Protein–RNA interactions for Protein: P40453

UBP7, Ubiquitin carboxyl-terminal hydrolase 7, yeastyeast

Predictions only

Length 1,071 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP7P40453 YML009W-BYML009W-B 477 nt20.96■□□□□ 0.95
UBP7P40453 NSR1YGR159C 1245 nt20.74■□□□□ 0.91
UBP7P40453 NOP1YDL014W 984 nt20.52■□□□□ 0.88
UBP7P40453 YKL036CYKL036C 393 nt19.12■□□□□ 0.65
UBP7P40453 MDJ1YFL016C 1536 nt18.13■□□□□ 0.49
UBP7P40453 Q0297Q0297 156 nt18.06■□□□□ 0.48
UBP7P40453 SRX1YKL086W 384 nt17.94■□□□□ 0.46
UBP7P40453 YJL027CYJL027C 417 nt17.85■□□□□ 0.45
UBP7P40453 SCS3YGL126W 1143 nt17.48■□□□□ 0.39
UBP7P40453 YCR051WYCR051W 669 nt16.97■□□□□ 0.31
UBP7P40453 YOL085CYOL085C 342 nt16.55■□□□□ 0.24
UBP7P40453 PKP1YIL042C 1185 nt16.21■□□□□ 0.19
UBP7P40453 RPP1BYDL130W 321 nt16.18■□□□□ 0.18
UBP7P40453 DBP2YNL112W 1641 nt16.17■□□□□ 0.18
UBP7P40453 TRN1tP(UGG)A 72 nt16.1■□□□□ 0.17
UBP7P40453 SUF9tP(UGG)F 72 nt16.1■□□□□ 0.17
UBP7P40453 SUF8tP(UGG)H 72 nt16.1■□□□□ 0.17
UBP7P40453 tP(UGG)LtP(UGG)L 72 nt16.1■□□□□ 0.17
UBP7P40453 SUF7tP(UGG)M 72 nt16.1■□□□□ 0.17
UBP7P40453 tP(UGG)N1tP(UGG)N1 72 nt16.1■□□□□ 0.17
UBP7P40453 tP(UGG)N2tP(UGG)N2 72 nt16.1■□□□□ 0.17
UBP7P40453 tP(UGG)O1tP(UGG)O1 72 nt16.1■□□□□ 0.17
UBP7P40453 SUF11tP(UGG)O2 72 nt16.1■□□□□ 0.17
UBP7P40453 CCC1YLR220W 969 nt15.85■□□□□ 0.13
UBP7P40453 SCJ1YMR214W 1134 nt15.83■□□□□ 0.12
UBP7P40453 ATS1YAL020C 1002 nt15.71■□□□□ 0.11
UBP7P40453 YBR190WYBR190W 312 nt15.48■□□□□ 0.07
UBP7P40453 PET122YER153C 765 nt15.41■□□□□ 0.06
UBP7P40453 SCR1SCR1 522 nt15.31■□□□□ 0.04
UBP7P40453 tP(UGG)O3tP(UGG)O3 72 nt15.28■□□□□ 0.04
UBP7P40453 RVS167YDR388W 1449 nt15.25■□□□□ 0.03
UBP7P40453 RTC3YHR087W 336 nt15.06■□□□□ 0
UBP7P40453 RRN5YLR141W 1092 nt14.98□□□□□ -0.01
UBP7P40453 YDJ1YNL064C 1230 nt14.83□□□□□ -0.04
UBP7P40453 SHR5YOL110W 714 nt14.79□□□□□ -0.04
UBP7P40453 RSB1YOR049C 1065 nt14.71□□□□□ -0.05
UBP7P40453 YER088W-BYER088W-B 147 nt14.7□□□□□ -0.06
UBP7P40453 SSA3YBL075C 1950 nt14.61□□□□□ -0.07
UBP7P40453 PST2YDR032C 597 nt14.53□□□□□ -0.08
UBP7P40453 GAR1YHR089C 618 nt14.38□□□□□ -0.11
UBP7P40453 DEP1YAL013W 1218 nt14.21□□□□□ -0.13
UBP7P40453 URN1YPR152C 1398 nt14.21□□□□□ -0.14
UBP7P40453 PUT4YOR348C 1884 nt14.16□□□□□ -0.14
UBP7P40453 RPN10YHR200W 807 nt14.09□□□□□ -0.15
UBP7P40453 YNL208WYNL208W 600 nt14.09□□□□□ -0.15
UBP7P40453 YKL097CYKL097C 411 nt14.04□□□□□ -0.16
UBP7P40453 OPI9YLR338W 858 nt14□□□□□ -0.17
UBP7P40453 TIR1YER011W 765 nt13.92□□□□□ -0.18
UBP7P40453 SHU1YHL006C 453 nt13.86□□□□□ -0.19
UBP7P40453 SAH1YER043C 1350 nt13.81□□□□□ -0.2
UBP7P40453 ARE1YCR048W 1833 nt13.72□□□□□ -0.21
UBP7P40453 SSA1YAL005C 1929 nt13.7□□□□□ -0.22
UBP7P40453 POA1YBR022W 534 nt13.65□□□□□ -0.22
UBP7P40453 PUN1YLR414C 792 nt13.6□□□□□ -0.23
UBP7P40453 YJR018WYJR018W 363 nt13.58□□□□□ -0.24
UBP7P40453 YHR049C-AYHR049C-A 297 nt13.54□□□□□ -0.24
UBP7P40453 YAL037C-BYAL037C-B 975 nt13.53□□□□□ -0.24
UBP7P40453 SRB2YHR041C 633 nt13.49□□□□□ -0.25
UBP7P40453 BSC6YOL137W 1494 nt13.48□□□□□ -0.25
UBP7P40453 YOR139CYOR139C 393 nt13.45□□□□□ -0.26
UBP7P40453 YJR120WYJR120W 351 nt13.44□□□□□ -0.26
UBP7P40453 RPP2BYDR382W 333 nt13.37□□□□□ -0.27
UBP7P40453 YGR021WYGR021W 873 nt13.37□□□□□ -0.27
UBP7P40453 PTC2YER089C 1395 nt13.35□□□□□ -0.27
UBP7P40453 WWM1YFL010C 636 nt13.32□□□□□ -0.28
UBP7P40453 HOM6YJR139C 1080 nt13.32□□□□□ -0.28
UBP7P40453 SPT5YML010W 3192 nt13.3□□□□□ -0.28
UBP7P40453 NPL3YDR432W 1245 nt13.27□□□□□ -0.29
UBP7P40453 MNP1YGL068W 585 nt13.22□□□□□ -0.29
UBP7P40453 NAB2YGL122C 1578 nt13.18□□□□□ -0.3
UBP7P40453 BUD23YCR047C 828 nt13.17□□□□□ -0.3
UBP7P40453 YFL021C-AYFL021C-A 855 nt13.16□□□□□ -0.3
UBP7P40453 BDH2YAL061W 1254 nt13.16□□□□□ -0.3
UBP7P40453 YOL037CYOL037C 354 nt13.16□□□□□ -0.3
UBP7P40453 RKM5YLR137W 1104 nt13.11□□□□□ -0.31
UBP7P40453 INM2YDR287W 879 nt13.1□□□□□ -0.31
UBP7P40453 SSA4YER103W 1929 nt13.09□□□□□ -0.31
UBP7P40453 LSM3YLR438C-A 270 nt13.05□□□□□ -0.32
UBP7P40453 DAL1YIR027C 1383 nt13.05□□□□□ -0.32
UBP7P40453 FIS1YIL065C 468 nt13.02□□□□□ -0.33
UBP7P40453 Q0182Q0182 405 nt12.98□□□□□ -0.33
UBP7P40453 YBL100CYBL100C 315 nt12.98□□□□□ -0.33
UBP7P40453 FPR4YLR449W 1179 nt12.94□□□□□ -0.34
UBP7P40453 PHO4YFR034C 939 nt12.91□□□□□ -0.34
UBP7P40453 tM(CAU)CtM(CAU)C 72 nt12.91□□□□□ -0.34
UBP7P40453 IMT4tM(CAU)E 72 nt12.91□□□□□ -0.34
UBP7P40453 IMT3tM(CAU)J3 72 nt12.91□□□□□ -0.34
UBP7P40453 IMT1tM(CAU)O1 72 nt12.91□□□□□ -0.34
UBP7P40453 IMT2tM(CAU)P 72 nt12.91□□□□□ -0.34
UBP7P40453 TRM9YML014W 840 nt12.85□□□□□ -0.35
UBP7P40453 FUN26YAL022C 1554 nt12.84□□□□□ -0.35
UBP7P40453 YLR281CYLR281C 468 nt12.82□□□□□ -0.36
UBP7P40453 CCT6YDR188W 1641 nt12.74□□□□□ -0.37
UBP7P40453 WHI5YOR083W 888 nt12.73□□□□□ -0.37
UBP7P40453 PUS2YGL063W 1113 nt12.72□□□□□ -0.37
UBP7P40453 MEP2YNL142W 1500 nt12.71□□□□□ -0.38
UBP7P40453 BDF1YLR399C 2061 nt12.65□□□□□ -0.39
UBP7P40453 SUF2tP(AGG)C 72 nt12.61□□□□□ -0.39
UBP7P40453 SUF10tP(AGG)N 72 nt12.61□□□□□ -0.39
UBP7P40453 YPS1YLR120C 1710 nt12.59□□□□□ -0.39
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms