RNA–Protein interactions for RNA: ENSMUST00000008004.9

Ddx49-201, Transcript of Probable ATP-dependent RNA helicase DDX49, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx49, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49-201ENSMUST00000008004 Gm35339A0A140LHH9 1649 aa32.75■■■□□ 2.83
Ddx49-201ENSMUST00000008004 NischQ80TM9 1593 aa32.74■■■□□ 2.83
Ddx49-201ENSMUST00000008004 Abcc9P70170 1546 aa31.75■■■□□ 2.67
Ddx49-201ENSMUST00000008004 Abcc8B2RUS7 1588 aa31.41■■■□□ 2.62
Ddx49-201ENSMUST00000008004 ScribQ80U72 1612 aa29.84■■■□□ 2.37
Ddx49-201ENSMUST00000008004 Rhox8Q6VSS7 320 aa29.18■■■□□ 2.26
Ddx49-201ENSMUST00000008004 Dcaf1Q80TR8 1506 aa29.07■■■□□ 2.24
Ddx49-201ENSMUST00000008004 Kdm5dQ62240 1548 aa29.02■■■□□ 2.24
Ddx49-201ENSMUST00000008004 NacadQ5SWP3 1504 aa28.92■■■□□ 2.22
Ddx49-201ENSMUST00000008004 Rb1cc1Q9ESK9 1588 aa28.61■■■□□ 2.17
Ddx49-201ENSMUST00000008004 Sycp2Q9CUU3 1500 aa28.34■■■□□ 2.13
Ddx49-201ENSMUST00000008004 Ccdc180J3QNE4 1664 aa28.25■■■□□ 2.11
Ddx49-201ENSMUST00000008004 Baz1aO88379 1555 aa28.23■■■□□ 2.11
Ddx49-201ENSMUST00000008004 Crybg2B7ZCC2 1516 aa27.94■■■□□ 2.06
Ddx49-201ENSMUST00000008004 BicraF8VPZ9 1578 aa27.88■■■□□ 2.05
Ddx49-201ENSMUST00000008004 Rtl1Q7M732 1744 aa27.79■■■□□ 2.04
Ddx49-201ENSMUST00000008004 Zcchc6Q5BLK4 1491 aaKnown RBP27.73■■■□□ 2.03
Ddx49-201ENSMUST00000008004 Smarca2Q6DIC0 1577 aa27.52■■■□□ 2
Ddx49-201ENSMUST00000008004 Ccdc136Q3TVA9 1136 aa27.23■■□□□ 1.95
Ddx49-201ENSMUST00000008004 Cecr2E9Q2Z1 1453 aa27.17■■□□□ 1.94
Ddx49-201ENSMUST00000008004 Smarca4Q3TKT4 1613 aaKnown RBP26.88■■□□□ 1.89
Ddx49-201ENSMUST00000008004 Pds5bQ4VA53 1446 aaKnown RBP26.8■■□□□ 1.88
Ddx49-201ENSMUST00000008004 Atad2bE9Q166 1460 aaKnown RBP26.75■■□□□ 1.87
Ddx49-201ENSMUST00000008004 Brd4Q9ESU6 1400 aaKnown RBP26.75■■□□□ 1.87
Ddx49-201ENSMUST00000008004 Trim41Q5NCC3 630 aa26.71■■□□□ 1.87
Ddx49-201ENSMUST00000008004 Synj1Q8CHC4 1574 aa26.7■■□□□ 1.87
Ddx49-201ENSMUST00000008004 CftrP26361 1476 aa26.64■■□□□ 1.86
Ddx49-201ENSMUST00000008004 Iqgap2Q3UQ44 1575 aa26.64■■□□□ 1.85
Ddx49-201ENSMUST00000008004 Cttnbp2B9EJA2 1648 aa26.55■■□□□ 1.84
Ddx49-201ENSMUST00000008004 Thoc2B1AZI6 1594 aaKnown RBP26.31■■□□□ 1.8
Ddx49-201ENSMUST00000008004 Frmpd1A2AKB4 1549 aa26.27■■□□□ 1.8
