RNA–Protein interactions for RNA: YGR109W-B

YGR109W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR109W-B, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-BYGR109W-B PPN1Q04119 674 aa1.82□□□□□ -2.12
YGR109W-BYGR109W-B YSH1Q06224 779 aaPredicted RBP1.82□□□□□ -2.12
YGR109W-BYGR109W-B ICT1Q12385 394 aa1.82□□□□□ -2.12
YGR109W-BYGR109W-B NKP1Q12493 238 aa1.82□□□□□ -2.12
YGR109W-BYGR109W-B SEC39Q12745 709 aa1.82□□□□□ -2.12
YGR109W-BYGR109W-B KAR1P11927 433 aa1.81□□□□□ -2.12
YGR109W-BYGR109W-B SEC15P22224 910 aa1.81□□□□□ -2.12
YGR109W-BYGR109W-B TSR4P25040 408 aa1.81□□□□□ -2.12
YGR109W-BYGR109W-B YCL002CP25565 263 aa1.81□□□□□ -2.12
YGR109W-BYGR109W-B RTA1P53047 317 aa1.81□□□□□ -2.12
YGR109W-BYGR109W-B MRPS35P53292 345 aa1.81□□□□□ -2.12
YGR109W-BYGR109W-B OGG1P53397 376 aaPredicted RBP1.81□□□□□ -2.12
YGR109W-BYGR109W-B ENT1Q12518 454 aa1.81□□□□□ -2.12
YGR109W-BYGR109W-B TRM3Q07527 1436 aa1.81□□□□□ -2.12
YGR109W-BYGR109W-B SEC3P33332 1336 aaKnown RBP1.81□□□□□ -2.12
YGR109W-BYGR109W-B NUP145P49687 1317 aa1.81□□□□□ -2.12
YGR109W-BYGR109W-B ERG20P08524 352 aaKnown RBP1.81□□□□□ -2.12
YGR109W-BYGR109W-B ADE2P21264 571 aaKnown RBP1.81□□□□□ -2.12
YGR109W-BYGR109W-B MEF1P25039 761 aa1.81□□□□□ -2.12
YGR109W-BYGR109W-B KIN82P25341 720 aa1.81□□□□□ -2.12
YGR109W-BYGR109W-B RPN2P32565 945 aaKnown RBP1.81□□□□□ -2.12
YGR109W-BYGR109W-B DOT6P40059 670 aaKnown RBP1.81□□□□□ -2.12
YGR109W-BYGR109W-B THI6P41835 540 aa1.81□□□□□ -2.12
YGR109W-BYGR109W-B TY4A-JP47023 414 aa1.81□□□□□ -2.12
YGR109W-BYGR109W-B YNR061CP53747 219 aa1.81□□□□□ -2.12
YGR109W-BYGR109W-B RPN7Q06103 429 aaKnown RBP1.81□□□□□ -2.12
YGR109W-BYGR109W-B TMT1P32643 299 aa1.81□□□□□ -2.12
YGR109W-BYGR109W-B FMO1P38866 432 aa1.81□□□□□ -2.12
YGR109W-BYGR109W-B OCA1P50946 238 aaPredicted RBP1.81□□□□□ -2.12
YGR109W-BYGR109W-B POL4P25615 582 aa1.81□□□□□ -2.12
YGR109W-BYGR109W-B FUB1P25659 250 aa1.81□□□□□ -2.12
YGR109W-BYGR109W-B MCD4P36051 919 aa1.81□□□□□ -2.12
YGR109W-BYGR109W-B APL3P38065 1025 aa1.81□□□□□ -2.12
YGR109W-BYGR109W-B BIT2P38346 545 aa1.81□□□□□ -2.12
YGR109W-BYGR109W-B IML2P47031 731 aa1.81□□□□□ -2.12
YGR109W-BYGR109W-B PAN2P53010 1115 aaPredicted RBP1.81□□□□□ -2.12
YGR109W-BYGR109W-B ADA2Q02336 434 aa1.81□□□□□ -2.12
YGR109W-BYGR109W-B LYS21Q12122 440 aaKnown RBP1.81□□□□□ -2.12
YGR109W-BYGR109W-B TAF2P23255 1407 aa1.81□□□□□ -2.12
YGR109W-BYGR109W-B YEF3P16521 1044 aaKnown RBP1.8□□□□□ -2.12
YGR109W-BYGR109W-B GCD7P32502 381 aaPredicted RBP1.8□□□□□ -2.12
YGR109W-BYGR109W-B YHR112CP38716 378 aa1.8□□□□□ -2.12
YGR109W-BYGR109W-B CCT7P42943 550 aaKnown RBP1.8□□□□□ -2.12
YGR109W-BYGR109W-B UBC9P50623 157 aaPredicted RBP1.8□□□□□ -2.12
YGR109W-BYGR109W-B CWC21Q03375 135 aaKnown RBP1.8□□□□□ -2.12
YGR109W-BYGR109W-B MRI1Q06489 411 aaKnown RBP1.8□□□□□ -2.12
YGR109W-BYGR109W-B RPN12P32496 274 aa1.8□□□□□ -2.12
YGR109W-BYGR109W-B CBF5P33322 483 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
YGR109W-BYGR109W-B YKR075CP36155 307 aa1.8□□□□□ -2.12
YGR109W-BYGR109W-B SET2P46995 733 aaKnown RBP1.8□□□□□ -2.12
YGR109W-BYGR109W-B YDR338CQ05497 695 aa1.8□□□□□ -2.12
YGR109W-BYGR109W-B RTP1Q12751 981 aa1.8□□□□□ -2.12
YGR109W-BYGR109W-B YPK9Q12697 1472 aa1.8□□□□□ -2.12
