000008004 Arhgap31A6X8Z5 1425 aa23.55■■□□□ 1.36
Ddx49-201ENSMUST00000008004 Chd1P40201 1711 aa23.54■■□□□ 1.36
Ddx49-201ENSMUST00000008004 Gm14025A2AP89 1413 aa23.51■■□□□ 1.35
Ddx49-201ENSMUST00000008004 Pelp1Q9DBD5 1123 aaKnown RBP23.5■■□□□ 1.35
Ddx49-201ENSMUST00000008004 Ncoa3O09000 1398 aa23.49■■□□□ 1.35
Ddx49-201ENSMUST00000008004 Mier1Q5UAK0 511 aa23.48■■□□□ 1.35
Ddx49-201ENSMUST00000008004 Rrbp1Q99PL5 1605 aaKnown RBP23.47■■□□□ 1.35
Ddx49-201ENSMUST00000008004 Ccdc141E9Q8Q6 1531 aa23.47■■□□□ 1.35
Ddx49-201ENSMUST00000008004 Arhgef11Q68FM7 1552 aa23.47■■□□□ 1.35
Ddx49-201ENSMUST00000008004 Pabpn1Q8CCS6 302 aaKnown RBP23.47■■□□□ 1.35
Ddx49-201ENSMUST00000008004 Fkbp15Q6P9Q6 1216 aaKnown RBP23.46■■□□□ 1.35
Ddx49-201ENSMUST00000008004 Mug1P28665 1476 aa23.46■■□□□ 1.35
Ddx49-201ENSMUST00000008004 Mroh2aD3Z750 1679 aa23.46■■□□□ 1.35
Ddx49-201ENSMUST00000008004 NexmifQ5DTT1 1515 aa23.43■■□□□ 1.34
Ddx49-201ENSMUST00000008004 Ncapd3Q6ZQK0 1506 aa23.42■■□□□ 1.34
Ddx49-201ENSMUST00000008004 Lmtk2Q3TYD6 1471 aa23.41■■□□□ 1.34
Ddx49-201ENSMUST00000008004 Ncoa2Q61026 1462 aa23.41■■□□□ 1.34
Ddx49-201ENSMUST00000008004 Ccnb3Q810T2 1396 aa23.38■■□□□ 1.33
Ddx49-201ENSMUST00000008004 3425401B19RikD3Z1D3 1412 aa23.38■■□□□ 1.33
Ddx49-201ENSMUST00000008004 Cdc42bpaQ3UU96 1719 aa23.38■■□□□ 1.33
Ddx49-201ENSMUST00000008004 Magi1Q6RHR9 1471 aa23.38■■□□□ 1.33
Ddx49-201ENSMUST00000008004 Ythdc2B2RR83 1445 aaKnown RBP23.36■■□□□ 1.33
Ddx49-201ENSMUST00000008004 Kiaa1551Q5DTW7 1521 aa23.35■■□□□ 1.33
Ddx49-201ENSMUST00000008004 Gapvd1Q6PAR5 1458 aa23.33■■□□□ 1.33
Ddx49-201ENSMUST00000008004 Gcc2Q8CHG3 1679 aa23.32■■□□□ 1.32
Ddx49-201ENSMUST00000008004 Kdm5bQ80Y84 1544 aa23.31■■□□□ 1.32
Ddx49-201ENSMUST00000008004 Prex2Q3LAC4 1598 aa23.31■■□□□ 1.32
Ddx49-201ENSMUST00000008004 PtprtQ99M80 1454 aa23.31■■□□□ 1.32
Ddx49-201ENSMUST00000008004 Fam163aQ8CAA5 168 aa23.3■■□□□ 1.32
Ddx49-201ENSMUST00000008004 Cul7Q8VE73 1689 aa23.29■■□□□ 1.32
Ddx49-201ENSMUST00000008004 Mapkbp1Q6NS57 1503 aa23.27■■□□□ 1.32
Ddx49-201ENSMUST00000008004 Dhx57Q6P5D3 1388 aaKnown RBP23.27■■□□□ 1.32
Ddx49-201ENSMUST00000008004 Fancd2Q80V62 1450 aa23.27■■□□□ 1.32
Ddx49-201ENSMUST00000008004 Cep170Q6A065 1588 aa23.24■■□□□ 1.31
Ddx49-201ENSMUST00000008004 NhsB1AV60 1647 aa23.22■■□□□ 1.31
Ddx49-201ENSMUST00000008004 Arhgef40Q3UPH7 1517 aa23.2■■□□□ 1.3
Ddx49-201ENSMUST00000008004 A2mQ6GQT1 1474 aa23.19■■□□□ 1.3
Ddx49-201ENSMUST00000008004 Adcy10Q8C0T9 1614 aa23.18■■□□□ 1.3
Ddx49-201ENSMUST00000008004 Ifnlr1Q8CGK5 535 aa23.15■■□□□ 1.3
Ddx49-201ENSMUST00000008004 Rpgrip1Q9EPQ2 1331 aa23.15■■□□□ 1.3
Ddx49-201ENSMUST00000008004 Fam50aQ9WV03 339 aaKnown RBP23.15■■□□□ 1.3
Ddx49-201ENSMUST00000008004 Fam208aQ69ZR9 1610 aaKnown RBP23.15■■□□□ 1.3
Ddx49-201ENSMUST00000008004 Kdm6bQ5NCY0 1641 aa23.13■■□□□ 1.29
Ddx49-201ENSMUST00000008004 Igf1rQ60751 1373 aa23.13■■□□□ 1.29
Ddx49-201ENSMUST00000008004 Znf608Q56A10 1511 aa23.13■■□□□ 1.29
Ddx49-201ENSMUST00000008004 Kiaa1210E9Q0C6 1637 aa23.12■■□□□ 1.29
Retrieved 100 of 22,080 RNA–protein pairs in 9.8 ms