Ddx49-201ENSMUST00000008004 Wdr62Q3U3T8 1523 aa26.27■■□□□ 1.8
Ddx49-201ENSMUST00000008004 Ercc6F8VPZ5 1481 aa26.26■■□□□ 1.79
Ddx49-201ENSMUST00000008004 Esf1Q3V1V3 845 aaKnown RBP26.24■■□□□ 1.79
Ddx49-201ENSMUST00000008004 Golga3P55937 1487 aa26.15■■□□□ 1.78
Ddx49-201ENSMUST00000008004 Cngb1E1AZ71 1325 aa26.11■■□□□ 1.77
Ddx49-201ENSMUST00000008004 Top2bQ64511 1612 aa26.03■■□□□ 1.76
Ddx49-201ENSMUST00000008004 Dnajc5bQ9CQ94 199 aa26■■□□□ 1.75
Ddx49-201ENSMUST00000008004 Unc13aQ4KUS2 1712 aa25.99■■□□□ 1.75
Ddx49-201ENSMUST00000008004 Cc2d2aQ8CFW7 1633 aa25.97■■□□□ 1.75
Ddx49-201ENSMUST00000008004 HrcG5E8J6 738 aa25.97■■□□□ 1.75
Ddx49-201ENSMUST00000008004 Phldb1Q6PDH0 1371 aaKnown RBP25.87■■□□□ 1.73
Ddx49-201ENSMUST00000008004 Fam135aQ6NS59 1506 aa25.86■■□□□ 1.73
Ddx49-201ENSMUST00000008004 Rsf1E9PWW9 1441 aaKnown RBP25.81■■□□□ 1.72
Ddx49-201ENSMUST00000008004 Ccdc88bQ4QRL3 1481 aa25.77■■□□□ 1.72
Ddx49-201ENSMUST00000008004 Chic1Q8CBW7 227 aa25.73■■□□□ 1.71
Ddx49-201ENSMUST00000008004 Ubl4bQ9CQ84 188 aa25.66■■□□□ 1.7
Ddx49-201ENSMUST00000008004 Fmn1Q05860 1466 aa25.65■■□□□ 1.7
Ddx49-201ENSMUST00000008004 Lamc3Q9R0B6 1581 aa25.64■■□□□ 1.7
Ddx49-201ENSMUST00000008004 TnnQ80Z71 1560 aa25.61■■□□□ 1.69
Ddx49-201ENSMUST00000008004 Kif15Q6P9L6 1387 aa25.6■■□□□ 1.69
Ddx49-201ENSMUST00000008004 Cep164Q5DU05 1446 aa25.58■■□□□ 1.68
Ddx49-201ENSMUST00000008004 Baz1bQ9Z277 1479 aa25.4■■□□□ 1.66
Ddx49-201ENSMUST00000008004 Cux2P70298 1426 aa25.39■■□□□ 1.66
Ddx49-201ENSMUST00000008004 Top2aQ01320 1528 aaKnown RBP25.37■■□□□ 1.65
Ddx49-201ENSMUST00000008004 Camsap1A2AHC3 1581 aa25.3■■□□□ 1.64
Ddx49-201ENSMUST00000008004 Il27Q8K3I6 234 aa25.27■■□□□ 1.64
Ddx49-201ENSMUST00000008004 Mrc2Q64449 1479 aa25.27■■□□□ 1.64
Ddx49-201ENSMUST00000008004 Gab3Q8BSM5 595 aa25.24■■□□□ 1.63
Ddx49-201ENSMUST00000008004 Ccdc18Q640L5 1455 aa25.22■■□□□ 1.63
Ddx49-201ENSMUST00000008004 Npm1Q61937 292 aaKnown RBP25.17■■□□□ 1.62
Ddx49-201ENSMUST00000008004 Grin2bQ01097 1482 aa25.03■■□□□ 1.6
Ddx49-201ENSMUST00000008004 Kif21aQ9QXL2 1672 aa25.02■■□□□ 1.6
Ddx49-201ENSMUST00000008004 LrpprcQ6PB66 1392 aaKnown RBP25.01■■□□□ 1.59
Ddx49-201ENSMUST00000008004 PtprkP35822 1457 aa24.97■■□□□ 1.59
Ddx49-201ENSMUST00000008004 Rapgef2Q8CHG7 1496 aa24.97■■□□□ 1.59
Ddx49-201ENSMUST00000008004 NrkQ9R0G8 1455 aa24.94■■□□□ 1.58
Ddx49-201ENSMUST00000008004 PogzQ8BZH4 1409 aaKnown RBP24.93■■□□□ 1.58
Ddx49-201ENSMUST00000008004 Dhx29Q6PGC1 1365 aaKnown RBP24.92■■□□□ 1.58
Ddx49-201ENSMUST00000008004 Shroom4Q1W617 1475 aa24.88■■□□□ 1.57
Ddx49-201ENSMUST00000008004 Duox2A2AQ99 1517 aa24.86■■□□□ 1.57
Ddx49-201ENSMUST00000008004 Npm2Q80W85 207 aa24.83■■□□□ 1.57
Ddx49-201ENSMUST00000008004 Efcab5A0JP43 1406 aa24.8■■□□□ 1.56
Ddx49-201ENSMUST00000008004 Cep162Q6ZQ06 1403 aa24.79■■□□□ 1.56
Ddx49-201ENSMUST00000008004 Crocc2F6XLV1 1638 aa24.79■■□□□ 1.56
Ddx49-201ENSMUST00000008004 Eif4g1Q6NZJ6 1600 aaKnown RBP24.75■■□□□ 1.55
Ddx49-201ENSMUST00000008004 Lrriq1Q0P5X1 1673 aa24.71■■□□□ 1.55
Ddx49-201ENSMUST00000008004 Samd9lQ69Z37 1561 aa24.7■■□□□ 1.54
Ddx49-201ENSMUST00000008004 Plb1Q3TTY0 1478 aa24.69■■□□□ 1.54
Ddx49-201ENSMUST00000008004 Arhgap35Q91YM2 1499 aa24.68■■□□□ 1.54
Ddx49-201ENSMUST00000008004 Urb2E9Q7L1 1524 aaKnown RBP24.67■■□□□ 1.54
Ddx49-201ENSMUST00000008004 Mroh2bQ7M6Y6 1581 aa24.61■■□□□ 1.53
Ddx49-201ENSMUST00000008004 Myt1lP97500 1187 aa24.61■■□□□ 1.53
Ddx49-201ENSMUST00000008004 Zeb1Q64318 1117 aa24.57■■□□□ 1.52
Ddx49-201ENSMUST00000008004 Rad54l2Q99NG0 1466 aa24.54■■□□□ 1.52
Ddx49-201ENSMUST00000008004 Map3k1P53349 1493 aa24.54■■□□□ 1.52
Ddx49-201ENSMUST00000008004 SynmQ70IV5 1561 aa24.5■■□□□ 1.51
Ddx49-201ENSMUST00000008004 Disp1Q3TDN0 1521 aa24.48■■□□□ 1.51
Ddx49-201ENSMUST00000008004 Setd1bQ8CFT2 1985 aa24.43■■□□□ 1.5
Ddx49-201ENSMUST00000008004 Ift140E9PY46 1464 aa24.43■■□□□ 1.5
Ddx49-201ENSMUST00000008004 Magi3Q9EQJ9 1476 aa24.41■■□□□ 1.5
Ddx49-201ENSMUST00000008004 Clip1Q922J3 1391 aa24.4■■□□□ 1.5
Ddx49-201ENSMUST00000008004 AqrQ8CFQ3 1481 aaKnown RBP24.4■■□□□ 1.5
Ddx49-201ENSMUST00000008004 Ehmt2Q9Z148 1263 aaKnown RBP24.38■■□□□ 1.49
Ddx49-201ENSMUST00000008004 Grin2aP35436 1464 aa24.36■■□□□ 1.49
Ddx49-201ENSMUST00000008004 Pla2r1Q62028 1487 aa24.36■■□□□ 1.49
Ddx49-201ENSMUST00000008004 Carmil1Q6EDY6 1374 aa24.35■■□□□ 1.49
Ddx49-201ENSMUST00000008004 Nup160Q9Z0W3 1402 aaKnown RBP24.31■■□□□ 1.48
Ddx49-201ENSMUST00000008004 Eif4g3Q80XI3 1579 aaKnown RBP24.31■■□□□ 1.48
Ddx49-201ENSMUST00000008004 Pbrm1Q8BSQ9 1634 aaKnown RBP24.28■■□□□ 1.48
Retrieved 100 of 22,080 RNA–protein pairs in 97.9 ms