YGR109W-BYGR109W-B YMR084WA2P2R3 262 aa1.8□□□□□ -2.12
YGR109W-BYGR109W-B GAL4P04386 881 aa1.8□□□□□ -2.12
YGR109W-BYGR109W-B RNR1P21524 888 aaKnown RBP1.8□□□□□ -2.12
YGR109W-BYGR109W-B PHO11P35842 467 aa1.8□□□□□ -2.12
YGR109W-BYGR109W-B PHO12P38693 467 aa1.8□□□□□ -2.12
YGR109W-BYGR109W-B ENP2P48234 707 aaKnown RBP1.8□□□□□ -2.12
YGR109W-BYGR109W-B NGL2Q03264 515 aaKnown RBP1.8□□□□□ -2.12
YGR109W-BYGR109W-B HLR1Q04429 423 aa1.8□□□□□ -2.12
YGR109W-BYGR109W-B ASM4Q05166 528 aa1.8□□□□□ -2.12
YGR109W-BYGR109W-B ORM2Q06144 216 aa1.8□□□□□ -2.12
YGR109W-BYGR109W-B VAS1P07806 1104 aaKnown RBP1.79□□□□□ -2.12
YGR109W-BYGR109W-B SSD1P24276 1250 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
YGR109W-BYGR109W-B MCM3P24279 971 aaKnown RBP1.79□□□□□ -2.12
YGR109W-BYGR109W-B PTP1P25044 335 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B MSH2P25847 964 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B PEX6P33760 1030 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B TCD1P38756 429 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B RPS0BP46654 252 aaKnown RBP1.79□□□□□ -2.12
YGR109W-BYGR109W-B AAT1Q01802 451 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B YLR149CQ99296 730 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B BNR1P40450 1375 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B QCR6P00127 147 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B SAT4P25333 603 aaKnown RBP1.79□□□□□ -2.12
YGR109W-BYGR109W-B DBF4P32325 704 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B PET127P32606 800 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B YKL100CP34248 587 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B CTP1P38152 299 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B SFB3P38810 929 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B YJR039WP47107 1121 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B HLJ1P48353 224 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B MTL1P53214 551 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B SPO1P53541 631 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B CHD1P32657 1468 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B PGK1P00560 416 aaKnown RBP1.79□□□□□ -2.12
YGR109W-BYGR109W-B UGP1P32861 499 aaKnown RBP1.79□□□□□ -2.12
YGR109W-BYGR109W-B UBP7P40453 1071 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B NBP2Q12163 236 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B POM34Q12445 299 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B TMA7Q3E764 64 aaKnown RBP1.79□□□□□ -2.12
YGR109W-BYGR109W-B THR1P17423 357 aaKnown RBP1.79□□□□□ -2.12
YGR109W-BYGR109W-B VBA3P25594 458 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B CCL1P37366 393 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B RKM3P38222 552 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B APD1P38281 316 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B PIH1P38768 344 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B ERP2P39704 215 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B PMT3P47190 753 aa1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms