Protein–RNA interactions for Protein: P47023

TY4A-J, Transposon Ty4-J Gag polyprotein, yeastyeast

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4A-JP47023 YML009W-BYML009W-B 477 nt19.96■□□□□ 0.79
TY4A-JP47023 NSR1YGR159C 1245 nt19.76■□□□□ 0.75
TY4A-JP47023 NOP1YDL014W 984 nt19.44■□□□□ 0.7
TY4A-JP47023 YKL036CYKL036C 393 nt18.12■□□□□ 0.49
TY4A-JP47023 MDJ1YFL016C 1536 nt17.4■□□□□ 0.38
TY4A-JP47023 Q0297Q0297 156 nt17.17■□□□□ 0.34
TY4A-JP47023 SRX1YKL086W 384 nt17.06■□□□□ 0.32
TY4A-JP47023 YJL027CYJL027C 417 nt16.92■□□□□ 0.3
TY4A-JP47023 SCS3YGL126W 1143 nt16.61■□□□□ 0.25
TY4A-JP47023 YCR051WYCR051W 669 nt16.11■□□□□ 0.17
TY4A-JP47023 YOL085CYOL085C 342 nt15.73■□□□□ 0.11
TY4A-JP47023 DBP2YNL112W 1641 nt15.55■□□□□ 0.08
TY4A-JP47023 PKP1YIL042C 1185 nt15.43■□□□□ 0.06
TY4A-JP47023 RPP1BYDL130W 321 nt15.37■□□□□ 0.05
TY4A-JP47023 TRN1tP(UGG)A 72 nt15.37■□□□□ 0.05
TY4A-JP47023 SUF9tP(UGG)F 72 nt15.37■□□□□ 0.05
TY4A-JP47023 SUF8tP(UGG)H 72 nt15.37■□□□□ 0.05
TY4A-JP47023 tP(UGG)LtP(UGG)L 72 nt15.37■□□□□ 0.05
TY4A-JP47023 SUF7tP(UGG)M 72 nt15.37■□□□□ 0.05
TY4A-JP47023 tP(UGG)N1tP(UGG)N1 72 nt15.37■□□□□ 0.05
TY4A-JP47023 tP(UGG)N2tP(UGG)N2 72 nt15.37■□□□□ 0.05
TY4A-JP47023 tP(UGG)O1tP(UGG)O1 72 nt15.37■□□□□ 0.05
TY4A-JP47023 SUF11tP(UGG)O2 72 nt15.37■□□□□ 0.05
TY4A-JP47023 CCC1YLR220W 969 nt15.1■□□□□ 0.01
TY4A-JP47023 SCJ1YMR214W 1134 nt14.91□□□□□ -0.02
TY4A-JP47023 ATS1YAL020C 1002 nt14.9□□□□□ -0.02
TY4A-JP47023 Q0182Q0182 405 nt14.84□□□□□ -0.03
TY4A-JP47023 YBR190WYBR190W 312 nt14.8□□□□□ -0.04
TY4A-JP47023 SSA3YBL075C 1950 nt14.77□□□□□ -0.04
TY4A-JP47023 PET122YER153C 765 nt14.68□□□□□ -0.06
TY4A-JP47023 tP(UGG)O3tP(UGG)O3 72 nt14.56□□□□□ -0.08
TY4A-JP47023 RVS167YDR388W 1449 nt14.49□□□□□ -0.09
TY4A-JP47023 SCR1SCR1 522 nt14.48□□□□□ -0.09
TY4A-JP47023 RTC3YHR087W 336 nt14.38□□□□□ -0.11
TY4A-JP47023 RRN5YLR141W 1092 nt14.26□□□□□ -0.13
TY4A-JP47023 YDJ1YNL064C 1230 nt14.1□□□□□ -0.15
TY4A-JP47023 SHR5YOL110W 714 nt14.09□□□□□ -0.15
TY4A-JP47023 YER088W-BYER088W-B 147 nt14□□□□□ -0.17
TY4A-JP47023 RSB1YOR049C 1065 nt13.95□□□□□ -0.18
TY4A-JP47023 SSA1YAL005C 1929 nt13.94□□□□□ -0.18
TY4A-JP47023 MOT3YMR070W 1473 nt13.85□□□□□ -0.19
TY4A-JP47023 PST2YDR032C 597 nt13.81□□□□□ -0.2
TY4A-JP47023 PUT4YOR348C 1884 nt13.74□□□□□ -0.21
TY4A-JP47023 GAR1YHR089C 618 nt13.71□□□□□ -0.21
TY4A-JP47023 DEP1YAL013W 1218 nt13.6□□□□□ -0.23
TY4A-JP47023 URN1YPR152C 1398 nt13.58□□□□□ -0.23
TY4A-JP47023 YNL208WYNL208W 600 nt13.42□□□□□ -0.26
TY4A-JP47023 OPI9YLR338W 858 nt13.39□□□□□ -0.27
TY4A-JP47023 RPN10YHR200W 807 nt13.36□□□□□ -0.27
TY4A-JP47023 FPS1YLL043W 2010 nt13.29□□□□□ -0.28
TY4A-JP47023 TIR1YER011W 765 nt13.26□□□□□ -0.29
TY4A-JP47023 YKL097CYKL097C 411 nt13.26□□□□□ -0.29
TY4A-JP47023 SAH1YER043C 1350 nt13.25□□□□□ -0.29
TY4A-JP47023 ARE1YCR048W 1833 nt13.24□□□□□ -0.29
TY4A-JP47023 POA1YBR022W 534 nt13.21□□□□□ -0.29
TY4A-JP47023 SHU1YHL006C 453 nt13.2□□□□□ -0.3
TY4A-JP47023 SPT5YML010W 3192 nt13.12□□□□□ -0.31
TY4A-JP47023 BSC6YOL137W 1494 nt13.1□□□□□ -0.31
TY4A-JP47023 YHR049C-AYHR049C-A 297 nt13.06□□□□□ -0.32
TY4A-JP47023 SSA4YER103W 1929 nt13.02□□□□□ -0.32
TY4A-JP47023 SRB2YHR041C 633 nt13□□□□□ -0.33
TY4A-JP47023 YJR018WYJR018W 363 nt12.97□□□□□ -0.33
TY4A-JP47023 PUN1YLR414C 792 nt12.97□□□□□ -0.33
TY4A-JP47023 YJR120WYJR120W 351 nt12.93□□□□□ -0.34
TY4A-JP47023 YAL037C-BYAL037C-B 975 nt12.9□□□□□ -0.34
TY4A-JP47023 YOR139CYOR139C 393 nt12.8□□□□□ -0.36
TY4A-JP47023 PTC2YER089C 1395 nt12.79□□□□□ -0.36
TY4A-JP47023 WWM1YFL010C 636 nt12.72□□□□□ -0.37
TY4A-JP47023 NVJ2YPR091C 2313 nt12.7□□□□□ -0.38
TY4A-JP47023 HOM6YJR139C 1080 nt12.69□□□□□ -0.38
TY4A-JP47023 BUD23YCR047C 828 nt12.68□□□□□ -0.38
TY4A-JP47023 RPP2BYDR382W 333 nt12.68□□□□□ -0.38
TY4A-JP47023 YGR021WYGR021W 873 nt12.66□□□□□ -0.38
TY4A-JP47023 MNP1YGL068W 585 nt12.62□□□□□ -0.39
TY4A-JP47023 BDF1YLR399C 2061 nt12.61□□□□□ -0.39
TY4A-JP47023 NAB2YGL122C 1578 nt12.6□□□□□ -0.39
TY4A-JP47023 BDH2YAL061W 1254 nt12.54□□□□□ -0.4
TY4A-JP47023 NPL3YDR432W 1245 nt12.53□□□□□ -0.4
TY4A-JP47023 YFL021C-AYFL021C-A 855 nt12.51□□□□□ -0.41
TY4A-JP47023 FIS1YIL065C 468 nt12.51□□□□□ -0.41
TY4A-JP47023 RPM1RPM1 483 nt12.5□□□□□ -0.41
TY4A-JP47023 INM2YDR287W 879 nt12.48□□□□□ -0.41
TY4A-JP47023 RKM5YLR137W 1104 nt12.48□□□□□ -0.41
TY4A-JP47023 DAL1YIR027C 1383 nt12.47□□□□□ -0.41
TY4A-JP47023 YOL037CYOL037C 354 nt12.46□□□□□ -0.41
TY4A-JP47023 TAT1YBR069C 1860 nt12.44□□□□□ -0.42
TY4A-JP47023 MEP2YNL142W 1500 nt12.42□□□□□ -0.42
TY4A-JP47023 LSM3YLR438C-A 270 nt12.41□□□□□ -0.42
TY4A-JP47023 YJL225CYJL225C 5277 nt12.39□□□□□ -0.43
TY4A-JP47023 YBL100CYBL100C 315 nt12.38□□□□□ -0.43
TY4A-JP47023 PAC11YDR488C 1602 nt12.37□□□□□ -0.43
TY4A-JP47023 PHO4YFR034C 939 nt12.37□□□□□ -0.43
TY4A-JP47023 FPR4YLR449W 1179 nt12.35□□□□□ -0.43
TY4A-JP47023 tM(CAU)CtM(CAU)C 72 nt12.27□□□□□ -0.45
TY4A-JP47023 IMT4tM(CAU)E 72 nt12.27□□□□□ -0.45
TY4A-JP47023 IMT3tM(CAU)J3 72 nt12.27□□□□□ -0.45
TY4A-JP47023 IMT1tM(CAU)O1 72 nt12.27□□□□□ -0.45
TY4A-JP47023 IMT2tM(CAU)P 72 nt12.27□□□□□ -0.45
TY4A-JP47023 FUN26YAL022C 1554 nt12.26□□□□□ -0.45
TY4A-JP47023 TRM9YML014W 840 nt12.22□□□□□ -0.45
Retrieved 100 of 7,029 protein–RNA pairs in 408.1 ms