Protein–RNA interactions for Protein: P47107

YJR039W, Uncharacterized protein YJR039W, yeastyeast

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YJR039WP47107 NSR1YGR159C 1245 nt20.92■□□□□ 0.94
YJR039WP47107 YML009W-BYML009W-B 477 nt20.72■□□□□ 0.91
YJR039WP47107 NOP1YDL014W 984 nt19.92■□□□□ 0.78
YJR039WP47107 MDJ1YFL016C 1536 nt19.09■□□□□ 0.65
YJR039WP47107 YKL036CYKL036C 393 nt17.94■□□□□ 0.46
YJR039WP47107 YJL027CYJL027C 417 nt17.55■□□□□ 0.4
YJR039WP47107 SRX1YKL086W 384 nt17.37■□□□□ 0.37
YJR039WP47107 Q0297Q0297 156 nt17.24■□□□□ 0.35
YJR039WP47107 DBP2YNL112W 1641 nt16.63■□□□□ 0.25
YJR039WP47107 YCR051WYCR051W 669 nt16.51■□□□□ 0.23
YJR039WP47107 YBR190WYBR190W 312 nt16.34■□□□□ 0.21
YJR039WP47107 SCS3YGL126W 1143 nt16.1■□□□□ 0.17
YJR039WP47107 RTC3YHR087W 336 nt16.03■□□□□ 0.16
YJR039WP47107 TRN1tP(UGG)A 72 nt15.99■□□□□ 0.15
YJR039WP47107 SUF9tP(UGG)F 72 nt15.99■□□□□ 0.15
YJR039WP47107 SUF8tP(UGG)H 72 nt15.99■□□□□ 0.15
YJR039WP47107 tP(UGG)LtP(UGG)L 72 nt15.99■□□□□ 0.15
YJR039WP47107 SUF7tP(UGG)M 72 nt15.99■□□□□ 0.15
YJR039WP47107 tP(UGG)N1tP(UGG)N1 72 nt15.99■□□□□ 0.15
YJR039WP47107 tP(UGG)N2tP(UGG)N2 72 nt15.99■□□□□ 0.15
YJR039WP47107 tP(UGG)O1tP(UGG)O1 72 nt15.99■□□□□ 0.15
YJR039WP47107 SUF11tP(UGG)O2 72 nt15.99■□□□□ 0.15
YJR039WP47107 CCC1YLR220W 969 nt15.89■□□□□ 0.13
YJR039WP47107 RVS167YDR388W 1449 nt15.59■□□□□ 0.09
YJR039WP47107 YOL085CYOL085C 342 nt15.54■□□□□ 0.08
YJR039WP47107 RPP1BYDL130W 321 nt15.5■□□□□ 0.07
YJR039WP47107 PKP1YIL042C 1185 nt15.41■□□□□ 0.06
YJR039WP47107 SCJ1YMR214W 1134 nt15.41■□□□□ 0.06
YJR039WP47107 SSA3YBL075C 1950 nt15.29■□□□□ 0.04
YJR039WP47107 PUT4YOR348C 1884 nt15.2■□□□□ 0.02
YJR039WP47107 tP(UGG)O3tP(UGG)O3 72 nt14.98□□□□□ -0.01
YJR039WP47107 SHR5YOL110W 714 nt14.91□□□□□ -0.02
YJR039WP47107 PET122YER153C 765 nt14.88□□□□□ -0.03
YJR039WP47107 URN1YPR152C 1398 nt14.81□□□□□ -0.04
YJR039WP47107 ARE1YCR048W 1833 nt14.79□□□□□ -0.04
YJR039WP47107 POA1YBR022W 534 nt14.71□□□□□ -0.05
YJR039WP47107 SAH1YER043C 1350 nt14.71□□□□□ -0.06
YJR039WP47107 DEP1YAL013W 1218 nt14.7□□□□□ -0.06
YJR039WP47107 OPI9YLR338W 858 nt14.65□□□□□ -0.06
YJR039WP47107 YHR049C-AYHR049C-A 297 nt14.64□□□□□ -0.07
YJR039WP47107 SCR1SCR1 522 nt14.6□□□□□ -0.07
YJR039WP47107 RPN10YHR200W 807 nt14.48□□□□□ -0.09
YJR039WP47107 BSC6YOL137W 1494 nt14.48□□□□□ -0.09
YJR039WP47107 YDJ1YNL064C 1230 nt14.47□□□□□ -0.09
YJR039WP47107 RRN5YLR141W 1092 nt14.38□□□□□ -0.11
YJR039WP47107 YNL208WYNL208W 600 nt14.37□□□□□ -0.11
YJR039WP47107 BUD23YCR047C 828 nt14.29□□□□□ -0.12
YJR039WP47107 GAR1YHR089C 618 nt14.27□□□□□ -0.13
YJR039WP47107 ATS1YAL020C 1002 nt14.24□□□□□ -0.13
YJR039WP47107 PUN1YLR414C 792 nt14.23□□□□□ -0.13
YJR039WP47107 PTC2YER089C 1395 nt14.15□□□□□ -0.14
YJR039WP47107 YER088W-BYER088W-B 147 nt14.1□□□□□ -0.15
YJR039WP47107 YJR018WYJR018W 363 nt14.07□□□□□ -0.16
YJR039WP47107 SPT5YML010W 3192 nt14.06□□□□□ -0.16
YJR039WP47107 NAB2YGL122C 1578 nt14.02□□□□□ -0.16
YJR039WP47107 RSB1YOR049C 1065 nt13.99□□□□□ -0.17
YJR039WP47107 SSA4YER103W 1929 nt13.84□□□□□ -0.19
YJR039WP47107 TIR1YER011W 765 nt13.81□□□□□ -0.2
YJR039WP47107 FIS1YIL065C 468 nt13.79□□□□□ -0.2
YJR039WP47107 FPR4YLR449W 1179 nt13.77□□□□□ -0.21
YJR039WP47107 DAL1YIR027C 1383 nt13.75□□□□□ -0.21
YJR039WP47107 SSA1YAL005C 1929 nt13.73□□□□□ -0.21
YJR039WP47107 YJR120WYJR120W 351 nt13.73□□□□□ -0.21
YJR039WP47107 RPP2BYDR382W 333 nt13.69□□□□□ -0.22
YJR039WP47107 PHO4YFR034C 939 nt13.64□□□□□ -0.23
YJR039WP47107 MEP2YNL142W 1500 nt13.62□□□□□ -0.23
YJR039WP47107 INM2YDR287W 879 nt13.61□□□□□ -0.23
YJR039WP47107 YPS1YLR120C 1710 nt13.51□□□□□ -0.25
YJR039WP47107 YBL100CYBL100C 315 nt13.45□□□□□ -0.26
YJR039WP47107 YHR165W-AYHR165W-A 312 nt13.44□□□□□ -0.26
YJR039WP47107 DCW1YKL046C 1350 nt13.42□□□□□ -0.26
YJR039WP47107 SRB2YHR041C 633 nt13.41□□□□□ -0.26
YJR039WP47107 YDR095CYDR095C 411 nt13.34□□□□□ -0.27
YJR039WP47107 BDH2YAL061W 1254 nt13.31□□□□□ -0.28
YJR039WP47107 BDF1YLR399C 2061 nt13.31□□□□□ -0.28
YJR039WP47107 FUN26YAL022C 1554 nt13.26□□□□□ -0.29
YJR039WP47107 PST2YDR032C 597 nt13.24□□□□□ -0.29
YJR039WP47107 EMI2YDR516C 1503 nt13.22□□□□□ -0.29
YJR039WP47107 ALF1YNL148C 765 nt13.19□□□□□ -0.3
YJR039WP47107 YMR090WYMR090W 684 nt13.18□□□□□ -0.3
YJR039WP47107 TRM9YML014W 840 nt13.14□□□□□ -0.31
YJR039WP47107 TAT1YBR069C 1860 nt13.13□□□□□ -0.31
YJR039WP47107 WWM1YFL010C 636 nt13.12□□□□□ -0.31
YJR039WP47107 YBR220CYBR220C 1683 nt13.11□□□□□ -0.31
YJR039WP47107 RPP2AYOL039W 321 nt13.1□□□□□ -0.31
YJR039WP47107 YDL221WYDL221W 552 nt13.09□□□□□ -0.31
YJR039WP47107 CAC2YML102W 1407 nt13.07□□□□□ -0.32
YJR039WP47107 PTP1YDL230W 1008 nt13.07□□□□□ -0.32
YJR039WP47107 LSM3YLR438C-A 270 nt13.03□□□□□ -0.32
YJR039WP47107 CCT6YDR188W 1641 nt13.02□□□□□ -0.32
YJR039WP47107 SDH1YKL148C 1923 nt13□□□□□ -0.33
YJR039WP47107 Q0182Q0182 405 nt13□□□□□ -0.33
YJR039WP47107 SUF2tP(AGG)C 72 nt12.96□□□□□ -0.33
YJR039WP47107 SUF10tP(AGG)N 72 nt12.96□□□□□ -0.33
YJR039WP47107 SIS1YNL007C 1059 nt12.94□□□□□ -0.34
YJR039WP47107 YFL021C-AYFL021C-A 855 nt12.9□□□□□ -0.34
YJR039WP47107 YGR021WYGR021W 873 nt12.9□□□□□ -0.34
YJR039WP47107 IRC15YPL017C 1500 nt12.88□□□□□ -0.35
YJR039WP47107 SCC4YER147C 1875 nt12.87□□□□□ -0.35
YJR039WP47107 SHU1YHL006C 453 nt12.85□□□□□ -0.35
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms