Protein–RNA interactions for Protein: P53747

YNR061C, Uncharacterized vacuolar membrane protein YNR061C, yeastyeast

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNR061CP53747 YML009W-BYML009W-B 477 nt20.8■□□□□ 0.92
YNR061CP53747 NOP1YDL014W 984 nt20.43■□□□□ 0.86
YNR061CP53747 NSR1YGR159C 1245 nt20.3■□□□□ 0.84
YNR061CP53747 YKL036CYKL036C 393 nt19.31■□□□□ 0.68
YNR061CP53747 YJL027CYJL027C 417 nt18.1■□□□□ 0.49
YNR061CP53747 Q0297Q0297 156 nt18.07■□□□□ 0.48
YNR061CP53747 SRX1YKL086W 384 nt17.88■□□□□ 0.45
YNR061CP53747 SCS3YGL126W 1143 nt17.8■□□□□ 0.44
YNR061CP53747 MDJ1YFL016C 1536 nt17.54■□□□□ 0.4
YNR061CP53747 YCR051WYCR051W 669 nt16.96■□□□□ 0.31
YNR061CP53747 YOL085CYOL085C 342 nt16.72■□□□□ 0.27
YNR061CP53747 SCJ1YMR214W 1134 nt16.41■□□□□ 0.22
YNR061CP53747 PKP1YIL042C 1185 nt16.39■□□□□ 0.21
YNR061CP53747 RPP1BYDL130W 321 nt16.2■□□□□ 0.18
YNR061CP53747 ATS1YAL020C 1002 nt16.07■□□□□ 0.16
YNR061CP53747 TRN1tP(UGG)A 72 nt15.87■□□□□ 0.13
YNR061CP53747 SUF9tP(UGG)F 72 nt15.87■□□□□ 0.13
YNR061CP53747 SUF8tP(UGG)H 72 nt15.87■□□□□ 0.13
YNR061CP53747 tP(UGG)LtP(UGG)L 72 nt15.87■□□□□ 0.13
YNR061CP53747 SUF7tP(UGG)M 72 nt15.87■□□□□ 0.13
YNR061CP53747 tP(UGG)N1tP(UGG)N1 72 nt15.87■□□□□ 0.13
YNR061CP53747 tP(UGG)N2tP(UGG)N2 72 nt15.87■□□□□ 0.13
YNR061CP53747 tP(UGG)O1tP(UGG)O1 72 nt15.87■□□□□ 0.13
YNR061CP53747 SUF11tP(UGG)O2 72 nt15.87■□□□□ 0.13
YNR061CP53747 DBP2YNL112W 1641 nt15.74■□□□□ 0.11
YNR061CP53747 CCC1YLR220W 969 nt15.69■□□□□ 0.1
YNR061CP53747 PET122YER153C 765 nt15.42■□□□□ 0.06
YNR061CP53747 SCR1SCR1 522 nt15.37■□□□□ 0.05
YNR061CP53747 tP(UGG)O3tP(UGG)O3 72 nt15.19■□□□□ 0.02
YNR061CP53747 RRN5YLR141W 1092 nt15.04■□□□□ -0
YNR061CP53747 RTC3YHR087W 336 nt14.88□□□□□ -0.03
YNR061CP53747 RVS167YDR388W 1449 nt14.88□□□□□ -0.03
YNR061CP53747 YBR190WYBR190W 312 nt14.85□□□□□ -0.03
YNR061CP53747 RSB1YOR049C 1065 nt14.84□□□□□ -0.03
YNR061CP53747 PST2YDR032C 597 nt14.82□□□□□ -0.04
YNR061CP53747 YER088W-BYER088W-B 147 nt14.74□□□□□ -0.05
YNR061CP53747 YDJ1YNL064C 1230 nt14.7□□□□□ -0.06
YNR061CP53747 SHR5YOL110W 714 nt14.5□□□□□ -0.09
YNR061CP53747 YKL097CYKL097C 411 nt14.46□□□□□ -0.09
YNR061CP53747 GAR1YHR089C 618 nt14.26□□□□□ -0.13
YNR061CP53747 SHU1YHL006C 453 nt14.09□□□□□ -0.15
YNR061CP53747 DEP1YAL013W 1218 nt13.9□□□□□ -0.18
YNR061CP53747 YOR139CYOR139C 393 nt13.81□□□□□ -0.2
YNR061CP53747 URN1YPR152C 1398 nt13.78□□□□□ -0.2
YNR061CP53747 TIR1YER011W 765 nt13.77□□□□□ -0.21
YNR061CP53747 YNL208WYNL208W 600 nt13.77□□□□□ -0.21
YNR061CP53747 YAL037C-BYAL037C-B 975 nt13.7□□□□□ -0.22
YNR061CP53747 RPN10YHR200W 807 nt13.69□□□□□ -0.22
YNR061CP53747 NPL3YDR432W 1245 nt13.56□□□□□ -0.24
YNR061CP53747 SSA1YAL005C 1929 nt13.51□□□□□ -0.25
YNR061CP53747 OPI9YLR338W 858 nt13.5□□□□□ -0.25
YNR061CP53747 SRB2YHR041C 633 nt13.38□□□□□ -0.27
YNR061CP53747 YGR021WYGR021W 873 nt13.31□□□□□ -0.28
YNR061CP53747 HOM6YJR139C 1080 nt13.31□□□□□ -0.28
YNR061CP53747 MNP1YGL068W 585 nt13.29□□□□□ -0.28
YNR061CP53747 YOL037CYOL037C 354 nt13.28□□□□□ -0.28
YNR061CP53747 SAH1YER043C 1350 nt13.28□□□□□ -0.28
YNR061CP53747 tM(CAU)CtM(CAU)C 72 nt13.25□□□□□ -0.29
YNR061CP53747 IMT4tM(CAU)E 72 nt13.25□□□□□ -0.29
YNR061CP53747 IMT3tM(CAU)J3 72 nt13.25□□□□□ -0.29
YNR061CP53747 IMT1tM(CAU)O1 72 nt13.25□□□□□ -0.29
YNR061CP53747 IMT2tM(CAU)P 72 nt13.25□□□□□ -0.29
YNR061CP53747 WWM1YFL010C 636 nt13.24□□□□□ -0.29
YNR061CP53747 YJR018WYJR018W 363 nt13.19□□□□□ -0.3
YNR061CP53747 PUT4YOR348C 1884 nt13.11□□□□□ -0.31
YNR061CP53747 YJR120WYJR120W 351 nt13.11□□□□□ -0.31
YNR061CP53747 PUN1YLR414C 792 nt13.11□□□□□ -0.31
YNR061CP53747 RKM5YLR137W 1104 nt13.1□□□□□ -0.31
YNR061CP53747 RPP2BYDR382W 333 nt13.04□□□□□ -0.32
YNR061CP53747 YFL021C-AYFL021C-A 855 nt13.04□□□□□ -0.32
YNR061CP53747 ARE1YCR048W 1833 nt13.02□□□□□ -0.33
YNR061CP53747 PUS2YGL063W 1113 nt12.96□□□□□ -0.33
YNR061CP53747 SSA3YBL075C 1950 nt12.95□□□□□ -0.34
YNR061CP53747 YLR281CYLR281C 468 nt12.94□□□□□ -0.34
YNR061CP53747 MOT3YMR070W 1473 nt12.91□□□□□ -0.34
YNR061CP53747 Q0182Q0182 405 nt12.88□□□□□ -0.35
YNR061CP53747 BDH2YAL061W 1254 nt12.88□□□□□ -0.35
YNR061CP53747 PTC2YER089C 1395 nt12.85□□□□□ -0.35
YNR061CP53747 YHR049C-AYHR049C-A 297 nt12.83□□□□□ -0.36
YNR061CP53747 LSM3YLR438C-A 270 nt12.82□□□□□ -0.36
YNR061CP53747 WHI5YOR083W 888 nt12.82□□□□□ -0.36
YNR061CP53747 POA1YBR022W 534 nt12.75□□□□□ -0.37
YNR061CP53747 BSC6YOL137W 1494 nt12.73□□□□□ -0.37
YNR061CP53747 INM2YDR287W 879 nt12.67□□□□□ -0.38
YNR061CP53747 YPR011CYPR011C 981 nt12.63□□□□□ -0.39
YNR061CP53747 NAB2YGL122C 1578 nt12.63□□□□□ -0.39
YNR061CP53747 FMP45YDL222C 930 nt12.62□□□□□ -0.39
YNR061CP53747 YBL100CYBL100C 315 nt12.61□□□□□ -0.39
YNR061CP53747 MRPL8YJL063C 717 nt12.6□□□□□ -0.39
YNR061CP53747 DSK2YMR276W 1122 nt12.59□□□□□ -0.39
YNR061CP53747 BUD23YCR047C 828 nt12.57□□□□□ -0.4
YNR061CP53747 TRM9YML014W 840 nt12.55□□□□□ -0.4
YNR061CP53747 DAL1YIR027C 1383 nt12.55□□□□□ -0.4
YNR061CP53747 YCH1YGR203W 447 nt12.54□□□□□ -0.4
YNR061CP53747 IMP2'YIL154C 1041 nt12.54□□□□□ -0.4
YNR061CP53747 YLR236CYLR236C 324 nt12.54□□□□□ -0.4
YNR061CP53747 FPR4YLR449W 1179 nt12.51□□□□□ -0.41
YNR061CP53747 FIS1YIL065C 468 nt12.49□□□□□ -0.41
YNR061CP53747 FUN26YAL022C 1554 nt12.48□□□□□ -0.41
YNR061CP53747 YLR154C-GYLR154C-G 150 nt12.47□□□□□ -0.41
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms