Protein–RNA interactions for Protein: P25040

TSR4, 20S rRNA accumulation protein 4, yeastyeast

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TSR4P25040 YML009W-BYML009W-B 477 nt20.81■□□□□ 0.92
TSR4P25040 NSR1YGR159C 1245 nt20.74■□□□□ 0.91
TSR4P25040 NOP1YDL014W 984 nt20.1■□□□□ 0.81
TSR4P25040 MDJ1YFL016C 1536 nt18.65■□□□□ 0.58
TSR4P25040 YKL036CYKL036C 393 nt18.43■□□□□ 0.54
TSR4P25040 SRX1YKL086W 384 nt17.57■□□□□ 0.4
TSR4P25040 Q0297Q0297 156 nt17.54■□□□□ 0.4
TSR4P25040 YJL027CYJL027C 417 nt17.21■□□□□ 0.35
TSR4P25040 YCR051WYCR051W 669 nt16.73■□□□□ 0.27
TSR4P25040 SCS3YGL126W 1143 nt16.71■□□□□ 0.27
TSR4P25040 DBP2YNL112W 1641 nt16.41■□□□□ 0.22
TSR4P25040 YOL085CYOL085C 342 nt15.99■□□□□ 0.15
TSR4P25040 TRN1tP(UGG)A 72 nt15.98■□□□□ 0.15
TSR4P25040 SUF9tP(UGG)F 72 nt15.98■□□□□ 0.15
TSR4P25040 SUF8tP(UGG)H 72 nt15.98■□□□□ 0.15
TSR4P25040 tP(UGG)LtP(UGG)L 72 nt15.98■□□□□ 0.15
TSR4P25040 SUF7tP(UGG)M 72 nt15.98■□□□□ 0.15
TSR4P25040 tP(UGG)N1tP(UGG)N1 72 nt15.98■□□□□ 0.15
TSR4P25040 tP(UGG)N2tP(UGG)N2 72 nt15.98■□□□□ 0.15
TSR4P25040 tP(UGG)O1tP(UGG)O1 72 nt15.98■□□□□ 0.15
TSR4P25040 SUF11tP(UGG)O2 72 nt15.98■□□□□ 0.15
TSR4P25040 CCC1YLR220W 969 nt15.92■□□□□ 0.14
TSR4P25040 YBR190WYBR190W 312 nt15.86■□□□□ 0.13
TSR4P25040 PKP1YIL042C 1185 nt15.85■□□□□ 0.13
TSR4P25040 RPP1BYDL130W 321 nt15.76■□□□□ 0.11
TSR4P25040 RTC3YHR087W 336 nt15.58■□□□□ 0.08
TSR4P25040 Q0182Q0182 405 nt15.54■□□□□ 0.08
TSR4P25040 RVS167YDR388W 1449 nt15.35■□□□□ 0.05
TSR4P25040 SCJ1YMR214W 1134 nt15.29■□□□□ 0.04
TSR4P25040 PET122YER153C 765 nt15.11■□□□□ 0.01
TSR4P25040 tP(UGG)O3tP(UGG)O3 72 nt15.1■□□□□ 0.01
TSR4P25040 ATS1YAL020C 1002 nt14.9□□□□□ -0.02
TSR4P25040 MOT3YMR070W 1473 nt14.89□□□□□ -0.03
TSR4P25040 SCR1SCR1 522 nt14.87□□□□□ -0.03
TSR4P25040 SHR5YOL110W 714 nt14.78□□□□□ -0.04
TSR4P25040 SSA3YBL075C 1950 nt14.78□□□□□ -0.04
TSR4P25040 RRN5YLR141W 1092 nt14.68□□□□□ -0.06
TSR4P25040 PUT4YOR348C 1884 nt14.55□□□□□ -0.08
TSR4P25040 YDJ1YNL064C 1230 nt14.55□□□□□ -0.08
TSR4P25040 DEP1YAL013W 1218 nt14.52□□□□□ -0.09
TSR4P25040 URN1YPR152C 1398 nt14.5□□□□□ -0.09
TSR4P25040 YER088W-BYER088W-B 147 nt14.38□□□□□ -0.11
TSR4P25040 GAR1YHR089C 618 nt14.35□□□□□ -0.11
TSR4P25040 RSB1YOR049C 1065 nt14.33□□□□□ -0.12
TSR4P25040 SAH1YER043C 1350 nt14.3□□□□□ -0.12
TSR4P25040 OPI9YLR338W 858 nt14.29□□□□□ -0.12
TSR4P25040 ARE1YCR048W 1833 nt14.26□□□□□ -0.13
TSR4P25040 RPN10YHR200W 807 nt14.19□□□□□ -0.14
TSR4P25040 YNL208WYNL208W 600 nt14.18□□□□□ -0.14
TSR4P25040 POA1YBR022W 534 nt14.14□□□□□ -0.15
TSR4P25040 YHR049C-AYHR049C-A 297 nt14.08□□□□□ -0.16
TSR4P25040 PUN1YLR414C 792 nt13.86□□□□□ -0.19
TSR4P25040 TIR1YER011W 765 nt13.83□□□□□ -0.2
TSR4P25040 BSC6YOL137W 1494 nt13.82□□□□□ -0.2
TSR4P25040 PST2YDR032C 597 nt13.82□□□□□ -0.2
TSR4P25040 YJR018WYJR018W 363 nt13.81□□□□□ -0.2
TSR4P25040 BUD23YCR047C 828 nt13.78□□□□□ -0.2
TSR4P25040 PTC2YER089C 1395 nt13.78□□□□□ -0.2
TSR4P25040 SSA1YAL005C 1929 nt13.73□□□□□ -0.21
TSR4P25040 YJR120WYJR120W 351 nt13.58□□□□□ -0.24
TSR4P25040 NAB2YGL122C 1578 nt13.57□□□□□ -0.24
TSR4P25040 SRB2YHR041C 633 nt13.51□□□□□ -0.25
TSR4P25040 RPP2BYDR382W 333 nt13.48□□□□□ -0.25
TSR4P25040 FPR4YLR449W 1179 nt13.43□□□□□ -0.26
TSR4P25040 DAL1YIR027C 1383 nt13.38□□□□□ -0.27
TSR4P25040 FIS1YIL065C 468 nt13.37□□□□□ -0.27
TSR4P25040 SHU1YHL006C 453 nt13.33□□□□□ -0.28
TSR4P25040 INM2YDR287W 879 nt13.31□□□□□ -0.28
TSR4P25040 PHO4YFR034C 939 nt13.25□□□□□ -0.29
TSR4P25040 WWM1YFL010C 636 nt13.24□□□□□ -0.29
TSR4P25040 YAL037C-BYAL037C-B 975 nt13.24□□□□□ -0.29
TSR4P25040 SPT5YML010W 3192 nt13.24□□□□□ -0.29
TSR4P25040 YKL097CYKL097C 411 nt13.2□□□□□ -0.3
TSR4P25040 YBL100CYBL100C 315 nt13.19□□□□□ -0.3
TSR4P25040 BDH2YAL061W 1254 nt13.17□□□□□ -0.3
TSR4P25040 YPS1YLR120C 1710 nt13.04□□□□□ -0.32
TSR4P25040 FUN26YAL022C 1554 nt13.03□□□□□ -0.32
TSR4P25040 YGR021WYGR021W 873 nt13.02□□□□□ -0.33
TSR4P25040 HOM6YJR139C 1080 nt13.01□□□□□ -0.33
TSR4P25040 MNP1YGL068W 585 nt12.98□□□□□ -0.33
TSR4P25040 TRM9YML014W 840 nt12.98□□□□□ -0.33
TSR4P25040 MEP2YNL142W 1500 nt12.97□□□□□ -0.33
TSR4P25040 LSM3YLR438C-A 270 nt12.95□□□□□ -0.34
TSR4P25040 YFL021C-AYFL021C-A 855 nt12.94□□□□□ -0.34
TSR4P25040 YHR165W-AYHR165W-A 312 nt12.94□□□□□ -0.34
TSR4P25040 YDR095CYDR095C 411 nt12.92□□□□□ -0.34
TSR4P25040 ALF1YNL148C 765 nt12.88□□□□□ -0.35
TSR4P25040 SSA4YER103W 1929 nt12.84□□□□□ -0.35
TSR4P25040 CCT6YDR188W 1641 nt12.82□□□□□ -0.36
TSR4P25040 RKM5YLR137W 1104 nt12.82□□□□□ -0.36
TSR4P25040 DCW1YKL046C 1350 nt12.81□□□□□ -0.36
TSR4P25040 YOR139CYOR139C 393 nt12.72□□□□□ -0.37
TSR4P25040 SUF2tP(AGG)C 72 nt12.71□□□□□ -0.37
TSR4P25040 SUF10tP(AGG)N 72 nt12.71□□□□□ -0.37
TSR4P25040 RPP2AYOL039W 321 nt12.69□□□□□ -0.38
TSR4P25040 PTP1YDL230W 1008 nt12.68□□□□□ -0.38
TSR4P25040 SIS1YNL007C 1059 nt12.66□□□□□ -0.38
TSR4P25040 CAC2YML102W 1407 nt12.63□□□□□ -0.39
TSR4P25040 NPL3YDR432W 1245 nt12.63□□□□□ -0.39
TSR4P25040 EMI2YDR516C 1503 nt12.62□□□□□ -0.39
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms