RNA–Protein interactions for RNA: YGR109W-B

YGR109W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR109W-B, Length 4,644 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-BYGR109W-B MTC1P47018 478 aaKnown RBP5.55□□□□□ -1.52
YGR109W-BYGR109W-B DRS1P32892 752 aaKnown RBP5.22□□□□□ -1.57
YGR109W-BYGR109W-B FAP1P53971 965 aa4.86□□□□□ -1.63
YGR109W-BYGR109W-B ISW2Q08773 1120 aa4.66□□□□□ -1.66
YGR109W-BYGR109W-B PRI1P10363 409 aa4.63□□□□□ -1.67
YGR109W-BYGR109W-B AAD16Q02895 342 aa4.62□□□□□ -1.67
YGR109W-BYGR109W-B DIP2Q12220 943 aaPredicted RBP4.56□□□□□ -1.68
YGR109W-BYGR109W-B PRY3P47033 881 aa4.54□□□□□ -1.68
YGR109W-BYGR109W-B RPG1P38249 964 aaKnown RBP4.5□□□□□ -1.69
YGR109W-BYGR109W-B RSE1Q04693 1361 aaKnown RBP4.46□□□□□ -1.7
YGR109W-BYGR109W-B AVT3P36062 692 aa4.41□□□□□ -1.7
YGR109W-BYGR109W-B HAA1Q12753 694 aaKnown RBP4.41□□□□□ -1.7
YGR109W-BYGR109W-B BFR2Q06631 534 aaKnown RBP4.41□□□□□ -1.7
YGR109W-BYGR109W-B TSR3Q12094 313 aaKnown RBP4.3□□□□□ -1.72
YGR109W-BYGR109W-B MRPL32P25348 183 aa4.27□□□□□ -1.73
YGR109W-BYGR109W-B REB1P21538 810 aa4.26□□□□□ -1.73
YGR109W-BYGR109W-B RPL17AP05740 184 aaKnown RBP4.25□□□□□ -1.73
YGR109W-BYGR109W-B RPL17BP46990 184 aaKnown RBP4.25□□□□□ -1.73
YGR109W-BYGR109W-B YCK3P39962 524 aa4.19□□□□□ -1.74
YGR109W-BYGR109W-B YGL015CP33199 130 aa4.1□□□□□ -1.75
YGR109W-BYGR109W-B TFA1P36100 482 aa4.06□□□□□ -1.76
YGR109W-BYGR109W-B SPT21P35209 758 aa4.06□□□□□ -1.76
YGR109W-BYGR109W-B UBP10P53874 792 aaPredicted RBP3.99□□□□□ -1.77
YGR109W-BYGR109W-B RIM101P33400 625 aa3.98□□□□□ -1.77
YGR109W-BYGR109W-B YKR023WP36119 530 aaKnown RBP3.96□□□□□ -1.77
YGR109W-BYGR109W-B CDC27P38042 758 aa3.93□□□□□ -1.78
YGR109W-BYGR109W-B TFC8Q12308 588 aa3.92□□□□□ -1.78
YGR109W-BYGR109W-B TIF4632P39936 914 aaKnown RBP3.85□□□□□ -1.79
YGR109W-BYGR109W-B HOP09932 586 aa3.84□□□□□ -1.79
YGR109W-BYGR109W-B MAP2P38174 421 aaKnown RBP3.83□□□□□ -1.8
YGR109W-BYGR109W-B TGL3P40308 642 aa3.82□□□□□ -1.8
YGR109W-BYGR109W-B YIL055CP40523 627 aaKnown RBP3.82□□□□□ -1.8
YGR109W-BYGR109W-B SLX5P32828 619 aaKnown RBP3.81□□□□□ -1.8
YGR109W-BYGR109W-B SCY1P53009 804 aa3.78□□□□□ -1.8
YGR109W-BYGR109W-B PTP3P40048 928 aa3.76□□□□□ -1.81
YGR109W-BYGR109W-B BBC1P47068 1157 aa3.76□□□□□ -1.81
YGR109W-BYGR109W-B OXP1P28273 1286 aa3.76□□□□□ -1.81
YGR109W-BYGR109W-B BCH2P36122 765 aa3.75□□□□□ -1.81
YGR109W-BYGR109W-B DCD1P06773 312 aa3.75□□□□□ -1.81
YGR109W-BYGR109W-B RSM7P47150 247 aa3.74□□□□□ -1.81
YGR109W-BYGR109W-B ARP8Q12386 881 aaKnown RBP RIP-Chip data3.73□□□□□ -1.81not detected
YGR109W-BYGR109W-B UBP9P39967 754 aa3.72□□□□□ -1.81
YGR109W-BYGR109W-B NSR1P27476 414 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
YGR109W-BYGR109W-B EPS1P40557 701 aa3.71□□□□□ -1.81
YGR109W-BYGR109W-B BUD31P25337 157 aaPredicted RBP3.69□□□□□ -1.82
YGR109W-BYGR109W-B AI2P03876 854 aa3.67□□□□□ -1.82
YGR109W-BYGR109W-B BDF1P35817 686 aa3.67□□□□□ -1.82
YGR109W-BYGR109W-B SSP1P38871 571 aa3.67□□□□□ -1.82
YGR109W-BYGR109W-B YAH1Q12184 172 aaKnown RBP3.65□□□□□ -1.83
YGR109W-BYGR109W-B YOR238WQ08634 303 aa3.64□□□□□ -1.83
YGR109W-BYGR109W-B MST1P07236 462 aa3.63□□□□□ -1.83
YGR109W-BYGR109W-B YAP5P40574 245 aa3.63□□□□□ -1.83
YGR109W-BYGR109W-B YLR271WQ06152 274 aa3.61□□□□□ -1.83
YGR109W-BYGR109W-B PSD2P53037 1138 aaKnown RBP3.6□□□□□ -1.83
YGR109W-BYGR109W-B MGA2P40578 1113 aa3.59□□□□□ -1.84
YGR109W-BYGR109W-B GTT3P39996 337 aa3.56□□□□□ -1.84
YGR109W-BYGR109W-B SIS1P25294 352 aaKnown RBP3.54□□□□□ -1.84
YGR109W-BYGR109W-B RTG3P38165 486 aa3.53□□□□□ -1.84
YGR109W-BYGR109W-B MSB4Q12317 492 aa3.53□□□□□ -1.84
YGR109W-BYGR109W-B EAP1P36041 632 aaKnown RBP3.52□□□□□ -1.85
YGR109W-BYGR109W-B YMR1P47147 688 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
YGR109W-BYGR109W-B ABP1P15891 592 aaKnown RBP3.51□□□□□ -1.85
YGR109W-BYGR109W-B MRM1P25270 412 aa3.51□□□□□ -1.85
YGR109W-BYGR109W-B VNX1P42839 908 aa3.49□□□□□ -1.85
YGR109W-BYGR109W-B TIF11P38912 153 aaKnown RBP3.49□□□□□ -1.85
YGR109W-BYGR109W-B SPP1Q03012 353 aa3.48□□□□□ -1.85
YGR109W-BYGR109W-B SAM3Q08986 587 aa3.45□□□□□ -1.86
YGR109W-BYGR109W-B YBL029C-AQ3E756 94 aa3.45□□□□□ -1.86
YGR109W-BYGR109W-B NOP53Q12080 455 aaKnown RBP3.45□□□□□ -1.86
YGR109W-BYGR109W-B VPS29P38759 282 aa3.45□□□□□ -1.86
YGR109W-BYGR109W-B CST9Q06032 482 aa3.45□□□□□ -1.86
YGR109W-BYGR109W-B WSC3Q12215 556 aa3.43□□□□□ -1.86
YGR109W-BYGR109W-B DBP1P24784 617 aaKnown RBP3.43□□□□□ -1.86
YGR109W-BYGR109W-B ULI1P43604 169 aa3.42□□□□□ -1.86
YGR109W-BYGR109W-B VMA1P17255 1071 aaKnown RBP3.42□□□□□ -1.86
YGR109W-BYGR109W-B MAK11P20484 414 aaKnown RBP3.41□□□□□ -1.86
YGR109W-BYGR109W-B JIP4Q03361 876 aa3.41□□□□□ -1.86
YGR109W-BYGR109W-B YOL036WQ08206 761 aa3.41□□□□□ -1.86
YGR109W-BYGR109W-B FKH1P40466 484 aa3.41□□□□□ -1.86
YGR109W-BYGR109W-B YJL171CP46992 396 aa3.41□□□□□ -1.86
YGR109W-BYGR109W-B SEC61P32915 480 aa3.4□□□□□ -1.86
YGR109W-BYGR109W-B TFG1P41895 735 aaPredicted RBP3.4□□□□□ -1.87
YGR109W-BYGR109W-B YNL035CP53962 389 aaKnown RBP3.4□□□□□ -1.87
YGR109W-BYGR109W-B IOC2Q12072 812 aa3.39□□□□□ -1.87
YGR109W-BYGR109W-B HTA1P04911 132 aaKnown RBP3.38□□□□□ -1.87
YGR109W-BYGR109W-B HTA2P04912 132 aa3.38□□□□□ -1.87
YGR109W-BYGR109W-B GYP5Q12344 894 aa3.38□□□□□ -1.87
YGR109W-BYGR109W-B STS1P38637 319 aa3.38□□□□□ -1.87
YGR109W-BYGR109W-B LDB19Q12502 818 aa3.37□□□□□ -1.87
YGR109W-BYGR109W-B BMT6Q12291 365 aa3.37□□□□□ -1.87
YGR109W-BYGR109W-B AIR2Q12476 344 aaKnown RBP3.37□□□□□ -1.87
YGR109W-BYGR109W-B PIB1Q06651 286 aa3.36□□□□□ -1.87
YGR109W-BYGR109W-B GRE2Q12068 342 aaKnown RBP3.36□□□□□ -1.87
YGR109W-BYGR109W-B TRP5P00931 707 aaKnown RBP3.36□□□□□ -1.87
YGR109W-BYGR109W-B RTG1P32607 177 aa3.36□□□□□ -1.87
YGR109W-BYGR109W-B YFR006WP43590 535 aa3.36□□□□□ -1.87
YGR109W-BYGR109W-B SET4P42948 560 aa3.35□□□□□ -1.87
YGR109W-BYGR109W-B NCR1Q12200 1170 aa3.35□□□□□ -1.87
YGR109W-BYGR109W-B GUT1P32190 709 aa3.35□□□□□ -1.87
YGR109W-BYGR109W-B IFH1P39520 1085 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms